RNA–Protein interactions for RNA: YDR240C

SNU56, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU56, Length 1,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU56YDR240C ALK1P43633 760 aaKnown RBP2.74□□□□□ -1.97
SNU56YDR240C BTN2P53286 410 aa2.74□□□□□ -1.97
SNU56YDR240C ADD37Q03233 198 aa2.74□□□□□ -1.97
SNU56YDR240C YML037CQ03703 340 aa2.74□□□□□ -1.97
SNU56YDR240C VIP1Q06685 1146 aaKnown RBP2.74□□□□□ -1.97
SNU56YDR240C RRP12Q12754 1228 aaKnown RBP2.74□□□□□ -1.97
SNU56YDR240C SUP35P05453 685 aaKnown RBP2.73□□□□□ -1.97
SNU56YDR240C YBL029WP38201 376 aa2.73□□□□□ -1.97
SNU56YDR240C DPH1P40487 425 aaKnown RBP2.73□□□□□ -1.97
SNU56YDR240C ELP2P42935 788 aa2.73□□□□□ -1.97
SNU56YDR240C DRN1P53255 507 aaKnown RBP2.73□□□□□ -1.97
SNU56YDR240C YDL057WQ07379 328 aa2.73□□□□□ -1.97
SNU56YDR240C SSP2Q08646 371 aa2.73□□□□□ -1.97
SNU56YDR240C NOP58Q12499 511 aaKnown RBP2.73□□□□□ -1.97
SNU56YDR240C CTF3Q12748 733 aa2.73□□□□□ -1.97
SNU56YDR240C RAD52P06778 471 aaKnown RBP2.72□□□□□ -1.97
SNU56YDR240C PEP4P07267 405 aaKnown RBP2.72□□□□□ -1.97
SNU56YDR240C SPT15P13393 240 aaKnown RBP2.72□□□□□ -1.97
SNU56YDR240C KAR3P17119 729 aa2.72□□□□□ -1.97
SNU56YDR240C SHP1P34223 423 aa2.72□□□□□ -1.97
SNU56YDR240C YKU80Q04437 629 aa2.72□□□□□ -1.97
SNU56YDR240C SPE4Q12455 300 aa2.72□□□□□ -1.97
SNU56YDR240C ART10P18634 518 aaKnown RBP2.71□□□□□ -1.97
SNU56YDR240C DPB3P27344 201 aa2.71□□□□□ -1.97
SNU56YDR240C CHS3P29465 1165 aa2.71□□□□□ -1.97
SNU56YDR240C FUI1P38196 639 aa2.71□□□□□ -1.97
SNU56YDR240C PRE5P40302 234 aaKnown RBP2.71□□□□□ -1.97
SNU56YDR240C GWT1P47026 490 aa2.71□□□□□ -1.97
SNU56YDR240C RBG2P53295 368 aaKnown RBP2.71□□□□□ -1.97
SNU56YDR240C GPI1P53306 609 aa2.71□□□□□ -1.97
SNU56YDR240C RRN11Q04712 507 aa2.71□□□□□ -1.97
SNU56YDR240C YER078W-AQ3E7A2 54 aa2.71□□□□□ -1.97
SNU56YDR240C HSH49Q99181 213 aaPredicted RBP2.71□□□□□ -1.97
SNU56YDR240C FUN19P28003 413 aaPredicted RBP2.71□□□□□ -1.98
SNU56YDR240C DUG2P38149 878 aa2.71□□□□□ -1.98
SNU56YDR240C RRT2P38332 387 aa2.71□□□□□ -1.98
SNU56YDR240C AFG3P39925 761 aa2.71□□□□□ -1.98
SNU56YDR240C WSC2P53832 503 aa2.71□□□□□ -1.98
SNU56YDR240C TOF2Q02208 771 aa2.71□□□□□ -1.98
SNU56YDR240C YMR018WQ04364 514 aa2.71□□□□□ -1.98
SNU56YDR240C PHO92Q06390 306 aa2.71□□□□□ -1.98
SNU56YDR240C BRR1Q99177 341 aaPredicted RBP2.71□□□□□ -1.98
SNU56YDR240C YCK1P23291 538 aa2.7□□□□□ -1.98
SNU56YDR240C PAP1P29468 568 aaKnown RBP2.7□□□□□ -1.98
SNU56YDR240C YEL045CP32616 141 aa2.7□□□□□ -1.98
SNU56YDR240C PAD1P33751 242 aaKnown RBP RIP-Chip data2.7□□□□□ -1.98not detected
SNU56YDR240C UBP11P36026 717 aa2.7□□□□□ -1.98
SNU56YDR240C BNA4P38169 460 aa2.7□□□□□ -1.98
SNU56YDR240C CCT6P39079 546 aa2.7□□□□□ -1.98
SNU56YDR240C TIF4631P39935 952 aaKnown RBP2.7□□□□□ -1.98
SNU56YDR240C VID30P53076 958 aa2.7□□□□□ -1.98
SNU56YDR240C PAL1Q05518 499 aaKnown RBP2.7□□□□□ -1.98
SNU56YDR240C RBS1Q05672 457 aaKnown RBP2.7□□□□□ -1.98
SNU56YDR240C THP1Q08231 455 aa2.7□□□□□ -1.98
SNU56YDR240C BSC6Q08280 497 aa2.7□□□□□ -1.98
SNU56YDR240C YBR126W-AQ8TGU7 68 aa2.7□□□□□ -1.98
SNU56YDR240C SGS1P35187 1447 aa2.69□□□□□ -1.98
SNU56YDR240C CPR1P14832 162 aaKnown RBP2.69□□□□□ -1.98
SNU56YDR240C HSC82P15108 705 aaKnown RBP2.69□□□□□ -1.98
SNU56YDR240C POL4P25615 582 aa2.69□□□□□ -1.98
SNU56YDR240C DEG1P31115 442 aaKnown RBP2.69□□□□□ -1.98
SNU56YDR240C YME1P32795 747 aa2.69□□□□□ -1.98
SNU56YDR240C MFT1P33441 392 aaKnown RBP2.69□□□□□ -1.98
SNU56YDR240C SEF1P34228 1148 aa2.69□□□□□ -1.98
SNU56YDR240C TCM62P38228 572 aaKnown RBP2.69□□□□□ -1.98
SNU56YDR240C FLC2P39719 783 aa2.69□□□□□ -1.98
SNU56YDR240C ALG5P40350 334 aa2.69□□□□□ -1.98
SNU56YDR240C YGR210CP42942 411 aa2.69□□□□□ -1.98
SNU56YDR240C SDT1P53078 280 aa2.69□□□□□ -1.98
SNU56YDR240C CAF40P53829 373 aa2.69□□□□□ -1.98
SNU56YDR240C CFT2Q12102 859 aaPredicted RBP2.69□□□□□ -1.98
SNU56YDR240C ERV2Q12284 196 aa2.69□□□□□ -1.98
SNU56YDR240C HHF1P02309 103 aaKnown RBP2.68□□□□□ -1.98
SNU56YDR240C HIP1P06775 603 aa2.68□□□□□ -1.98
SNU56YDR240C CDC16P09798 840 aa2.68□□□□□ -1.98
SNU56YDR240C MRP13P12686 339 aa2.68□□□□□ -1.98
SNU56YDR240C HEM15P16622 393 aa2.68□□□□□ -1.98
SNU56YDR240C GLK1P17709 500 aaKnown RBP2.68□□□□□ -1.98
SNU56YDR240C ARO2P28777 376 aaKnown RBP2.68□□□□□ -1.98
SNU56YDR240C CRM1P30822 1084 aaKnown RBP2.68□□□□□ -1.98
SNU56YDR240C MSN2P33748 704 aa2.68□□□□□ -1.98
SNU56YDR240C YBL059WP34224 193 aa2.68□□□□□ -1.98
SNU56YDR240C YGL039WP53183 348 aaKnown RBP2.68□□□□□ -1.98
SNU56YDR240C HEF3P53978 1044 aaKnown RBP2.68□□□□□ -1.98
SNU56YDR240C FIN1Q03898 291 aa2.68□□□□□ -1.98
SNU56YDR240C YEH1Q07804 573 aa2.68□□□□□ -1.98
SNU56YDR240C YOR387CQ08910 206 aa2.68□□□□□ -1.98
SNU56YDR240C KEL3Q08979 651 aaPredicted RBP2.68□□□□□ -1.98
SNU56YDR240C NMD4Q12129 218 aa2.68□□□□□ -1.98
SNU56YDR240C HUA2Q12134 243 aa2.68□□□□□ -1.98
SNU56YDR240C MRP4P32902 394 aa2.67□□□□□ -1.98
SNU56YDR240C AIM22P47051 409 aa2.67□□□□□ -1.98
SNU56YDR240C DUO1P53168 247 aaKnown RBP2.67□□□□□ -1.98
SNU56YDR240C MEP3P53390 489 aa2.67□□□□□ -1.98
SNU56YDR240C COQ9Q05779 260 aa2.67□□□□□ -1.98
SNU56YDR240C YPT6Q99260 215 aa2.67□□□□□ -1.98
SNU56YDR240C PRP2P20095 876 aaPredicted RBP2.66□□□□□ -1.98
SNU56YDR240C NAM9P27929 486 aa2.66□□□□□ -1.98
SNU56YDR240C YIM1P28625 365 aa2.66□□□□□ -1.98
SNU56YDR240C SSH4P32343 579 aa2.66□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 35 ms