RNA–Protein interactions for RNA: YHR055C

CUP1-2, Transcript of Metallothionein, yeastyeast

Gene CUP1-2, Length 186 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP1-2YHR055C SPC110P32380 944 aa3.85□□□□□ -1.79
CUP1-2YHR055C TCD2P36101 447 aaKnown RBP3.85□□□□□ -1.79
CUP1-2YHR055C YBP1P38315 674 aa3.85□□□□□ -1.79
CUP1-2YHR055C MSR1P38714 643 aa3.85□□□□□ -1.79
CUP1-2YHR055C YFR016CP43597 1233 aaKnown RBP3.85□□□□□ -1.79
CUP1-2YHR055C UPF3P48412 387 aaKnown RBP3.85□□□□□ -1.79
CUP1-2YHR055C MRX6P48564 524 aa3.85□□□□□ -1.79
CUP1-2YHR055C YDL186WP48568 277 aa3.85□□□□□ -1.79
CUP1-2YHR055C SLD5Q03406 294 aa3.85□□□□□ -1.79
CUP1-2YHR055C MRPL51Q06090 140 aaPredicted RBP3.85□□□□□ -1.79
CUP1-2YHR055C SYO1Q07395 620 aa3.85□□□□□ -1.79
CUP1-2YHR055C LSP1Q12230 341 aaKnown RBP3.85□□□□□ -1.79
CUP1-2YHR055C RAD52P06778 471 aaKnown RBP3.84□□□□□ -1.79
CUP1-2YHR055C RPL20AP0CX23 172 aaKnown RBP3.84□□□□□ -1.79
CUP1-2YHR055C RPL20BP0CX24 172 aaPredicted RBP3.84□□□□□ -1.79
CUP1-2YHR055C CBS1P14066 229 aa3.84□□□□□ -1.79
CUP1-2YHR055C PRP16P15938 1071 aaPredicted RBP3.84□□□□□ -1.79
CUP1-2YHR055C YME1P32795 747 aa3.84□□□□□ -1.79
CUP1-2YHR055C BNA4P38169 460 aa3.84□□□□□ -1.79
CUP1-2YHR055C KRE9P39005 276 aa3.84□□□□□ -1.79
CUP1-2YHR055C RMD8P43620 662 aa3.84□□□□□ -1.79
CUP1-2YHR055C SVL3Q03088 825 aaKnown RBP3.84□□□□□ -1.79
CUP1-2YHR055C RLI1Q03195 608 aaKnown RBP3.84□□□□□ -1.79
CUP1-2YHR055C FIN1Q03898 291 aa3.84□□□□□ -1.79
CUP1-2YHR055C COQ9Q05779 260 aa3.84□□□□□ -1.79
CUP1-2YHR055C VPS74Q06385 345 aa3.84□□□□□ -1.79
CUP1-2YHR055C AVL9Q12500 764 aa3.84□□□□□ -1.79
CUP1-2YHR055C GCN4P03069 281 aa3.83□□□□□ -1.8
CUP1-2YHR055C GAL80P04387 435 aa3.83□□□□□ -1.8
CUP1-2YHR055C AMD1P15274 810 aaKnown RBP3.83□□□□□ -1.8
CUP1-2YHR055C OLE1P21147 510 aaKnown RBP3.83□□□□□ -1.8
CUP1-2YHR055C UTR4P32626 227 aa3.83□□□□□ -1.8
CUP1-2YHR055C FRE1P32791 686 aa3.83□□□□□ -1.8
CUP1-2YHR055C MTC4P38335 694 aaKnown RBP3.83□□□□□ -1.8
CUP1-2YHR055C RPR2P40571 144 aa3.83□□□□□ -1.8
CUP1-2YHR055C ELP2P42935 788 aa3.83□□□□□ -1.8
CUP1-2YHR055C YJL132WP47014 750 aa3.83□□□□□ -1.8
CUP1-2YHR055C GIS2P53849 153 aaKnown RBP RIP-Chip data3.83□□□□□ -1.8not detected
CUP1-2YHR055C IRC15Q02733 499 aa3.83□□□□□ -1.8
CUP1-2YHR055C BNA5Q05979 453 aa3.83□□□□□ -1.8
CUP1-2YHR055C RLM1Q12224 676 aa3.83□□□□□ -1.8
CUP1-2YHR055C BRR1Q99177 341 aaPredicted RBP3.83□□□□□ -1.8
CUP1-2YHR055C DFR1P07807 211 aaKnown RBP RIP-Chip data3.82□□□□□ -1.8not detected
CUP1-2YHR055C HSC82P15108 705 aaKnown RBP3.82□□□□□ -1.8
CUP1-2YHR055C MCK1P21965 375 aaKnown RBP3.82□□□□□ -1.8
CUP1-2YHR055C ATS1P31386 333 aa3.82□□□□□ -1.8
CUP1-2YHR055C LOS1P33418 1100 aaPredicted RBP3.82□□□□□ -1.8
CUP1-2YHR055C DUG2P38149 878 aa3.82□□□□□ -1.8
CUP1-2YHR055C TCM62P38228 572 aaKnown RBP3.82□□□□□ -1.8
CUP1-2YHR055C YHR218WP38899 603 aa3.82□□□□□ -1.8
CUP1-2YHR055C TIF4631P39935 952 aaKnown RBP3.82□□□□□ -1.8
CUP1-2YHR055C SHO1P40073 367 aa3.82□□□□□ -1.8
CUP1-2YHR055C COS10P52924 374 aa3.82□□□□□ -1.8
CUP1-2YHR055C DRN1P53255 507 aaKnown RBP3.82□□□□□ -1.8
CUP1-2YHR055C GPI1P53306 609 aa3.82□□□□□ -1.8
CUP1-2YHR055C PHO92Q06390 306 aa3.82□□□□□ -1.8
CUP1-2YHR055C YDL121CQ07541 149 aa3.82□□□□□ -1.8
CUP1-2YHR055C AYT1Q12226 474 aa3.82□□□□□ -1.8
CUP1-2YHR055C SUC2P00724 532 aa3.81□□□□□ -1.8
CUP1-2YHR055C AGA1P32323 725 aa3.81□□□□□ -1.8
CUP1-2YHR055C ALG8P40351 577 aa3.81□□□□□ -1.8
CUP1-2YHR055C SGN1P40561 250 aaKnown RBP RIP-Chip data3.81□□□□□ -1.8not detected
CUP1-2YHR055C ZPR1P53303 486 aaKnown RBP3.81□□□□□ -1.8
CUP1-2YHR055C VPS75P53853 264 aa3.81□□□□□ -1.8
CUP1-2YHR055C RPT6Q01939 405 aaKnown RBP3.81□□□□□ -1.8
CUP1-2YHR055C FOB1O13329 566 aa3.8□□□□□ -1.8
CUP1-2YHR055C ATR1P13090 542 aa3.8□□□□□ -1.8
CUP1-2YHR055C PRP2P20095 876 aaPredicted RBP3.8□□□□□ -1.8
CUP1-2YHR055C OCA4P25366 362 aa3.8□□□□□ -1.8
CUP1-2YHR055C MSN2P33748 704 aa3.8□□□□□ -1.8
CUP1-2YHR055C PMU1P36069 295 aa3.8□□□□□ -1.8
CUP1-2YHR055C TUL1P36096 758 aa3.8□□□□□ -1.8
CUP1-2YHR055C DOT5P40553 215 aa3.8□□□□□ -1.8
CUP1-2YHR055C AIM22P47051 409 aa3.8□□□□□ -1.8
CUP1-2YHR055C HEF3P53978 1044 aaKnown RBP3.8□□□□□ -1.8
CUP1-2YHR055C RAV1P47104 1357 aa3.79□□□□□ -1.8
CUP1-2YHR055C COR1P07256 457 aa3.79□□□□□ -1.8
CUP1-2YHR055C CBS2P14905 389 aa3.79□□□□□ -1.8
CUP1-2YHR055C ELO2P25358 347 aa3.79□□□□□ -1.8
CUP1-2YHR055C PRD1P25375 712 aa3.79□□□□□ -1.8
CUP1-2YHR055C IMP2'P32351 346 aa3.79□□□□□ -1.8
CUP1-2YHR055C WBP1P33767 430 aaKnown RBP3.79□□□□□ -1.8
CUP1-2YHR055C SRO77P38163 1010 aa3.79□□□□□ -1.8
CUP1-2YHR055C RBS1Q05672 457 aaKnown RBP3.79□□□□□ -1.8
CUP1-2YHR055C YBR225WP38321 900 aa3.78□□□□□ -1.8
CUP1-2YHR055C MBB1P39534 108 aa3.78□□□□□ -1.8
CUP1-2YHR055C ERP2P39704 215 aa3.78□□□□□ -1.8
CUP1-2YHR055C PET130P47065 347 aa3.78□□□□□ -1.8
CUP1-2YHR055C CAF130P53280 1122 aaPredicted RBP3.78□□□□□ -1.8
CUP1-2YHR055C YDR239CQ03780 787 aa3.78□□□□□ -1.8
CUP1-2YHR055C RPC11Q04307 110 aaPredicted RBP3.78□□□□□ -1.8
CUP1-2YHR055C CFT2Q12102 859 aaPredicted RBP3.78□□□□□ -1.8
CUP1-2YHR055C HEM2P05373 342 aa3.77□□□□□ -1.81
CUP1-2YHR055C GLK1P17709 500 aaKnown RBP3.77□□□□□ -1.81
CUP1-2YHR055C YCR022CP25620 114 aa3.77□□□□□ -1.81
CUP1-2YHR055C RSM22P36056 628 aa3.77□□□□□ -1.81
CUP1-2YHR055C YBR139WP38109 508 aa3.77□□□□□ -1.81
CUP1-2YHR055C CST26P38226 397 aa3.77□□□□□ -1.81
CUP1-2YHR055C MUM2P38236 366 aa3.77□□□□□ -1.81
CUP1-2YHR055C IDP2P41939 412 aa3.77□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms