RNA–Protein interactions for RNA: YFL040W

YFL040W, Transcript of Putative transporter, yeast

Gene YFL040W, Length 1,623 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YFL040W	YFL040W	LCB2	P40970	561 aa		4.07	□□□□□ -1.76
YFL040W	YFL040W	HOS2	P53096	452 aa	Predicted RBP	4.07	□□□□□ -1.76
YFL040W	YFL040W	ART5	P53244	586 aa	Known RBP	4.07	□□□□□ -1.76
YFL040W	YFL040W	EFM6	P53970	246 aa		4.07	□□□□□ -1.76
YFL040W	YFL040W	CIK1	Q01649	594 aa		4.07	□□□□□ -1.76
YFL040W	YFL040W	YMR178W	Q03219	274 aa	Known RBP	4.07	□□□□□ -1.76
YFL040W	YFL040W	MRPL1	Q04599	285 aa		4.07	□□□□□ -1.76
YFL040W	YFL040W	RQC1	Q05468	723 aa	Known RBP	4.07	□□□□□ -1.76
YFL040W	YFL040W	HER1	Q12276	1246 aa		4.07	□□□□□ -1.76
YFL040W	YFL040W	PAR32	Q12515	295 aa	Known RBP	4.07	□□□□□ -1.76
YFL040W	YFL040W	YPT1	P01123	206 aa	Known RBP	4.06	□□□□□ -1.76
YFL040W	YFL040W	SPE2	P21182	396 aa		4.06	□□□□□ -1.76
YFL040W	YFL040W	YCR051W	P25631	222 aa		4.06	□□□□□ -1.76
YFL040W	YFL040W	MGM1	P32266	881 aa		4.06	□□□□□ -1.76
YFL040W	YFL040W	SSE2	P32590	693 aa	Known RBP	4.06	□□□□□ -1.76
YFL040W	YFL040W	SEF1	P34228	1148 aa		4.06	□□□□□ -1.76
YFL040W	YFL040W	CMC1	P36064	111 aa		4.06	□□□□□ -1.76
YFL040W	YFL040W	RFC1	P38630	861 aa	Known RBP	4.06	□□□□□ -1.76
YFL040W	YFL040W	CAJ1	P39101	391 aa		4.06	□□□□□ -1.76
YFL040W	YFL040W	VMA13	P41807	478 aa	Known RBP	4.06	□□□□□ -1.76
YFL040W	YFL040W	ZIM17	P42844	174 aa		4.06	□□□□□ -1.76
YFL040W	YFL040W	TCB2	P48231	1178 aa		4.06	□□□□□ -1.76
YFL040W	YFL040W	IPI3	P53877	555 aa		4.06	□□□□□ -1.76
YFL040W	YFL040W	YDR286C	Q05530	114 aa		4.06	□□□□□ -1.76
YFL040W	YFL040W	FMP45	Q07651	309 aa		4.06	□□□□□ -1.76
YFL040W	YFL040W	AFT2	Q08957	416 aa		4.06	□□□□□ -1.76
YFL040W	YFL040W	APL4	Q12028	832 aa		4.06	□□□□□ -1.76
YFL040W	YFL040W	YLR112W	Q12130	139 aa		4.06	□□□□□ -1.76
YFL040W	YFL040W	SPT7	P35177	1332 aa		4.06	□□□□□ -1.76
YFL040W	YFL040W	PDA1	P16387	420 aa	Known RBP	4.06	□□□□□ -1.76
YFL040W	YFL040W	ADH7	P25377	361 aa		4.06	□□□□□ -1.76
YFL040W	YFL040W	PUP3	P25451	205 aa	Known RBP	4.06	□□□□□ -1.76
YFL040W	YFL040W	BUD14	P27637	709 aa		4.06	□□□□□ -1.76
YFL040W	YFL040W	ERV1	P27882	189 aa		4.06	□□□□□ -1.76
YFL040W	YFL040W	ELO1	P39540	310 aa		4.06	□□□□□ -1.76
YFL040W	YFL040W	PCI8	P40512	444 aa		4.06	□□□□□ -1.76
YFL040W	YFL040W	APT1	P49435	187 aa	Known RBP	4.06	□□□□□ -1.76
YFL040W	YFL040W	TWF1	P53250	332 aa		4.06	□□□□□ -1.76
YFL040W	YFL040W	BOP3	P53958	396 aa		4.06	□□□□□ -1.76
YFL040W	YFL040W	MEH1	Q02205	184 aa		4.06	□□□□□ -1.76
YFL040W	YFL040W	DPB4	Q04603	196 aa	Known RBP	4.06	□□□□□ -1.76
YFL040W	YFL040W	ROY1	Q04847	553 aa		4.06	□□□□□ -1.76
YFL040W	YFL040W	RBS1	Q05672	457 aa	Known RBP	4.06	□□□□□ -1.76
YFL040W	YFL040W	PDH1	Q12428	516 aa	Known RBP	4.06	□□□□□ -1.76
YFL040W	YFL040W	YCP4	P25349	247 aa	Known RBP	4.05	□□□□□ -1.76
YFL040W	YFL040W	SNT1	P25357	1226 aa		4.05	□□□□□ -1.76
YFL040W	YFL040W	PRD1	P25375	712 aa		4.05	□□□□□ -1.76
YFL040W	YFL040W	ANP1	P32629	500 aa		4.05	□□□□□ -1.76
YFL040W	YFL040W	MDL1	P33310	695 aa		4.05	□□□□□ -1.76
YFL040W	YFL040W	SEC66	P33754	206 aa		4.05	□□□□□ -1.76
YFL040W	YFL040W	MIA40	P36046	403 aa		4.05	□□□□□ -1.76
YFL040W	YFL040W	LEU5	P38702	357 aa		4.05	□□□□□ -1.76
YFL040W	YFL040W	SPC97	P38863	823 aa		4.05	□□□□□ -1.76
YFL040W	YFL040W	ALG5	P40350	334 aa		4.05	□□□□□ -1.76
YFL040W	YFL040W	HXT9	P40885	567 aa		4.05	□□□□□ -1.76
YFL040W	YFL040W	OAZ1	Q02803	292 aa		4.05	□□□□□ -1.76
YFL040W	YFL040W	GYL1	Q04322	720 aa		4.05	□□□□□ -1.76
YFL040W	YFL040W	ARP10	Q04549	284 aa		4.05	□□□□□ -1.76
YFL040W	YFL040W	GSH2	Q08220	491 aa		4.05	□□□□□ -1.76
YFL040W	YFL040W	GEP3	Q08622	556 aa		4.05	□□□□□ -1.76
YFL040W	YFL040W	AFI1	Q99222	893 aa		4.05	□□□□□ -1.76
YFL040W	YFL040W	ELO2	P25358	347 aa		4.04	□□□□□ -1.76
YFL040W	YFL040W	RRP7	P25368	297 aa	Predicted RBP	4.04	□□□□□ -1.76
YFL040W	YFL040W	YBR144C	P34215	104 aa		4.04	□□□□□ -1.76
YFL040W	YFL040W	ASK1	P35734	292 aa		4.04	□□□□□ -1.76
YFL040W	YFL040W	APE3	P37302	537 aa	Known RBP	4.04	□□□□□ -1.76
YFL040W	YFL040W	GND1	P38720	489 aa	Known RBP	4.04	□□□□□ -1.76
YFL040W	YFL040W	ANS1	P38832	159 aa		4.04	□□□□□ -1.76
YFL040W	YFL040W	VRG4	P40107	337 aa		4.04	□□□□□ -1.76
YFL040W	YFL040W	HXT14	P42833	540 aa		4.04	□□□□□ -1.76
YFL040W	YFL040W	LYS20	P48570	428 aa	Known RBP	4.04	□□□□□ -1.76
YFL040W	YFL040W	SCW4	P53334	386 aa	Known RBP	4.04	□□□□□ -1.76
YFL040W	YFL040W	LEU9	Q12166	604 aa	Known RBP	4.04	□□□□□ -1.76
YFL040W	YFL040W	CBP1	P07252	654 aa		4.03	□□□□□ -1.76
YFL040W	YFL040W	RPL3	P14126	387 aa	Known RBP	4.03	□□□□□ -1.76
YFL040W	YFL040W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.03	□□□□□ -1.76	not detected
YFL040W	YFL040W	IMG1	P25626	169 aa		4.03	□□□□□ -1.76
YFL040W	YFL040W	PAP1	P29468	568 aa	Known RBP	4.03	□□□□□ -1.76
YFL040W	YFL040W	HXT3	P32466	567 aa	Known RBP	4.03	□□□□□ -1.76
YFL040W	YFL040W	NUP133	P36161	1157 aa		4.03	□□□□□ -1.76
YFL040W	YFL040W	THI2	P38141	450 aa		4.03	□□□□□ -1.76
YFL040W	YFL040W	TSC10	P38342	320 aa		4.03	□□□□□ -1.76
YFL040W	YFL040W	ARP1	P38696	384 aa		4.03	□□□□□ -1.76
YFL040W	YFL040W	OTU2	P38747	307 aa	Known RBP	4.03	□□□□□ -1.76
YFL040W	YFL040W	YIR016W	P40572	265 aa		4.03	□□□□□ -1.76
YFL040W	YFL040W	GAT1	P43574	510 aa		4.03	□□□□□ -1.76
YFL040W	YFL040W	DLD2	P46681	530 aa	Known RBP	4.03	□□□□□ -1.76
YFL040W	YFL040W	MDV1	P47025	714 aa		4.03	□□□□□ -1.76
YFL040W	YFL040W	OGG1	P53397	376 aa	Predicted RBP	4.03	□□□□□ -1.76
YFL040W	YFL040W	VPS9	P54787	451 aa		4.03	□□□□□ -1.76
YFL040W	YFL040W	FIN1	Q03898	291 aa		4.03	□□□□□ -1.76
YFL040W	YFL040W	MCP2	Q06567	569 aa		4.03	□□□□□ -1.76
YFL040W	YFL040W	PGC1	Q08959	321 aa		4.03	□□□□□ -1.76
YFL040W	YFL040W	RGT2	Q12300	763 aa		4.03	□□□□□ -1.76
YFL040W	YFL040W	YML133C	Q03099	1374 aa		4.03	□□□□□ -1.76
YFL040W	YFL040W	YLL067C	Q07888	1374 aa		4.03	□□□□□ -1.76
YFL040W	YFL040W	YLL066C	Q99208	1374 aa		4.03	□□□□□ -1.76
YFL040W	YFL040W	RPL42A	P0CX27	106 aa	Known RBP	4.03	□□□□□ -1.77
YFL040W	YFL040W	RPL42B	P0CX28	106 aa	Known RBP	4.03	□□□□□ -1.77
YFL040W	YFL040W	YBL055C	P34220	418 aa	Predicted RBP	4.03	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms