RNA–Protein interactions for RNA: YHR121W

LSM12, Transcript of Protein of unknown function that may function in RNA processing, yeast

Gene LSM12, Length 564 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSM12	YHR121W	LUC7	Q07508	261 aa	Predicted RBP	4.69	□□□□□ -1.66
LSM12	YHR121W	HEM2	P05373	342 aa		4.68	□□□□□ -1.66
LSM12	YHR121W	SGV1	P23293	657 aa	Known RBP	4.68	□□□□□ -1.66
LSM12	YHR121W	SWH1	P35845	1188 aa		4.68	□□□□□ -1.66
LSM12	YHR121W	PMU1	P36069	295 aa		4.68	□□□□□ -1.66
LSM12	YHR121W	YHR210C	P38893	341 aa		4.68	□□□□□ -1.66
LSM12	YHR121W	SHO1	P40073	367 aa		4.68	□□□□□ -1.66
LSM12	YHR121W	MSC1	Q03104	513 aa		4.68	□□□□□ -1.66
LSM12	YHR121W	MRPL51	Q06090	140 aa	Predicted RBP	4.68	□□□□□ -1.66
LSM12	YHR121W	YDL057W	Q07379	328 aa		4.68	□□□□□ -1.66
LSM12	YHR121W	FMP40	Q08968	688 aa	Predicted RBP	4.68	□□□□□ -1.66
LSM12	YHR121W	RKR1	Q04781	1562 aa		4.68	□□□□□ -1.66
LSM12	YHR121W	TIF5	P38431	405 aa	Known RBP	4.67	□□□□□ -1.66
LSM12	YHR121W	IVY1	Q04934	453 aa		4.67	□□□□□ -1.66
LSM12	YHR121W	BNA5	Q05979	453 aa		4.67	□□□□□ -1.66
LSM12	YHR121W	YPL272C	Q08984	517 aa		4.67	□□□□□ -1.66
LSM12	YHR121W	EXO70	P19658	623 aa		4.66	□□□□□ -1.66
LSM12	YHR121W	YCR007C	P25354	239 aa		4.66	□□□□□ -1.66
LSM12	YHR121W	FRE1	P32791	686 aa		4.66	□□□□□ -1.66
LSM12	YHR121W	UBP11	P36026	717 aa		4.66	□□□□□ -1.66
LSM12	YHR121W	ALG8	P40351	577 aa		4.66	□□□□□ -1.66
LSM12	YHR121W	SHE10	P53075	577 aa		4.66	□□□□□ -1.66
LSM12	YHR121W	SLD5	Q03406	294 aa		4.66	□□□□□ -1.66
LSM12	YHR121W	OPY2	Q06810	360 aa		4.66	□□□□□ -1.66
LSM12	YHR121W	RPL19A	P0CX82	189 aa	Known RBP	4.65	□□□□□ -1.67
LSM12	YHR121W	RPL19B	P0CX83	189 aa	Predicted RBP	4.65	□□□□□ -1.67
LSM12	YHR121W	CHS3	P29465	1165 aa		4.65	□□□□□ -1.67
LSM12	YHR121W	VPS74	Q06385	345 aa		4.65	□□□□□ -1.67
LSM12	YHR121W	YOR365C	Q08844	703 aa		4.65	□□□□□ -1.67
LSM12	YHR121W	NCE102	Q12207	173 aa	RIP-Chip data	4.65	□□□□□ -1.67	not detected
LSM12	YHR121W	LSP1	Q12230	341 aa	Known RBP	4.65	□□□□□ -1.67
LSM12	YHR121W	CHD1	P32657	1468 aa		4.64	□□□□□ -1.67
LSM12	YHR121W	KAR3	P17119	729 aa		4.64	□□□□□ -1.67
LSM12	YHR121W	POL4	P25615	582 aa		4.64	□□□□□ -1.67
LSM12	YHR121W	DPB3	P27344	201 aa		4.64	□□□□□ -1.67
LSM12	YHR121W	IRC15	Q02733	499 aa		4.64	□□□□□ -1.67
LSM12	YHR121W	YCK1	P23291	538 aa		4.63	□□□□□ -1.67
LSM12	YHR121W	PUT3	P25502	979 aa	Predicted RBP	4.63	□□□□□ -1.67
LSM12	YHR121W	YCR022C	P25620	114 aa		4.63	□□□□□ -1.67
LSM12	YHR121W	ALK1	P43633	760 aa	Known RBP	4.63	□□□□□ -1.67
LSM12	YHR121W	SPE4	Q12455	300 aa		4.63	□□□□□ -1.67
LSM12	YHR121W	YBR126W-A	Q8TGU7	68 aa		4.63	□□□□□ -1.67
LSM12	YHR121W	YCL021W-A	Q96VH3	125 aa		4.63	□□□□□ -1.67
LSM12	YHR121W	HSH49	Q99181	213 aa	Predicted RBP	4.63	□□□□□ -1.67
LSM12	YHR121W	RAD52	P06778	471 aa	Known RBP	4.62	□□□□□ -1.67
LSM12	YHR121W	PMR1	P13586	950 aa		4.62	□□□□□ -1.67
LSM12	YHR121W	ART10	P18634	518 aa	Known RBP	4.62	□□□□□ -1.67
LSM12	YHR121W	UTR4	P32626	227 aa		4.62	□□□□□ -1.67
