RNA–Protein interactions for RNA: YHR099W

TRA1, Transcript of Subunit of SAGA and NuA4 histone acetyltransferase complexes, yeastyeast

Gene TRA1, Length 11,235 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRA1YHR099W PRM9P39551 298 aa2.4□□□□□ -2.02
TRA1YHR099W YER189WP40104 122 aa2.4□□□□□ -2.02
TRA1YHR099W XKS1P42826 600 aa2.4□□□□□ -2.02
TRA1YHR099W PEF1P53238 335 aa2.4□□□□□ -2.02
TRA1YHR099W ATF2P53296 535 aa2.4□□□□□ -2.02
TRA1YHR099W SLD5Q03406 294 aa2.4□□□□□ -2.02
TRA1YHR099W BTS1Q12051 335 aa2.4□□□□□ -2.02
TRA1YHR099W YOR342CQ12182 319 aa2.4□□□□□ -2.02
TRA1YHR099W FBA1P14540 359 aaKnown RBP2.4□□□□□ -2.02
TRA1YHR099W OAR1P35731 278 aa2.4□□□□□ -2.02
TRA1YHR099W PCS60P38137 543 aaKnown RBP RIP-Chip data2.4□□□□□ -2.02not detected
TRA1YHR099W BIT61P47041 543 aa2.4□□□□□ -2.02
TRA1YHR099W SAM50P53969 484 aa2.4□□□□□ -2.02
TRA1YHR099W RPS15Q01855 142 aaKnown RBP2.4□□□□□ -2.02
TRA1YHR099W PEX25Q02969 394 aa2.4□□□□□ -2.02
TRA1YHR099W YDR090CQ03193 310 aa2.4□□□□□ -2.02
TRA1YHR099W MFG1Q07684 458 aa2.4□□□□□ -2.02
TRA1YHR099W DIN7Q12086 430 aa2.4□□□□□ -2.02
TRA1YHR099W IDP1P21954 428 aaKnown RBP2.4□□□□□ -2.02
TRA1YHR099W MRM1P25270 412 aa2.4□□□□□ -2.02
TRA1YHR099W TRR1P29509 319 aaKnown RBP2.4□□□□□ -2.02
TRA1YHR099W NDT80P38830 627 aa2.4□□□□□ -2.02
TRA1YHR099W TMA108P40462 946 aa2.4□□□□□ -2.02
TRA1YHR099W FET5P43561 622 aa2.4□□□□□ -2.02
TRA1YHR099W RSM26P47141 266 aa2.4□□□□□ -2.02
TRA1YHR099W MGA1P53050 456 aa2.4□□□□□ -2.02
TRA1YHR099W YOL075CQ08234 1294 aa2.4□□□□□ -2.02
TRA1YHR099W GRX6Q12438 231 aa2.4□□□□□ -2.02
TRA1YHR099W YOR131CQ12486 218 aa2.4□□□□□ -2.02
TRA1YHR099W AI5_BETAQ9ZZX0 354 aa2.4□□□□□ -2.02
TRA1YHR099W PDE2P06776 526 aa2.4□□□□□ -2.03
TRA1YHR099W TOP3P13099 656 aa2.4□□□□□ -2.03
TRA1YHR099W AFT1P22149 690 aa2.4□□□□□ -2.03
TRA1YHR099W URE2P23202 354 aaKnown RBP2.4□□□□□ -2.03
TRA1YHR099W RSC6P25632 483 aa2.4□□□□□ -2.03
TRA1YHR099W YKT6P36015 200 aaKnown RBP2.4□□□□□ -2.03
TRA1YHR099W NTC20P38302 140 aaPredicted RBP2.4□□□□□ -2.03
TRA1YHR099W KIC1P38692 1080 aa2.4□□□□□ -2.03
TRA1YHR099W CCT3P39077 534 aaKnown RBP2.4□□□□□ -2.03
TRA1YHR099W FOL2P51601 243 aaKnown RBP2.4□□□□□ -2.03
TRA1YHR099W ESBP6P53918 673 aa2.4□□□□□ -2.03
TRA1YHR099W REC102Q02721 264 aa2.4□□□□□ -2.03
TRA1YHR099W SEC13Q04491 297 aaKnown RBP2.4□□□□□ -2.03
TRA1YHR099W YPR1Q12458 312 aa2.4□□□□□ -2.03
TRA1YHR099W TSC3Q3E790 80 aa2.4□□□□□ -2.03
TRA1YHR099W SPS2P08459 502 aa2.4□□□□□ -2.03
TRA1YHR099W KGD1P20967 1014 aaKnown RBP2.4□□□□□ -2.03
TRA1YHR099W AAT2P23542 418 aaKnown RBP2.4□□□□□ -2.03
TRA1YHR099W RDH54P38086 958 aa2.4□□□□□ -2.03
TRA1YHR099W PRK1P40494 810 aa2.4□□□□□ -2.03
TRA1YHR099W MMM1P41800 426 aa2.4□□□□□ -2.03
TRA1YHR099W PSP2P50109 593 aaKnown RBP2.4□□□□□ -2.03
TRA1YHR099W FLC3P53121 802 aa2.4□□□□□ -2.03
TRA1YHR099W RBG2P53295 368 aaKnown RBP2.4□□□□□ -2.03
TRA1YHR099W ISA1Q07821 250 aaPredicted RBP2.4□□□□□ -2.03
TRA1YHR099W LEA1Q08963 238 aaPredicted RBP2.4□□□□□ -2.03
TRA1YHR099W GET3Q12154 354 aaKnown RBP2.4□□□□□ -2.03
TRA1YHR099W YOR022CQ12204 715 aa2.4□□□□□ -2.03
TRA1YHR099W UBX3Q12229 455 aa2.4□□□□□ -2.03
TRA1YHR099W SEC7P11075 2009 aaKnown RBP2.4□□□□□ -2.03
TRA1YHR099W GRX2P17695 143 aaKnown RBP2.4□□□□□ -2.03
TRA1YHR099W HRR25P29295 494 aaKnown RBP2.4□□□□□ -2.03
TRA1YHR099W STB6P36085 766 aa2.4□□□□□ -2.03
TRA1YHR099W SRO77P38163 1010 aa2.4□□□□□ -2.03
TRA1YHR099W SBE22P38814 852 aa2.4□□□□□ -2.03
TRA1YHR099W DUN1P39009 513 aa2.4□□□□□ -2.03
TRA1YHR099W RPL13BP40212 199 aaKnown RBP2.4□□□□□ -2.03
TRA1YHR099W TOS3P43637 560 aa2.4□□□□□ -2.03
TRA1YHR099W SIP4P46954 829 aa2.4□□□□□ -2.03
TRA1YHR099W YJL016WP47072 561 aa2.4□□□□□ -2.03
TRA1YHR099W YJR039WP47107 1121 aa2.4□□□□□ -2.03
TRA1YHR099W EAF6P47128 113 aa2.4□□□□□ -2.03
TRA1YHR099W MCM22P47167 239 aa2.4□□□□□ -2.03
TRA1YHR099W DUO1P53168 247 aaKnown RBP2.4□□□□□ -2.03
TRA1YHR099W PDR16P53860 351 aaKnown RBP2.4□□□□□ -2.03
TRA1YHR099W NMA111P53920 997 aa2.4□□□□□ -2.03
TRA1YHR099W CAB1Q04430 367 aa2.4□□□□□ -2.03
TRA1YHR099W YLR225CQ05948 407 aaKnown RBP2.4□□□□□ -2.03
TRA1YHR099W LIP2Q06005 328 aa2.4□□□□□ -2.03
TRA1YHR099W BRE4Q07660 1125 aa2.4□□□□□ -2.03
TRA1YHR099W DDC1Q08949 612 aa2.4□□□□□ -2.03
TRA1YHR099W SRO7Q12038 1033 aa2.4□□□□□ -2.03
TRA1YHR099W RPL13AQ12690 199 aaPredicted RBP2.4□□□□□ -2.03
TRA1YHR099W HAP3P13434 144 aa2.4□□□□□ -2.03
TRA1YHR099W DAP2P18962 818 aa2.4□□□□□ -2.03
TRA1YHR099W YKL107WP34251 309 aa2.4□□□□□ -2.03
TRA1YHR099W YKL222CP35995 705 aa2.4□□□□□ -2.03
TRA1YHR099W UBP11P36026 717 aa2.4□□□□□ -2.03
TRA1YHR099W NVJ1P38881 321 aa2.4□□□□□ -2.03
TRA1YHR099W POP2P39008 433 aa2.4□□□□□ -2.03
TRA1YHR099W UTP7P40055 554 aaKnown RBP2.4□□□□□ -2.03
TRA1YHR099W YIL161WP40449 235 aaKnown RBP2.4□□□□□ -2.03
TRA1YHR099W ALR2P43553 858 aa2.4□□□□□ -2.03
TRA1YHR099W AGX1P43567 385 aa2.4□□□□□ -2.03
TRA1YHR099W AVT1P47082 602 aa2.4□□□□□ -2.03
TRA1YHR099W DAM1P53267 343 aa2.4□□□□□ -2.03
TRA1YHR099W NRD1P53617 575 aaKnown RBP RIP-Chip data2.4□□□□□ -2.03not detected
TRA1YHR099W ATG16Q03818 150 aa2.4□□□□□ -2.03
TRA1YHR099W MUS81Q04149 632 aaPredicted RBP2.4□□□□□ -2.03
TRA1YHR099W ROY1Q04847 553 aa2.4□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms