RNA–Protein interactions for RNA: YGR140W

CBF2, Transcript of Essential kinetochore protein, yeastyeast

Gene CBF2, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF2YGR140W PFA5Q03289 374 aa2.28□□□□□ -2.04
CBF2YGR140W YDR179W-AQ03983 463 aa2.28□□□□□ -2.04
CBF2YGR140W RGC1Q06108 1083 aaKnown RBP2.28□□□□□ -2.04
CBF2YGR140W ARO10Q06408 635 aa2.28□□□□□ -2.04
CBF2YGR140W ARV1Q06541 321 aa2.28□□□□□ -2.04
CBF2YGR140W LCB4Q12246 624 aa2.28□□□□□ -2.04
CBF2YGR140W CHD1P32657 1468 aa2.28□□□□□ -2.04
CBF2YGR140W CAR1P00812 333 aaKnown RBP2.28□□□□□ -2.04
CBF2YGR140W CBP2P03874 630 aaPredicted RBP2.28□□□□□ -2.04
CBF2YGR140W CDC37P06101 506 aaKnown RBP2.28□□□□□ -2.04
CBF2YGR140W SIR3P06701 978 aa2.28□□□□□ -2.04
CBF2YGR140W CBP1P07252 654 aa2.28□□□□□ -2.04
CBF2YGR140W MRP2P10663 115 aaPredicted RBP2.28□□□□□ -2.04
CBF2YGR140W WHI2P12611 486 aa2.28□□□□□ -2.04
CBF2YGR140W DAP2P18962 818 aa2.28□□□□□ -2.04
CBF2YGR140W UBA1P22515 1024 aaKnown RBP2.28□□□□□ -2.04
CBF2YGR140W AMD2P22580 549 aa2.28□□□□□ -2.04
CBF2YGR140W SNU114P36048 1008 aaKnown RBP2.28□□□□□ -2.04
CBF2YGR140W NUP133P36161 1157 aa2.28□□□□□ -2.04
CBF2YGR140W ZTA1P38230 334 aaKnown RBP2.28□□□□□ -2.04
CBF2YGR140W VHC1P38329 1120 aa2.28□□□□□ -2.04
CBF2YGR140W PHM8P40025 321 aa2.28□□□□□ -2.04
CBF2YGR140W SER3P40054 469 aa2.28□□□□□ -2.04
CBF2YGR140W YIP5P53108 310 aa2.28□□□□□ -2.04
CBF2YGR140W MPP6P53725 186 aaPredicted RBP2.28□□□□□ -2.04
CBF2YGR140W YLR297WQ05899 129 aa2.28□□□□□ -2.04
CBF2YGR140W YPL272CQ08984 517 aa2.28□□□□□ -2.04
CBF2YGR140W YDL176WQ12027 708 aa2.28□□□□□ -2.04
CBF2YGR140W YRM1Q12340 786 aa2.28□□□□□ -2.04
CBF2YGR140W APC2Q12440 853 aa2.28□□□□□ -2.04
CBF2YGR140W DFG16Q99234 619 aa2.28□□□□□ -2.04
CBF2YGR140W LAM4P38800 1345 aa2.28□□□□□ -2.04
CBF2YGR140W RPS13P05756 151 aaKnown RBP2.28□□□□□ -2.05
CBF2YGR140W GPH1P06738 902 aaKnown RBP2.28□□□□□ -2.05
CBF2YGR140W STE3P06783 470 aa2.28□□□□□ -2.05
CBF2YGR140W RAP1P11938 827 aa2.28□□□□□ -2.05
CBF2YGR140W KGD1P20967 1014 aaKnown RBP2.28□□□□□ -2.05
CBF2YGR140W GLG1P36143 616 aa2.28□□□□□ -2.05
CBF2YGR140W MNL1P38888 796 aa2.28□□□□□ -2.05
CBF2YGR140W SSO2P39926 295 aa2.28□□□□□ -2.05
CBF2YGR140W OPT1P40897 799 aa2.28□□□□□ -2.05
CBF2YGR140W VMA13P41807 478 aaKnown RBP2.28□□□□□ -2.05
CBF2YGR140W ELP2P42935 788 aa2.28□□□□□ -2.05
CBF2YGR140W NMD5P46970 1048 aa2.28□□□□□ -2.05
CBF2YGR140W ASN2P49090 572 aaKnown RBP2.28□□□□□ -2.05
CBF2YGR140W KEL2P50090 882 aa2.28□□□□□ -2.05
CBF2YGR140W YGL114WP53134 725 aa2.28□□□□□ -2.05
CBF2YGR140W ERG26P53199 349 aaKnown RBP2.28□□□□□ -2.05
CBF2YGR140W ATG4P53867 494 aa2.28□□□□□ -2.05
CBF2YGR140W OCA2P53949 197 aa2.28□□□□□ -2.05
CBF2YGR140W PRO2P54885 456 aaKnown RBP2.28□□□□□ -2.05
CBF2YGR140W SMA1Q02651 245 aa2.28□□□□□ -2.05
CBF2YGR140W ABZ2Q03266 374 aa2.28□□□□□ -2.05
CBF2YGR140W WAR1Q03631 944 aa2.28□□□□□ -2.05
CBF2YGR140W AIM39Q08223 395 aa2.28□□□□□ -2.05
CBF2YGR140W MRPL23Q12487 163 aaPredicted RBP2.28□□□□□ -2.05
CBF2YGR140W GAL4P04386 881 aa2.27□□□□□ -2.05
CBF2YGR140W MSS116P15424 664 aaKnown RBP2.27□□□□□ -2.05
CBF2YGR140W RNR3P21672 869 aaKnown RBP2.27□□□□□ -2.05
CBF2YGR140W BEM1P29366 551 aa2.27□□□□□ -2.05
CBF2YGR140W PMI40P29952 429 aaKnown RBP2.27□□□□□ -2.05
CBF2YGR140W HIR2P32480 875 aa2.27□□□□□ -2.05
CBF2YGR140W MRP4P32902 394 aa2.27□□□□□ -2.05
CBF2YGR140W CAB3P36076 571 aa2.27□□□□□ -2.05
CBF2YGR140W MIC60P36112 540 aa2.27□□□□□ -2.05
CBF2YGR140W PEX18P38855 283 aa2.27□□□□□ -2.05
CBF2YGR140W PCF11P39081 626 aaPredicted RBP2.27□□□□□ -2.05
CBF2YGR140W RPN11P43588 306 aaKnown RBP2.27□□□□□ -2.05
CBF2YGR140W COQ6P53318 479 aa2.27□□□□□ -2.05
CBF2YGR140W YNL146WP53906 100 aa2.27□□□□□ -2.05
CBF2YGR140W RPS15Q01855 142 aaKnown RBP2.27□□□□□ -2.05
CBF2YGR140W YDR132CQ03900 495 aa2.27□□□□□ -2.05
CBF2YGR140W ATC1Q04005 294 aa2.27□□□□□ -2.05
CBF2YGR140W SMA2Q04658 369 aa2.27□□□□□ -2.05
CBF2YGR140W ZPS1Q12512 249 aa2.27□□□□□ -2.05
CBF2YGR140W BRR1Q99177 341 aaPredicted RBP2.27□□□□□ -2.05
CBF2YGR140W COR1P07256 457 aa2.27□□□□□ -2.05
CBF2YGR140W PUT2P07275 575 aa2.27□□□□□ -2.05
CBF2YGR140W ARO3P14843 370 aaKnown RBP2.27□□□□□ -2.05
CBF2YGR140W MSS51P32335 436 aa2.27□□□□□ -2.05
CBF2YGR140W GMH1P36125 273 aa2.27□□□□□ -2.05
CBF2YGR140W TCD1P38756 429 aa2.27□□□□□ -2.05
CBF2YGR140W NDC80P40460 691 aa2.27□□□□□ -2.05
CBF2YGR140W ULP2P40537 1034 aaPredicted RBP2.27□□□□□ -2.05
CBF2YGR140W POP1P41812 875 aa2.27□□□□□ -2.05
CBF2YGR140W YFL066CP43538 392 aa2.27□□□□□ -2.05
CBF2YGR140W LAM5P43560 674 aa2.27□□□□□ -2.05
CBF2YGR140W ECM27P47144 725 aa2.27□□□□□ -2.05
CBF2YGR140W YGL108CP53139 140 aa2.27□□□□□ -2.05
CBF2YGR140W RSM23Q01163 450 aa2.27□□□□□ -2.05
CBF2YGR140W RNT1Q02555 471 aa2.27□□□□□ -2.05
CBF2YGR140W YMR178WQ03219 274 aaKnown RBP2.27□□□□□ -2.05
CBF2YGR140W YMR310CQ04867 317 aaPredicted RBP2.27□□□□□ -2.05
CBF2YGR140W LEA1Q08963 238 aaPredicted RBP2.27□□□□□ -2.05
CBF2YGR140W GLE1Q12315 538 aa2.27□□□□□ -2.05
CBF2YGR140W TRP3P00937 484 aa2.26□□□□□ -2.05
CBF2YGR140W STE11P23561 717 aa2.26□□□□□ -2.05
CBF2YGR140W YSP3P25036 478 aa2.26□□□□□ -2.05
CBF2YGR140W PET18P25362 215 aa2.26□□□□□ -2.05
CBF2YGR140W FAA1P30624 700 aaKnown RBP2.26□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 22.6 ms