RNA–Protein interactions for RNA: YGR193C

PDX1, Transcript of E3-binding protein of the mitochondrial pyruvate dehydrogenase complex, yeastyeast

Gene PDX1, Length 1,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDX1YGR193C ADH4P10127 382 aa3.59□□□□□ -1.83
PDX1YGR193C CBS1P14066 229 aa3.59□□□□□ -1.83
PDX1YGR193C ARO3P14843 370 aaKnown RBP3.59□□□□□ -1.83
PDX1YGR193C EST1P17214 699 aaPredicted RBP3.59□□□□□ -1.83
PDX1YGR193C KGD2P19262 463 aaPredicted RBP3.59□□□□□ -1.83
PDX1YGR193C SIR1P21691 654 aa3.59□□□□□ -1.83
PDX1YGR193C APA2P22108 325 aa3.59□□□□□ -1.83
PDX1YGR193C ARO4P32449 370 aaKnown RBP3.59□□□□□ -1.83
PDX1YGR193C SRP102P36057 244 aaPredicted RBP3.59□□□□□ -1.83
PDX1YGR193C MRPL17P36528 281 aa3.59□□□□□ -1.83
PDX1YGR193C UME6P39001 836 aa3.59□□□□□ -1.83
PDX1YGR193C JHD1P40034 492 aa3.59□□□□□ -1.83
PDX1YGR193C YER186CP40101 306 aa3.59□□□□□ -1.83
PDX1YGR193C ATM1P40416 690 aa3.59□□□□□ -1.83
PDX1YGR193C ASG1P40467 964 aa3.59□□□□□ -1.83
PDX1YGR193C SYG1P40528 902 aa3.59□□□□□ -1.83
PDX1YGR193C LYS14P40971 790 aa3.59□□□□□ -1.83
PDX1YGR193C GTO1P48239 356 aa3.59□□□□□ -1.83
PDX1YGR193C CTF18P49956 741 aa3.59□□□□□ -1.83
PDX1YGR193C YGL138CP53122 345 aa3.59□□□□□ -1.83
PDX1YGR193C TIM21P53220 239 aa3.59□□□□□ -1.83
PDX1YGR193C DRN1P53255 507 aaKnown RBP3.59□□□□□ -1.83
PDX1YGR193C YGR117CP53270 476 aa3.59□□□□□ -1.83
PDX1YGR193C RCF2P53721 224 aa3.59□□□□□ -1.83
PDX1YGR193C YNL134CP53912 376 aaKnown RBP3.59□□□□□ -1.83
PDX1YGR193C ADE16P54113 591 aaKnown RBP3.59□□□□□ -1.83
PDX1YGR193C MOT3P54785 490 aaKnown RBP3.59□□□□□ -1.83
PDX1YGR193C YMR114CQ04471 368 aaKnown RBP3.59□□□□□ -1.83
PDX1YGR193C YMR226CQ05016 267 aaKnown RBP3.59□□□□□ -1.83
PDX1YGR193C THI7Q05998 598 aa3.59□□□□□ -1.83
PDX1YGR193C SPO77Q06134 477 aa3.59□□□□□ -1.83
PDX1YGR193C TFC6Q06339 672 aa3.59□□□□□ -1.83
PDX1YGR193C ATG23Q06671 453 aa3.59□□□□□ -1.83
PDX1YGR193C THI3Q07471 609 aa3.59□□□□□ -1.83
PDX1YGR193C SDO1Q07953 250 aaKnown RBP3.59□□□□□ -1.83
PDX1YGR193C GSH2Q08220 491 aa3.59□□□□□ -1.83
PDX1YGR193C MUM3Q08750 479 aa3.59□□□□□ -1.83
PDX1YGR193C RSA1Q08932 381 aa3.59□□□□□ -1.83
PDX1YGR193C YPL272CQ08984 517 aa3.59□□□□□ -1.83
PDX1YGR193C MED2Q12124 431 aa3.59□□□□□ -1.83
PDX1YGR193C UBX3Q12229 455 aa3.59□□□□□ -1.83
PDX1YGR193C MDM20Q12387 796 aaKnown RBP3.59□□□□□ -1.83
PDX1YGR193C HMS1Q12398 434 aa3.59□□□□□ -1.83
PDX1YGR193C SET6Q12529 373 aa3.59□□□□□ -1.83
PDX1YGR193C HBN1Q96VH4 193 aa3.59□□□□□ -1.83
PDX1YGR193C APM4Q99186 491 aa3.59□□□□□ -1.83
PDX1YGR193C REP1P03871 373 aa3.58□□□□□ -1.84
PDX1YGR193C ARG4P04076 463 aaPredicted RBP3.58□□□□□ -1.84
PDX1YGR193C GPH1P06738 902 aaKnown RBP3.58□□□□□ -1.84
PDX1YGR193C RPL1AP0CX43 217 aaKnown RBP3.58□□□□□ -1.84
PDX1YGR193C RPL1BP0CX44 217 aaKnown RBP3.58□□□□□ -1.84
PDX1YGR193C RPL35AP0CX84 120 aaKnown RBP3.58□□□□□ -1.84
PDX1YGR193C RPL35BP0CX85 120 aaKnown RBP3.58□□□□□ -1.84
PDX1YGR193C CDC24P11433 854 aaPredicted RBP3.58□□□□□ -1.84
PDX1YGR193C SRV2P17555 526 aaKnown RBP3.58□□□□□ -1.84
PDX1YGR193C PTP1P25044 335 aa3.58□□□□□ -1.84
PDX1YGR193C CTR86P25355 563 aa3.58□□□□□ -1.84
PDX1YGR193C PET18P25362 215 aa3.58□□□□□ -1.84
PDX1YGR193C IMG1P25626 169 aa3.58□□□□□ -1.84
PDX1YGR193C YCR051WP25631 222 aa3.58□□□□□ -1.84
PDX1YGR193C IMG2P25642 146 aaPredicted RBP3.58□□□□□ -1.84
PDX1YGR193C SPO23P33757 523 aa3.58□□□□□ -1.84
PDX1YGR193C YKL070WP36087 169 aa3.58□□□□□ -1.84
PDX1YGR193C ALY1P36117 915 aa3.58□□□□□ -1.84
PDX1YGR193C DBP7P36120 742 aaKnown RBP3.58□□□□□ -1.84
PDX1YGR193C RFT1P38206 574 aaPredicted RBP3.58□□□□□ -1.84
PDX1YGR193C KSP1P38691 1029 aaKnown RBP3.58□□□□□ -1.84
PDX1YGR193C RRP3P38712 501 aaKnown RBP3.58□□□□□ -1.84
PDX1YGR193C YHR045WP38775 560 aa3.58□□□□□ -1.84
PDX1YGR193C LYS9P38999 446 aa3.58□□□□□ -1.84
PDX1YGR193C SEN34P39707 275 aa3.58□□□□□ -1.84
PDX1YGR193C PZF1P39933 429 aa3.58□□□□□ -1.84
PDX1YGR193C RFC4P40339 323 aaKnown RBP3.58□□□□□ -1.84
PDX1YGR193C YIL001WP40560 513 aa3.58□□□□□ -1.84
PDX1YGR193C TFG2P41896 400 aaPredicted RBP3.58□□□□□ -1.84
PDX1YGR193C CAF16P43569 289 aa3.58□□□□□ -1.84
PDX1YGR193C YFR018CP43599 363 aa3.58□□□□□ -1.84
PDX1YGR193C YJR056CP47115 236 aa3.58□□□□□ -1.84
PDX1YGR193C PUS4P48567 403 aaKnown RBP3.58□□□□□ -1.84
PDX1YGR193C DUO1P53168 247 aaKnown RBP3.58□□□□□ -1.84
PDX1YGR193C YGR127WP53275 312 aa3.58□□□□□ -1.84
PDX1YGR193C OKP1P53298 406 aa3.58□□□□□ -1.84
PDX1YGR193C ZPR1P53303 486 aaKnown RBP3.58□□□□□ -1.84
PDX1YGR193C CUS2P53830 285 aaPredicted RBP3.58□□□□□ -1.84
PDX1YGR193C AQR1P53943 586 aa3.58□□□□□ -1.84
PDX1YGR193C VPS64Q03944 604 aa3.58□□□□□ -1.84
PDX1YGR193C MUS81Q04149 632 aaPredicted RBP3.58□□□□□ -1.84
PDX1YGR193C URH1Q04179 340 aa3.58□□□□□ -1.84
PDX1YGR193C SNO4Q04902 237 aa3.58□□□□□ -1.84
PDX1YGR193C SKG3Q06315 1026 aa3.58□□□□□ -1.84
PDX1YGR193C CUR1Q06469 252 aa3.58□□□□□ -1.84
PDX1YGR193C YPR147CQ06522 304 aaKnown RBP3.58□□□□□ -1.84
PDX1YGR193C MCM21Q06675 368 aa3.58□□□□□ -1.84
PDX1YGR193C FMP45Q07651 309 aa3.58□□□□□ -1.84
PDX1YGR193C REX4Q08237 289 aa3.58□□□□□ -1.84
PDX1YGR193C HSP33Q08914 237 aaKnown RBP3.58□□□□□ -1.84
PDX1YGR193C LEA1Q08963 238 aaPredicted RBP3.58□□□□□ -1.84
PDX1YGR193C HSP32Q08992 237 aa3.58□□□□□ -1.84
PDX1YGR193C YPR027CQ12079 277 aa3.58□□□□□ -1.84
PDX1YGR193C MSL5Q12186 476 aaKnown RBP RIP-Chip data3.58□□□□□ -1.84not detected
Retrieved 100 of 5,963 RNA–protein pairs in 74.9 ms