RNA–Protein interactions for RNA: YDL220C

CDC13, Transcript of Single stranded DNA-binding protein found at TG1-3 telomere G-tails, yeastyeast

Gene CDC13, Length 2,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC13YDL220C YGR021WP53212 290 aa6.97□□□□□ -1.29
CDC13YDL220C RNH70P53331 553 aa6.97□□□□□ -1.29
CDC13YDL220C NOG2P53742 486 aaKnown RBP6.97□□□□□ -1.29
CDC13YDL220C CWC24P53769 259 aa6.97□□□□□ -1.29
CDC13YDL220C STP1Q00947 519 aa6.97□□□□□ -1.29
CDC13YDL220C YOR114WQ12219 294 aa6.97□□□□□ -1.29
CDC13YDL220C YPR1Q12458 312 aa6.97□□□□□ -1.29
CDC13YDL220C RRD2Q12461 358 aa6.97□□□□□ -1.29
CDC13YDL220C PET9P18239 318 aaKnown RBP6.97□□□□□ -1.29
CDC13YDL220C RSA4P25382 515 aaKnown RBP6.97□□□□□ -1.29
CDC13YDL220C NTG1P31378 399 aa6.97□□□□□ -1.29
CDC13YDL220C PRP21P32524 280 aaPredicted RBP6.97□□□□□ -1.29
CDC13YDL220C MTC2P34246 357 aa6.97□□□□□ -1.29
CDC13YDL220C UBP9P39967 754 aa6.97□□□□□ -1.29
CDC13YDL220C REF2P42073 533 aaPredicted RBP6.97□□□□□ -1.29
CDC13YDL220C SPO74P45819 413 aa6.97□□□□□ -1.29
CDC13YDL220C CPR7P47103 393 aa6.97□□□□□ -1.29
CDC13YDL220C ERV25P54837 211 aaKnown RBP6.97□□□□□ -1.29
CDC13YDL220C EST2Q06163 884 aa6.97□□□□□ -1.29
CDC13YDL220C TYW1Q08960 810 aaKnown RBP6.97□□□□□ -1.29
CDC13YDL220C NBL1Q3E7Y6 73 aa6.97□□□□□ -1.29
CDC13YDL220C ISN1Q99312 450 aa6.97□□□□□ -1.29
CDC13YDL220C GCR1P07261 785 aa6.97□□□□□ -1.29
CDC13YDL220C TY1A-LR4P0C2I8 440 aaKnown RBP6.97□□□□□ -1.29
CDC13YDL220C TY1A-DR6P0CX70 440 aa6.97□□□□□ -1.29
CDC13YDL220C TY1A-ER1P0CX71 440 aa6.97□□□□□ -1.29
CDC13YDL220C TY1A-LR2P0CX72 440 aa6.97□□□□□ -1.29
CDC13YDL220C TY1A-PLP0CX73 440 aa6.97□□□□□ -1.29
CDC13YDL220C TY1A-JR1P0CX74 440 aa6.97□□□□□ -1.29
CDC13YDL220C TY1A-LR3P0CX75 440 aa6.97□□□□□ -1.29
CDC13YDL220C TY1A-ML2P0CX76 440 aa6.97□□□□□ -1.29
CDC13YDL220C MATALPHA1P0CY06 175 aa6.97□□□□□ -1.29
CDC13YDL220C HMLALPHA1P0CY07 175 aa6.97□□□□□ -1.29
CDC13YDL220C RPL24BP24000 155 aaKnown RBP6.97□□□□□ -1.29
CDC13YDL220C YIM1P28625 365 aa6.97□□□□□ -1.29
CDC13YDL220C WHI3P34761 661 aaKnown RBP6.97□□□□□ -1.29
CDC13YDL220C DUG2P38149 878 aa6.97□□□□□ -1.29
CDC13YDL220C HSE1P38753 452 aa6.97□□□□□ -1.29
CDC13YDL220C LYS20P48570 428 aaKnown RBP6.97□□□□□ -1.29
CDC13YDL220C RCL1Q08096 367 aaPredicted RBP6.97□□□□□ -1.29
CDC13YDL220C MRN1Q08925 612 aaKnown RBP RIP-Chip data6.97□□□□□ -1.29not detected
CDC13YDL220C TY1A-GR1Q12085 440 aa6.97□□□□□ -1.29
CDC13YDL220C YOL107WQ12239 342 aa6.97□□□□□ -1.29
CDC13YDL220C RRI2Q12348 645 aa6.97□□□□□ -1.29
CDC13YDL220C TY1A-PR3Q6Q5H1 440 aaKnown RBP6.97□□□□□ -1.29
CDC13YDL220C TY1A-OLQ92392 440 aaKnown RBP6.97□□□□□ -1.29
CDC13YDL220C IFM1P25038 676 aa6.96□□□□□ -1.3
CDC13YDL220C VPH1P32563 840 aaKnown RBP6.96□□□□□ -1.3
CDC13YDL220C SPO23P33757 523 aa6.96□□□□□ -1.3
CDC13YDL220C SLM1P40485 686 aa6.96□□□□□ -1.3
CDC13YDL220C UFE1P41834 346 aa6.96□□□□□ -1.3
CDC13YDL220C LSB6P42951 607 aa6.96□□□□□ -1.3
CDC13YDL220C SLD3P53135 668 aa6.96□□□□□ -1.3
CDC13YDL220C LSB1P53281 241 aa6.96□□□□□ -1.3
CDC13YDL220C YDR090CQ03193 310 aa6.96□□□□□ -1.3
CDC13YDL220C YLR173WQ06247 608 aa6.96□□□□□ -1.3
CDC13YDL220C YGL194C-AQ2V2P6 80 aa6.96□□□□□ -1.3
CDC13YDL220C PMA1P05030 918 aaKnown RBP6.96□□□□□ -1.3
CDC13YDL220C CHA1P25379 360 aaKnown RBP6.96□□□□□ -1.3
CDC13YDL220C FUN30P31380 1131 aa6.96□□□□□ -1.3
CDC13YDL220C FRE1P32791 686 aa6.96□□□□□ -1.3
CDC13YDL220C RRT2P38332 387 aa6.96□□□□□ -1.3
CDC13YDL220C OSH7P38755 437 aa6.96□□□□□ -1.3
CDC13YDL220C END3P39013 349 aa6.96□□□□□ -1.3
CDC13YDL220C SAD1P43589 448 aa6.96□□□□□ -1.3
CDC13YDL220C AIM23P47015 356 aa6.96□□□□□ -1.3
CDC13YDL220C TRM82Q03774 444 aa6.96□□□□□ -1.3
CDC13YDL220C MRP1P10662 321 aaKnown RBP6.95□□□□□ -1.3
CDC13YDL220C MGR1P25573 417 aa6.95□□□□□ -1.3
CDC13YDL220C NDI1P32340 513 aa6.95□□□□□ -1.3
CDC13YDL220C SPR1P32603 445 aa6.95□□□□□ -1.3
CDC13YDL220C SRP102P36057 244 aaPredicted RBP6.95□□□□□ -1.3
CDC13YDL220C YKL069WP36088 180 aa6.95□□□□□ -1.3
CDC13YDL220C MLH1P38920 769 aa6.95□□□□□ -1.3
CDC13YDL220C FAA2P39518 744 aa6.95□□□□□ -1.3
CDC13YDL220C YJR056CP47115 236 aa6.95□□□□□ -1.3
CDC13YDL220C NBP1P52919 319 aaPredicted RBP6.95□□□□□ -1.3
CDC13YDL220C TIM13P53299 105 aa6.95□□□□□ -1.3
CDC13YDL220C MTG1Q03151 367 aaPredicted RBP6.95□□□□□ -1.3
CDC13YDL220C JIP4Q03361 876 aa6.95□□□□□ -1.3
CDC13YDL220C SMF3Q12078 473 aaPredicted RBP6.95□□□□□ -1.3
CDC13YDL220C FUR4P05316 633 aaKnown RBP6.95□□□□□ -1.3
CDC13YDL220C MAS2P11914 482 aa6.95□□□□□ -1.3
CDC13YDL220C CAP2P13517 287 aa6.95□□□□□ -1.3
CDC13YDL220C COX11P19516 300 aaKnown RBP6.95□□□□□ -1.3
CDC13YDL220C GUT2P32191 649 aa6.95□□□□□ -1.3
CDC13YDL220C DAL3P32459 195 aa6.95□□□□□ -1.3
CDC13YDL220C MUD1P32605 298 aaKnown RBP6.95□□□□□ -1.3
CDC13YDL220C ALG8P40351 577 aa6.95□□□□□ -1.3
CDC13YDL220C VHR1P40522 640 aa6.95□□□□□ -1.3
CDC13YDL220C JAC1P53193 184 aa6.95□□□□□ -1.3
CDC13YDL220C SAM50P53969 484 aa6.95□□□□□ -1.3
CDC13YDL220C CSN9Q03981 162 aa6.95□□□□□ -1.3
CDC13YDL220C SIZ1Q04195 904 aa6.95□□□□□ -1.3
CDC13YDL220C ECM38Q05902 660 aaPredicted RBP6.95□□□□□ -1.3
CDC13YDL220C YPS7Q06325 596 aa6.95□□□□□ -1.3
CDC13YDL220C AKR2Q12013 749 aa6.95□□□□□ -1.3
CDC13YDL220C UBR1P19812 1950 aa6.94□□□□□ -1.3
CDC13YDL220C COBP00163 385 aa6.94□□□□□ -1.3
CDC13YDL220C DAL81P21657 970 aa6.94□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms