RNA–Protein interactions for RNA: YDR118W

APC4, Transcript of Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C), yeast

Gene APC4, Length 1,959 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APC4	YDR118W	ATP11	P32453	318 aa		4.54	□□□□□ -1.68
APC4	YDR118W	SDH3	P33421	198 aa		4.54	□□□□□ -1.68
APC4	YDR118W	RPF2	P36160	344 aa	Known RBP	4.54	□□□□□ -1.68
APC4	YDR118W	YER034W	P40022	185 aa	Known RBP	4.54	□□□□□ -1.68
APC4	YDR118W	EMP65	P40085	556 aa		4.54	□□□□□ -1.68
APC4	YDR118W	GCD10	P41814	478 aa		4.54	□□□□□ -1.68
APC4	YDR118W	ILM1	P47155	203 aa		4.54	□□□□□ -1.68
APC4	YDR118W	YPT32	P51996	222 aa	Known RBP	4.54	□□□□□ -1.68
APC4	YDR118W	ARC35	P53731	342 aa	Known RBP	4.54	□□□□□ -1.68
APC4	YDR118W	CLU1	Q03690	1277 aa	Known RBP	4.54	□□□□□ -1.68
APC4	YDR118W	ACL4	Q03771	387 aa		4.54	□□□□□ -1.68
APC4	YDR118W	ISR1	Q06098	443 aa	Known RBP	4.54	□□□□□ -1.68
APC4	YDR118W	CDA1	Q06702	301 aa		4.54	□□□□□ -1.68
APC4	YDR118W	SGT1	Q08446	395 aa		4.54	□□□□□ -1.68
APC4	YDR118W	SLF1	Q12034	447 aa	Known RBP	4.54	□□□□□ -1.68
APC4	YDR118W	YMR084W	A2P2R3	262 aa		4.53	□□□□□ -1.68
APC4	YDR118W	YKR104W	P0CE69	306 aa		4.53	□□□□□ -1.68
APC4	YDR118W	MET8	P15807	274 aa		4.53	□□□□□ -1.68
APC4	YDR118W	NPR1	P22211	790 aa		4.53	□□□□□ -1.68
APC4	YDR118W	SAN1	P22470	610 aa		4.53	□□□□□ -1.68
APC4	YDR118W	YCK2	P23292	546 aa	Known RBP	4.53	□□□□□ -1.68
APC4	YDR118W	MEF1	P25039	761 aa		4.53	□□□□□ -1.68
APC4	YDR118W	PHO84	P25297	587 aa	Known RBP	4.53	□□□□□ -1.68
APC4	YDR118W	CRM1	P30822	1084 aa	Known RBP	4.53	□□□□□ -1.68
APC4	YDR118W	CCR4	P31384	837 aa	Known RBP	4.53	□□□□□ -1.68
APC4	YDR118W	CSE1	P33307	960 aa		4.53	□□□□□ -1.68
APC4	YDR118W	SPT23	P35210	1082 aa		4.53	□□□□□ -1.68
APC4	YDR118W	PIK1	P39104	1066 aa		4.53	□□□□□ -1.68
APC4	YDR118W	JEM1	P40358	645 aa		4.53	□□□□□ -1.68
APC4	YDR118W	HPM1	P40481	377 aa		4.53	□□□□□ -1.68
APC4	YDR118W	SEC27	P41811	889 aa	Known RBP	4.53	□□□□□ -1.68
APC4	YDR118W	SUT1	P53032	299 aa	Known RBP	4.53	□□□□□ -1.68
APC4	YDR118W	MAL11	P53048	616 aa		4.53	□□□□□ -1.68
APC4	YDR118W	IMA1	P53051	589 aa		4.53	□□□□□ -1.68
APC4	YDR118W	ZRG17	P53735	605 aa		4.53	□□□□□ -1.68
APC4	YDR118W	YMR111C	Q04461	462 aa	Predicted RBP	4.53	□□□□□ -1.68
APC4	YDR118W	DAL4	Q04895	635 aa		4.53	□□□□□ -1.68
APC4	YDR118W	GPN2	Q08726	347 aa	Predicted RBP	4.53	□□□□□ -1.68
APC4	YDR118W	YIG1	Q08956	461 aa		4.53	□□□□□ -1.68
APC4	YDR118W	TRM8	Q12009	286 aa		4.53	□□□□□ -1.68
APC4	YDR118W	Q0182	Q9ZZW1	134 aa		4.53	□□□□□ -1.68
APC4	YDR118W	SWI5	P08153	709 aa		4.53	□□□□□ -1.68
APC4	YDR118W	FUM1	P08417	488 aa	Known RBP	4.53	□□□□□ -1.68
APC4	YDR118W	POL30	P15873	258 aa	Known RBP	4.53	□□□□□ -1.68
APC4	YDR118W	CHL1	P22516	861 aa	Predicted RBP	4.53	□□□□□ -1.68
APC4	YDR118W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.53	□□□□□ -1.68	not detected
APC4	YDR118W	CAF4	P36130	643 aa		4.53	□□□□□ -1.68
APC4	YDR118W	SOL2	P37262	315 aa		4.53	□□□□□ -1.68
APC4	YDR118W	UBA4	P38820	440 aa		4.53	□□□□□ -1.68
APC4	YDR118W	MAM33	P40513	266 aa		4.53	□□□□□ -1.68
APC4	YDR118W	IAH1	P41734	238 aa		4.53	□□□□□ -1.68
APC4	YDR118W	RPA14	P50106	137 aa		4.53	□□□□□ -1.68
APC4	YDR118W	PRO2	P54885	456 aa	Known RBP	4.53	□□□□□ -1.68
APC4	YDR118W	PRP38	Q00723	242 aa	Predicted RBP	4.53	□□□□□ -1.68
APC4	YDR118W	SMA1	Q02651	245 aa		4.53	□□□□□ -1.68
APC4	YDR118W	ARG7	Q04728	441 aa		4.53	□□□□□ -1.68
APC4	YDR118W	RAD34	Q06665	692 aa		4.53	□□□□□ -1.68
APC4	YDR118W	MCH5	Q08777	521 aa		4.53	□□□□□ -1.68
APC4	YDR118W	YDR056C	Q12025	205 aa		4.53	□□□□□ -1.68
APC4	YDR118W	SRN2	Q99176	213 aa		4.53	□□□□□ -1.68
APC4	YDR118W	RPL24A	P04449	155 aa	Known RBP	4.52	□□□□□ -1.69
APC4	YDR118W	HXK2	P04807	486 aa	Known RBP	4.52	□□□□□ -1.69
APC4	YDR118W	STE3	P06783	470 aa		4.52	□□□□□ -1.69
APC4	YDR118W	YSR3	P23501	404 aa		4.52	□□□□□ -1.69
APC4	YDR118W	OCA4	P25366	362 aa		4.52	□□□□□ -1.69
APC4	YDR118W	PHO91	P27514	894 aa		4.52	□□□□□ -1.69
APC4	YDR118W	HES1	P35843	434 aa		4.52	□□□□□ -1.69
APC4	YDR118W	RMA1	P36001	430 aa	Known RBP	4.52	□□□□□ -1.69
APC4	YDR118W	YKL151C	P36059	337 aa		4.52	□□□□□ -1.69
APC4	YDR118W	GIP1	P38229	639 aa		4.52	□□□□□ -1.69
APC4	YDR118W	EXO84	P38261	753 aa		4.52	□□□□□ -1.69
APC4	YDR118W	CCT6	P39079	546 aa		4.52	□□□□□ -1.69
APC4	YDR118W	YGL176C	P46945	554 aa		4.52	□□□□□ -1.69
APC4	YDR118W	MPS3	P47069	682 aa		4.52	□□□□□ -1.69
APC4	YDR118W	BIR1	P47134	954 aa		4.52	□□□□□ -1.69
APC4	YDR118W	MTR3	P48240	250 aa	Predicted RBP	4.52	□□□□□ -1.69
APC4	YDR118W	NAS6	P50086	228 aa		4.52	□□□□□ -1.69
APC4	YDR118W	ERP6	P53198	216 aa		4.52	□□□□□ -1.69
APC4	YDR118W	YGR015C	P53208	328 aa		4.52	□□□□□ -1.69
APC4	YDR118W	BIO5	P53744	561 aa	Known RBP	4.52	□□□□□ -1.69
APC4	YDR118W	YNL260C	P53846	198 aa		4.52	□□□□□ -1.69
APC4	YDR118W	AAT1	Q01802	451 aa		4.52	□□□□□ -1.69
APC4	YDR118W	ATP25	Q03153	612 aa		4.52	□□□□□ -1.69
APC4	YDR118W	DYN3	Q04949	312 aa		4.52	□□□□□ -1.69
APC4	YDR118W	YLR413W	Q06689	675 aa		4.52	□□□□□ -1.69
APC4	YDR118W	GRS2	Q06817	618 aa		4.52	□□□□□ -1.69
APC4	YDR118W	UAF30	Q08747	228 aa		4.52	□□□□□ -1.69
APC4	YDR118W	IOC2	Q12072	812 aa		4.52	□□□□□ -1.69
APC4	YDR118W	NSL1	Q12143	216 aa		4.52	□□□□□ -1.69
APC4	YDR118W	RRP42	Q12277	265 aa	Predicted RBP	4.52	□□□□□ -1.69
APC4	YDR118W	HTA1	P04911	132 aa	Known RBP	4.51	□□□□□ -1.69
APC4	YDR118W	HTA2	P04912	132 aa		4.51	□□□□□ -1.69
APC4	YDR118W	TPK2	P06245	380 aa		4.51	□□□□□ -1.69
APC4	YDR118W	DST1	P07273	309 aa		4.51	□□□□□ -1.69
APC4	YDR118W	SPT15	P13393	240 aa	Known RBP	4.51	□□□□□ -1.69
APC4	YDR118W	CCA1	P21269	546 aa		4.51	□□□□□ -1.69
APC4	YDR118W	CSM1	P25651	190 aa		4.51	□□□□□ -1.69
APC4	YDR118W	CIN8	P27895	1000 aa		4.51	□□□□□ -1.69
APC4	YDR118W	SIN4	P32259	974 aa		4.51	□□□□□ -1.69
APC4	YDR118W	STE14	P32584	239 aa		4.51	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 13 ms