RNA–Protein interactions for RNA: YHR039C-A

VMA10, Transcript of Subunit G of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA10, Length 345 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA10	YHR039C-A	GSH2	Q08220	491 aa		3.13	□□□□□ -1.91
VMA10	YHR039C-A	UBX3	Q12229	455 aa		3.13	□□□□□ -1.91
VMA10	YHR039C-A	ISA2	Q12425	185 aa		3.13	□□□□□ -1.91
VMA10	YHR039C-A	COR1	P07256	457 aa		3.12	□□□□□ -1.91
VMA10	YHR039C-A	PEP5	P12868	1029 aa		3.12	□□□□□ -1.91
VMA10	YHR039C-A	RPL3	P14126	387 aa	Known RBP	3.12	□□□□□ -1.91
VMA10	YHR039C-A	SUI2	P20459	304 aa	Known RBP	3.12	□□□□□ -1.91
VMA10	YHR039C-A	REC107	P21651	314 aa		3.12	□□□□□ -1.91
VMA10	YHR039C-A	RPS2	P25443	254 aa	Known RBP	3.12	□□□□□ -1.91
VMA10	YHR039C-A	SNC1	P31109	117 aa		3.12	□□□□□ -1.91
VMA10	YHR039C-A	RML2	P32611	393 aa		3.12	□□□□□ -1.91
VMA10	YHR039C-A	YKL023W	P36103	277 aa	Known RBP	3.12	□□□□□ -1.91
VMA10	YHR039C-A	TCM62	P38228	572 aa	Known RBP	3.12	□□□□□ -1.91
VMA10	YHR039C-A	MBB1	P39534	108 aa		3.12	□□□□□ -1.91
VMA10	YHR039C-A	TIF4631	P39935	952 aa	Known RBP	3.12	□□□□□ -1.91
VMA10	YHR039C-A	VRG4	P40107	337 aa		3.12	□□□□□ -1.91
VMA10	YHR039C-A	BUD32	P53323	261 aa		3.12	□□□□□ -1.91
VMA10	YHR039C-A	SMM1	P53720	384 aa	Known RBP	3.12	□□□□□ -1.91
VMA10	YHR039C-A	DUG3	P53871	357 aa		3.12	□□□□□ -1.91
VMA10	YHR039C-A	MDG1	P53885	366 aa		3.12	□□□□□ -1.91
VMA10	YHR039C-A	HEF3	P53978	1044 aa	Known RBP	3.12	□□□□□ -1.91
VMA10	YHR039C-A	EKI1	Q03764	534 aa		3.12	□□□□□ -1.91
VMA10	YHR039C-A	SOV1	Q04748	898 aa		3.12	□□□□□ -1.91
VMA10	YHR039C-A	SNA4	Q07549	140 aa		3.12	□□□□□ -1.91
VMA10	YHR039C-A	THP1	Q08231	455 aa		3.12	□□□□□ -1.91
VMA10	YHR039C-A	RDR1	Q08904	546 aa		3.12	□□□□□ -1.91
VMA10	YHR039C-A	RAD52	P06778	471 aa	Known RBP	3.11	□□□□□ -1.91
VMA10	YHR039C-A	RPL42A	P0CX27	106 aa	Known RBP	3.11	□□□□□ -1.91
VMA10	YHR039C-A	RPL42B	P0CX28	106 aa	Known RBP	3.11	□□□□□ -1.91
VMA10	YHR039C-A	PPH22	P23595	377 aa		3.11	□□□□□ -1.91
VMA10	YHR039C-A	CLB1	P24868	471 aa		3.11	□□□□□ -1.91
VMA10	YHR039C-A	SPB1	P25582	841 aa	Predicted RBP	3.11	□□□□□ -1.91
VMA10	YHR039C-A	IDH2	P28241	369 aa	Known RBP	3.11	□□□□□ -1.91
VMA10	YHR039C-A	ATO2	P32907	282 aa		3.11	□□□□□ -1.91
VMA10	YHR039C-A	HCS1	P34243	683 aa		3.11	□□□□□ -1.91
VMA10	YHR039C-A	BLI1	P35727	113 aa		3.11	□□□□□ -1.91
VMA10	YHR039C-A	TUL1	P36096	758 aa		3.11	□□□□□ -1.91
VMA10	YHR039C-A	KEL1	P38853	1164 aa	Known RBP	3.11	□□□□□ -1.91
VMA10	YHR039C-A	YMR147W	P40218	223 aa	Known RBP	3.11	□□□□□ -1.91
VMA10	YHR039C-A	YIL152W	P40455	235 aa		3.11	□□□□□ -1.91
VMA10	YHR039C-A	MNP1	P53163	194 aa	Predicted RBP	3.11	□□□□□ -1.91
VMA10	YHR039C-A	SHR3	Q02774	210 aa		3.11	□□□□□ -1.91
VMA10	YHR039C-A	KAP120	Q02932	1032 aa		3.11	□□□□□ -1.91
VMA10	YHR039C-A	IZH1	Q03419	316 aa		3.11	□□□□□ -1.91
VMA10	YHR039C-A	SXM1	Q04175	944 aa	Known RBP	3.11	□□□□□ -1.91
VMA10	YHR039C-A	AIM32	Q04689	311 aa		3.11	□□□□□ -1.91
VMA10	YHR039C-A	ECI1	Q05871	280 aa		3.11	□□□□□ -1.91
VMA10	YHR039C-A	AFI1	Q99222	893 aa		3.11	□□□□□ -1.91
VMA10	YHR039C-A	SUC2	P00724	532 aa		3.1	□□□□□ -1.91
VMA10	YHR039C-A	HSP82	P02829	709 aa	Known RBP	3.1	□□□□□ -1.91
VMA10	YHR039C-A	CPR2	P23285	205 aa		3.1	□□□□□ -1.91
VMA10	YHR039C-A	GID7	P25569	745 aa		3.1	□□□□□ -1.91
VMA10	YHR039C-A	ERV1	P27882	189 aa		3.1	□□□□□ -1.91
VMA10	YHR039C-A	YME2	P32843	850 aa		3.1	□□□□□ -1.91
VMA10	YHR039C-A	MSN2	P33748	704 aa		3.1	□□□□□ -1.91
VMA10	YHR039C-A	YPK3	P38070	525 aa		3.1	□□□□□ -1.91
VMA10	YHR039C-A	DUG2	P38149	878 aa		3.1	□□□□□ -1.91
VMA10	YHR039C-A	PCL6	P40038	420 aa		3.1	□□□□□ -1.91
VMA10	YHR039C-A	RTS2	P40962	232 aa		3.1	□□□□□ -1.91
VMA10	YHR039C-A	YJR154W	P47181	346 aa		3.1	□□□□□ -1.91
VMA10	YHR039C-A	TCB2	P48231	1178 aa		3.1	□□□□□ -1.91
VMA10	YHR039C-A	YGR149W	P48236	432 aa		3.1	□□□□□ -1.91
VMA10	YHR039C-A	YGL108C	P53139	140 aa		3.1	□□□□□ -1.91
VMA10	YHR039C-A	YNL234W	P53857	426 aa		3.1	□□□□□ -1.91
VMA10	YHR039C-A	YNL181W	P53878	407 aa		3.1	□□□□□ -1.91
VMA10	YHR039C-A	ESBP6	P53918	673 aa		3.1	□□□□□ -1.91
VMA10	YHR039C-A	RHO4	Q00246	291 aa		3.1	□□□□□ -1.91
VMA10	YHR039C-A	YPL014W	Q02606	381 aa		3.1	□□□□□ -1.91
VMA10	YHR039C-A	SSK1	Q07084	712 aa		3.1	□□□□□ -1.91
VMA10	YHR039C-A	FMP45	Q07651	309 aa		3.1	□□□□□ -1.91
VMA10	YHR039C-A	SRL1	Q08673	210 aa		3.1	□□□□□ -1.91
VMA10	YHR039C-A	RRD2	Q12461	358 aa		3.1	□□□□□ -1.91
VMA10	YHR039C-A	RAV1	P47104	1357 aa		3.1	□□□□□ -1.91
VMA10	YHR039C-A	YFL068W	P0CX99	160 aa		3.09	□□□□□ -1.91
VMA10	YHR039C-A	YLL066W-A	P0CY00	160 aa		3.09	□□□□□ -1.91
VMA10	YHR039C-A	YLL067W-A	P0CY01	160 aa		3.09	□□□□□ -1.91
VMA10	YHR039C-A	RAD14	P28519	371 aa		3.09	□□□□□ -1.91
VMA10	YHR039C-A	YIM1	P28625	365 aa		3.09	□□□□□ -1.91
VMA10	YHR039C-A	PDR3	P33200	976 aa		3.09	□□□□□ -1.91
VMA10	YHR039C-A	SPC34	P36131	295 aa		3.09	□□□□□ -1.91
VMA10	YHR039C-A	PIM1	P36775	1133 aa		3.09	□□□□□ -1.91
VMA10	YHR039C-A	BNA4	P38169	460 aa		3.09	□□□□□ -1.91
VMA10	YHR039C-A	IAH1	P41734	238 aa		3.09	□□□□□ -1.91
VMA10	YHR039C-A	ZIM17	P42844	174 aa		3.09	□□□□□ -1.91
VMA10	YHR039C-A	FET5	P43561	622 aa		3.09	□□□□□ -1.91
VMA10	YHR039C-A	ALT2	P52892	507 aa		3.09	□□□□□ -1.91
VMA10	YHR039C-A	ART5	P53244	586 aa	Known RBP	3.09	□□□□□ -1.91
VMA10	YHR039C-A	ZPR1	P53303	486 aa	Known RBP	3.09	□□□□□ -1.91
VMA10	YHR039C-A	LSC1	P53598	329 aa	Known RBP	3.09	□□□□□ -1.91
VMA10	YHR039C-A	VPS9	P54787	451 aa		3.09	□□□□□ -1.91
VMA10	YHR039C-A	CIK1	Q01649	594 aa		3.09	□□□□□ -1.91
VMA10	YHR039C-A	YMR034C	Q05131	434 aa	Predicted RBP	3.09	□□□□□ -1.91
VMA10	YHR039C-A	DON1	Q05610	365 aa		3.09	□□□□□ -1.91
VMA10	YHR039C-A	DIC1	Q06143	298 aa		3.09	□□□□□ -1.91
VMA10	YHR039C-A	MLH2	Q07980	695 aa		3.09	□□□□□ -1.91
VMA10	YHR039C-A	SIL1	Q08199	421 aa		3.09	□□□□□ -1.91
VMA10	YHR039C-A	DSE3	Q08729	430 aa		3.09	□□□□□ -1.91
VMA10	YHR039C-A	APL5	Q08951	932 aa	Known RBP	3.09	□□□□□ -1.91
VMA10	YHR039C-A	RHO2	P06781	192 aa		3.08	□□□□□ -1.92
VMA10	YHR039C-A	SPS4	P09937	338 aa		3.08	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 22.6 ms