LSM12	YHR121W	LYS14	P40971	790 aa		4.62	□□□□□ -1.67
LSM12	YHR121W	ELP2	P42935	788 aa		4.62	□□□□□ -1.67
LSM12	YHR121W	MSO1	P53604	210 aa	Known RBP	4.62	□□□□□ -1.67
LSM12	YHR121W	WSC2	P53832	503 aa		4.62	□□□□□ -1.67
LSM12	YHR121W	IOC4	Q04213	475 aa		4.62	□□□□□ -1.67
LSM12	YHR121W	NOP58	Q12499	511 aa	Known RBP	4.62	□□□□□ -1.67
LSM12	YHR121W	YPK9	Q12697	1472 aa		4.62	□□□□□ -1.67
LSM12	YHR121W	LCL3	P53153	274 aa		4.61	□□□□□ -1.67
LSM12	YHR121W	RTS3	P53289	263 aa		4.61	□□□□□ -1.67
LSM12	YHR121W	THP1	Q08231	455 aa		4.61	□□□□□ -1.67
LSM12	YHR121W	HNT3	Q08702	217 aa		4.61	□□□□□ -1.67
LSM12	YHR121W	HUA2	Q12134	243 aa		4.61	□□□□□ -1.67
LSM12	YHR121W	SKI3	P17883	1432 aa	Known RBP	4.61	□□□□□ -1.67
LSM12	YHR121W	NTE1	Q04958	1679 aa		4.61	□□□□□ -1.67
LSM12	YHR121W	PEP4	P07267	405 aa	Known RBP	4.6	□□□□□ -1.67
LSM12	YHR121W	LPD1	P09624	499 aa	Known RBP	4.6	□□□□□ -1.67
LSM12	YHR121W	TRX2	P22803	104 aa	Known RBP	4.6	□□□□□ -1.67
LSM12	YHR121W	SHP1	P34223	423 aa		4.6	□□□□□ -1.67
LSM12	YHR121W	HAT2	P39984	401 aa		4.6	□□□□□ -1.67
LSM12	YHR121W	ALG5	P40350	334 aa		4.6	□□□□□ -1.67
LSM12	YHR121W	VID30	P53076	958 aa		4.6	□□□□□ -1.67
LSM12	YHR121W	DRN1	P53255	507 aa	Known RBP	4.6	□□□□□ -1.67
LSM12	YHR121W	GPI1	P53306	609 aa		4.6	□□□□□ -1.67
LSM12	YHR121W	HEL2	Q05580	639 aa	Known RBP	4.6	□□□□□ -1.67
LSM12	YHR121W	SUC2	P00724	532 aa		4.59	□□□□□ -1.67
LSM12	YHR121W	CDC16	P09798	840 aa		4.59	□□□□□ -1.67
LSM12	YHR121W	LDB16	P25587	256 aa		4.59	□□□□□ -1.67
LSM12	YHR121W	SEF1	P34228	1148 aa		4.59	□□□□□ -1.67
LSM12	YHR121W	MRPL4	P36517	319 aa		4.59	□□□□□ -1.67
LSM12	YHR121W	MEP3	P53390	489 aa		4.59	□□□□□ -1.67
LSM12	YHR121W	TOF2	Q02208	771 aa		4.59	□□□□□ -1.67
LSM12	YHR121W	PDR15	Q04182	1529 aa	Known RBP	4.59	□□□□□ -1.67
LSM12	YHR121W	PHO92	Q06390	306 aa		4.59	□□□□□ -1.67
LSM12	YHR121W	CTF3	Q12748	733 aa		4.59	□□□□□ -1.67
LSM12	YHR121W	UFD4	P33202	1483 aa		4.58	□□□□□ -1.68
LSM12	YHR121W	MRP13	P12686	339 aa		4.58	□□□□□ -1.68
LSM12	YHR121W	EST1	P17214	699 aa	Predicted RBP	4.58	□□□□□ -1.68
LSM12	YHR121W	SSH4	P32343	579 aa		4.58	□□□□□ -1.68
LSM12	YHR121W	TIF3	P34167	436 aa	Known RBP	4.58	□□□□□ -1.68
LSM12	YHR121W	BNA4	P38169	460 aa		4.58	□□□□□ -1.68
LSM12	YHR121W	DUO1	P53168	247 aa	Known RBP	4.58	□□□□□ -1.68
LSM12	YHR121W	IPI3	P53877	555 aa		4.58	□□□□□ -1.68
LSM12	YHR121W	XRN1	P22147	1528 aa	Known RBP	4.57	□□□□□ -1.68
LSM12	YHR121W	FUN19	P28003	413 aa	Predicted RBP	4.57	□□□□□ -1.68
LSM12	YHR121W	PAP1	P29468	568 aa	Known RBP	4.57	□□□□□ -1.68
LSM12	YHR121W	DED81	P38707	554 aa	Known RBP	4.57	□□□□□ -1.68
LSM12	YHR121W	YEL068C	P39977	110 aa		4.57	□□□□□ -1.68
LSM12	YHR121W	GWT1	P47026	490 aa		4.57	□□□□□ -1.68
LSM12	YHR121W	ADD37	Q03233	198 aa		4.57	□□□□□ -1.68
LSM12	YHR121W	YKU80	Q04437	629 aa		4.57	□□□□□ -1.68
LSM12	YHR121W	CPR1	P14832	162 aa	Known RBP	4.56	□□□□□ -1.68
LSM12	YHR121W	DUG2	P38149	878 aa		4.56	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 41.2 ms