RNA–Protein interactions for RNA: YGR143W

SKN1, Transcript of Protein involved in sphingolipid biosynthesis, yeastyeast

Gene SKN1, Length 2,316 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKN1YGR143W DHR2P36009 735 aaPredicted RBP5.79□□□□□ -1.48
SKN1YGR143W KAE1P36132 386 aa5.79□□□□□ -1.48
SKN1YGR143W PPS1P38148 807 aa5.79□□□□□ -1.48
SKN1YGR143W YHR045WP38775 560 aa5.79□□□□□ -1.48
SKN1YGR143W TRM5P38793 499 aa5.79□□□□□ -1.48
SKN1YGR143W PTC7P38797 343 aa5.79□□□□□ -1.48
SKN1YGR143W YHR182WP38870 785 aa5.79□□□□□ -1.48
SKN1YGR143W CRG1P38892 291 aaRIP-Chip data5.79□□□□□ -1.48not detected
SKN1YGR143W SUR2P38992 349 aa5.79□□□□□ -1.48
SKN1YGR143W IRC5P43610 853 aa5.79□□□□□ -1.48
SKN1YGR143W CCC1P47818 322 aa5.79□□□□□ -1.48
SKN1YGR143W NBP1P52919 319 aaPredicted RBP5.79□□□□□ -1.48
SKN1YGR143W LSC2P53312 427 aa5.79□□□□□ -1.48
SKN1YGR143W BRE5P53741 515 aaKnown RBP5.79□□□□□ -1.48
SKN1YGR143W YNL115CP53925 644 aa5.79□□□□□ -1.48
SKN1YGR143W MTD1Q02046 320 aaKnown RBP5.79□□□□□ -1.48
SKN1YGR143W RSN1Q03516 953 aa5.79□□□□□ -1.48
SKN1YGR143W YDR387CQ04162 555 aa5.79□□□□□ -1.48
SKN1YGR143W BUR2Q05949 395 aa5.79□□□□□ -1.48
SKN1YGR143W YPR147CQ06522 304 aaKnown RBP5.79□□□□□ -1.48
SKN1YGR143W BDS1Q08347 646 aa5.79□□□□□ -1.48
SKN1YGR143W HOS1Q12214 470 aa5.79□□□□□ -1.48
SKN1YGR143W MED1Q12321 566 aa5.79□□□□□ -1.48
SKN1YGR143W SPS4P09937 338 aa5.78□□□□□ -1.48
SKN1YGR143W NFT1P0CE68 1218 aa5.78□□□□□ -1.48
SKN1YGR143W TCP1P12612 559 aaKnown RBP5.78□□□□□ -1.48
SKN1YGR143W IDI1P15496 288 aa5.78□□□□□ -1.48
SKN1YGR143W PPH22P23595 377 aa5.78□□□□□ -1.48
SKN1YGR143W FPS1P23900 669 aa5.78□□□□□ -1.48
SKN1YGR143W RNA15P25299 296 aaPredicted RBP5.78□□□□□ -1.48
SKN1YGR143W CTS1P29029 562 aa5.78□□□□□ -1.48
SKN1YGR143W RAD54P32863 898 aa5.78□□□□□ -1.48
SKN1YGR143W RPF2P36160 344 aaKnown RBP5.78□□□□□ -1.48
SKN1YGR143W ADE17P38009 592 aaKnown RBP5.78□□□□□ -1.48
SKN1YGR143W MAL32P38158 584 aa5.78□□□□□ -1.48
SKN1YGR143W FTH1P38310 465 aa5.78□□□□□ -1.48
SKN1YGR143W YFL034WP43564 1073 aa5.78□□□□□ -1.48
SKN1YGR143W MAL12P53341 584 aa5.78□□□□□ -1.48
SKN1YGR143W ERG5P54781 538 aa5.78□□□□□ -1.48
SKN1YGR143W PEX10Q05568 337 aa5.78□□□□□ -1.48
SKN1YGR143W HDA3Q06623 655 aa5.78□□□□□ -1.48
SKN1YGR143W YDL129WQ07555 291 aa5.78□□□□□ -1.48
SKN1YGR143W COS7Q07788 383 aa5.78□□□□□ -1.48
SKN1YGR143W SDO1Q07953 250 aaKnown RBP5.78□□□□□ -1.48
SKN1YGR143W UAF30Q08747 228 aa5.78□□□□□ -1.48
SKN1YGR143W VAM3Q12241 283 aa5.78□□□□□ -1.48
SKN1YGR143W RPN6Q12377 434 aa5.78□□□□□ -1.48
SKN1YGR143W YLR358CO13565 187 aa5.77□□□□□ -1.49
SKN1YGR143W SAM1P10659 382 aaKnown RBP5.77□□□□□ -1.49
SKN1YGR143W RAD18P10862 487 aa5.77□□□□□ -1.49
SKN1YGR143W AAT2P23542 418 aaKnown RBP5.77□□□□□ -1.49
SKN1YGR143W ILV6P25605 309 aaKnown RBP5.77□□□□□ -1.49
SKN1YGR143W NDI1P32340 513 aa5.77□□□□□ -1.49
SKN1YGR143W PHA2P32452 334 aa5.77□□□□□ -1.49
SKN1YGR143W MSS1P32559 526 aaPredicted RBP5.77□□□□□ -1.49
SKN1YGR143W TSC10P38342 320 aa5.77□□□□□ -1.49
SKN1YGR143W NDT80P38830 627 aa5.77□□□□□ -1.49
SKN1YGR143W HRB1P38922 454 aaKnown RBP RIP-Chip data5.77□□□□□ -1.49not detected
SKN1YGR143W MMF1P40185 145 aaKnown RBP5.77□□□□□ -1.49
SKN1YGR143W VHR1P40522 640 aa5.77□□□□□ -1.49
SKN1YGR143W UBX4P54730 416 aa5.77□□□□□ -1.49
SKN1YGR143W OSH6Q02201 448 aa5.77□□□□□ -1.49
SKN1YGR143W CSN9Q03981 162 aa5.77□□□□□ -1.49
SKN1YGR143W MYO5Q04439 1219 aaKnown RBP5.77□□□□□ -1.49
SKN1YGR143W CIA1Q05583 330 aa5.77□□□□□ -1.49
SKN1YGR143W BOP2Q06150 570 aa5.77□□□□□ -1.49
SKN1YGR143W TFC6Q06339 672 aa5.77□□□□□ -1.49
SKN1YGR143W GUP2Q08929 609 aa5.77□□□□□ -1.49
SKN1YGR143W GET3Q12154 354 aaKnown RBP5.77□□□□□ -1.49
SKN1YGR143W AI5_BETAQ9ZZX0 354 aa5.77□□□□□ -1.49
SKN1YGR143W AI5_ALPHAQ9ZZX1 630 aa5.77□□□□□ -1.49
SKN1YGR143W RAD10P06838 210 aa5.77□□□□□ -1.49
SKN1YGR143W NUC1P08466 329 aa5.77□□□□□ -1.49
SKN1YGR143W MAK31P23059 88 aa5.77□□□□□ -1.49
SKN1YGR143W UTR4P32626 227 aa5.77□□□□□ -1.49
SKN1YGR143W CTF13P35203 478 aa5.77□□□□□ -1.49
SKN1YGR143W RMA1P36001 430 aaKnown RBP5.77□□□□□ -1.49
SKN1YGR143W POA1P38218 177 aa5.77□□□□□ -1.49
SKN1YGR143W SIF2P38262 535 aa5.77□□□□□ -1.49
SKN1YGR143W PHO88P38264 188 aaPredicted RBP5.77□□□□□ -1.49
SKN1YGR143W BZZ1P38822 633 aa5.77□□□□□ -1.49
SKN1YGR143W AIM18P38884 321 aa5.77□□□□□ -1.49
SKN1YGR143W GPB2P39717 880 aa5.77□□□□□ -1.49
SKN1YGR143W RPN3P40016 523 aaKnown RBP5.77□□□□□ -1.49
SKN1YGR143W PSF2P40359 213 aa5.77□□□□□ -1.49
SKN1YGR143W CAF16P43569 289 aa5.77□□□□□ -1.49
SKN1YGR143W VOA1P53262 265 aa5.77□□□□□ -1.49
SKN1YGR143W SLI1P53304 468 aa5.77□□□□□ -1.49
SKN1YGR143W SCS7Q03529 384 aa5.77□□□□□ -1.49
SKN1YGR143W DUS4Q06063 367 aa5.77□□□□□ -1.49
SKN1YGR143W YLR455WQ06188 304 aa5.77□□□□□ -1.49
SKN1YGR143W YDL086WQ07505 273 aa5.77□□□□□ -1.49
SKN1YGR143W FYV7Q12247 151 aa5.77□□□□□ -1.49
SKN1YGR143W ZRT2Q12436 422 aa5.77□□□□□ -1.49
SKN1YGR143W GAL10P04397 699 aa5.76□□□□□ -1.49
SKN1YGR143W ILV2P07342 687 aaKnown RBP5.76□□□□□ -1.49
SKN1YGR143W MRP1P10662 321 aaKnown RBP5.76□□□□□ -1.49
SKN1YGR143W YIM1P28625 365 aa5.76□□□□□ -1.49
SKN1YGR143W HXT1P32465 570 aa5.76□□□□□ -1.49
SKN1YGR143W PET309P32522 965 aaPredicted RBP5.76□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms