RNA–Protein interactions for RNA: YGL228W

SHE10, Transcript of Protein involved in outer spore wall assembly, yeastyeast

Gene SHE10, Length 1,734 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE10YGL228W PLB3Q08108 686 aa5.33□□□□□ -1.56
SHE10YGL228W PFA4Q12006 378 aa5.33□□□□□ -1.56
SHE10YGL228W MCD1Q12158 566 aa5.33□□□□□ -1.56
SHE10YGL228W RRP42Q12277 265 aaPredicted RBP5.33□□□□□ -1.56
SHE10YGL228W RGT2Q12300 763 aa5.33□□□□□ -1.56
SHE10YGL228W JLP1Q12358 412 aa5.33□□□□□ -1.56
SHE10YGL228W MHT1Q12525 324 aa5.33□□□□□ -1.56
SHE10YGL228W YKL018C-AQ3E7A7 99 aa5.33□□□□□ -1.56
SHE10YGL228W SRN2Q99176 213 aa5.33□□□□□ -1.56
SHE10YGL228W SAS5Q99314 248 aa5.33□□□□□ -1.56
SHE10YGL228W POL2P21951 2222 aaKnown RBP5.32□□□□□ -1.56
SHE10YGL228W ARG81P05085 880 aa5.32□□□□□ -1.56
SHE10YGL228W RSR1P13856 272 aa5.32□□□□□ -1.56
SHE10YGL228W POL30P15873 258 aaKnown RBP5.32□□□□□ -1.56
SHE10YGL228W PDC5P16467 563 aaKnown RBP5.32□□□□□ -1.56
SHE10YGL228W PHO81P17442 1178 aa5.32□□□□□ -1.56
SHE10YGL228W CCA1P21269 546 aa5.32□□□□□ -1.56
SHE10YGL228W EMC3P36039 253 aa5.32□□□□□ -1.56
SHE10YGL228W DED81P38707 554 aaKnown RBP5.32□□□□□ -1.56
SHE10YGL228W RRP3P38712 501 aaKnown RBP5.32□□□□□ -1.56
SHE10YGL228W FMO1P38866 432 aa5.32□□□□□ -1.56
SHE10YGL228W GIM4P40005 111 aaKnown RBP5.32□□□□□ -1.56
SHE10YGL228W TIF34P40217 347 aaKnown RBP5.32□□□□□ -1.56
SHE10YGL228W MAM33P40513 266 aa5.32□□□□□ -1.56
SHE10YGL228W RLP7P40693 322 aaKnown RBP5.32□□□□□ -1.56
SHE10YGL228W NUP85P46673 744 aa5.32□□□□□ -1.56
SHE10YGL228W YJR030CP47101 745 aa5.32□□□□□ -1.56
SHE10YGL228W NAS6P50086 228 aa5.32□□□□□ -1.56
SHE10YGL228W MDM34P53083 459 aa5.32□□□□□ -1.56
SHE10YGL228W YNL260CP53846 198 aa5.32□□□□□ -1.56
SHE10YGL228W MPS1P54199 764 aa5.32□□□□□ -1.56
SHE10YGL228W PRP38Q00723 242 aaPredicted RBP5.32□□□□□ -1.56
SHE10YGL228W CTK1Q03957 528 aaKnown RBP5.32□□□□□ -1.56
SHE10YGL228W YDR444WQ04093 687 aa5.32□□□□□ -1.56
SHE10YGL228W YDR124WQ04608 324 aa5.32□□□□□ -1.56
SHE10YGL228W ASA1Q06822 443 aa5.32□□□□□ -1.56
SHE10YGL228W YLL032CQ07834 825 aaKnown RBP RIP-Chip data5.32□□□□□ -1.56not detected
SHE10YGL228W YPR011CQ12251 326 aa5.32□□□□□ -1.56
SHE10YGL228W ATP2P00830 511 aaKnown RBP5.31□□□□□ -1.56
SHE10YGL228W RPL24AP04449 155 aaKnown RBP5.31□□□□□ -1.56
SHE10YGL228W LEU4P06208 619 aaKnown RBP5.31□□□□□ -1.56
SHE10YGL228W SGV1P23293 657 aaKnown RBP5.31□□□□□ -1.56
SHE10YGL228W HCM1P25364 564 aa5.31□□□□□ -1.56
SHE10YGL228W PHO91P27514 894 aa5.31□□□□□ -1.56
SHE10YGL228W HXT4P32467 576 aa5.31□□□□□ -1.56
SHE10YGL228W FRE2P36033 711 aa5.31□□□□□ -1.56
SHE10YGL228W SRX1P36077 127 aa5.31□□□□□ -1.56
SHE10YGL228W YKR078WP36158 585 aaKnown RBP5.31□□□□□ -1.56
SHE10YGL228W BMT2P38278 337 aa5.31□□□□□ -1.56
SHE10YGL228W MED8P38304 223 aa5.31□□□□□ -1.56
SHE10YGL228W YPT35P38815 214 aaKnown RBP5.31□□□□□ -1.56
SHE10YGL228W HXT6P39003 570 aaKnown RBP5.31□□□□□ -1.56
SHE10YGL228W HXT7P39004 570 aa5.31□□□□□ -1.56
SHE10YGL228W AZF1P41696 914 aa5.31□□□□□ -1.56
SHE10YGL228W ART5P53244 586 aaKnown RBP5.31□□□□□ -1.56
SHE10YGL228W MET31Q03081 177 aa5.31□□□□□ -1.56
SHE10YGL228W DYN3Q04949 312 aa5.31□□□□□ -1.56
SHE10YGL228W YMR034CQ05131 434 aaPredicted RBP5.31□□□□□ -1.56
SHE10YGL228W BSC2Q05611 235 aa5.31□□□□□ -1.56
SHE10YGL228W BCP1Q06338 283 aa5.31□□□□□ -1.56
SHE10YGL228W YLR413WQ06689 675 aa5.31□□□□□ -1.56
SHE10YGL228W UAF30Q08747 228 aa5.31□□□□□ -1.56
SHE10YGL228W MCH5Q08777 521 aa5.31□□□□□ -1.56
SHE10YGL228W TFB4Q12004 338 aa5.31□□□□□ -1.56
SHE10YGL228W IOC2Q12072 812 aa5.31□□□□□ -1.56
SHE10YGL228W GPR1Q12361 961 aa5.31□□□□□ -1.56
SHE10YGL228W YCL012CQ8J0M4 134 aa5.31□□□□□ -1.56
SHE10YGL228W HRP1Q99383 534 aaKnown RBP5.31□□□□□ -1.56
SHE10YGL228W MSB2P32334 1306 aa5.31□□□□□ -1.56
SHE10YGL228W ATP6P00854 259 aa5.31□□□□□ -1.56
SHE10YGL228W HTA2P04912 132 aa5.31□□□□□ -1.56
SHE10YGL228W GBP2P25555 427 aaKnown RBP RIP-Chip data5.31□□□□□ -1.56not detected
SHE10YGL228W HES1P35843 434 aa5.31□□□□□ -1.56
SHE10YGL228W GTO1P48239 356 aa5.31□□□□□ -1.56
SHE10YGL228W COS12P53053 380 aa5.31□□□□□ -1.56
SHE10YGL228W ATP25Q03153 612 aa5.31□□□□□ -1.56
SHE10YGL228W VHS1Q03785 461 aa5.31□□□□□ -1.56
SHE10YGL228W RTT10Q08924 1013 aa5.31□□□□□ -1.56
SHE10YGL228W ATG29Q12092 213 aa5.31□□□□□ -1.56
SHE10YGL228W RPS4AP0CX35 261 aaKnown RBP5.3□□□□□ -1.56
SHE10YGL228W RPS4BP0CX36 261 aaKnown RBP5.3□□□□□ -1.56
SHE10YGL228W KAR1P11927 433 aa5.3□□□□□ -1.56
SHE10YGL228W FTH1P38310 465 aa5.3□□□□□ -1.56
SHE10YGL228W JEM1P40358 645 aa5.3□□□□□ -1.56
SHE10YGL228W YIL108WP40483 696 aaKnown RBP5.3□□□□□ -1.56
SHE10YGL228W IAH1P41734 238 aa5.3□□□□□ -1.56
SHE10YGL228W MPS3P47069 682 aa5.3□□□□□ -1.56
SHE10YGL228W GIP3Q03016 1276 aa5.3□□□□□ -1.56
SHE10YGL228W ATG26Q06321 1198 aa5.3□□□□□ -1.56
SHE10YGL228W GPN2Q08726 347 aaPredicted RBP5.3□□□□□ -1.56
SHE10YGL228W SRO7Q12038 1033 aa5.3□□□□□ -1.56
SHE10YGL228W HAL9Q12180 1030 aa5.3□□□□□ -1.56
SHE10YGL228W AI3P03877 415 aa5.29□□□□□ -1.56
SHE10YGL228W TPK2P06245 380 aa5.29□□□□□ -1.56
SHE10YGL228W SCL1P21243 252 aaKnown RBP5.29□□□□□ -1.56
SHE10YGL228W TRX3P25372 127 aa5.29□□□□□ -1.56
SHE10YGL228W FUN30P31380 1131 aa5.29□□□□□ -1.56
SHE10YGL228W DPH5P32469 300 aaPredicted RBP5.29□□□□□ -1.56
SHE10YGL228W ATO2P32907 282 aa5.29□□□□□ -1.56
SHE10YGL228W MRPL17P36528 281 aa5.29□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 27.1 ms