RNA–Protein interactions for RNA: YDL006W

PTC1, Transcript of Type 2C protein phosphatase (PP2C), yeast

Gene PTC1, Length 846 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PTC1	YDL006W	TSR2	Q06672	205 aa	Known RBP	4.67	□□□□□ -1.66
PTC1	YDL006W	TIP41	Q12199	356 aa		4.67	□□□□□ -1.66
PTC1	YDL006W	YER145C-A	A0A023PYF4	145 aa		4.66	□□□□□ -1.66
PTC1	YDL006W	THR4	P16120	514 aa	Known RBP	4.66	□□□□□ -1.66
PTC1	YDL006W	VPS1	P21576	704 aa	Known RBP	4.66	□□□□□ -1.66
PTC1	YDL006W	GAC1	P28006	793 aa		4.66	□□□□□ -1.66
PTC1	YDL006W	ECM32	P32644	1121 aa	Known RBP	4.66	□□□□□ -1.66
PTC1	YDL006W	SPC97	P38863	823 aa		4.66	□□□□□ -1.66
PTC1	YDL006W	FAR3	P46671	204 aa		4.66	□□□□□ -1.66
PTC1	YDL006W	YGL138C	P53122	345 aa		4.66	□□□□□ -1.66
PTC1	YDL006W	STP1	Q00947	519 aa		4.66	□□□□□ -1.66
PTC1	YDL006W	BUD22	Q04347	519 aa	Known RBP	4.66	□□□□□ -1.66
PTC1	YDL006W	SUE1	Q06524	206 aa		4.66	□□□□□ -1.66
PTC1	YDL006W	FRE3	Q08905	711 aa		4.66	□□□□□ -1.66
PTC1	YDL006W	LEU9	Q12166	604 aa	Known RBP	4.66	□□□□□ -1.66
PTC1	YDL006W	GSC2	P40989	1895 aa		4.66	□□□□□ -1.66
PTC1	YDL006W	GCN4	P03069	281 aa		4.65	□□□□□ -1.67
PTC1	YDL006W	YER190C-B	P0CX94	160 aa		4.65	□□□□□ -1.67
PTC1	YDL006W	YEL077W-A	P0CX95	160 aa		4.65	□□□□□ -1.67
PTC1	YDL006W	YGR296C-B	P0CX96	160 aa		4.65	□□□□□ -1.67
PTC1	YDL006W	YPL283W-B	P0CX97	160 aa		4.65	□□□□□ -1.67
PTC1	YDL006W	YPR204C-A	P0CX98	160 aa		4.65	□□□□□ -1.67
PTC1	YDL006W	MET8	P15807	274 aa		4.65	□□□□□ -1.67
PTC1	YDL006W	CMK1	P27466	446 aa	Known RBP	4.65	□□□□□ -1.67
PTC1	YDL006W	YMR124W	P39523	943 aa	Known RBP	4.65	□□□□□ -1.67
PTC1	YDL006W	ELO1	P39540	310 aa		4.65	□□□□□ -1.67
PTC1	YDL006W	ESL1	P40456	1118 aa		4.65	□□□□□ -1.67
PTC1	YDL006W	VPS25	P47142	202 aa		4.65	□□□□□ -1.67
PTC1	YDL006W	FMS1	P50264	508 aa		4.65	□□□□□ -1.67
PTC1	YDL006W	YGR127W	P53275	312 aa		4.65	□□□□□ -1.67
PTC1	YDL006W	RET3	P53600	189 aa		4.65	□□□□□ -1.67
PTC1	YDL006W	NGL3	Q03210	505 aa		4.65	□□□□□ -1.67
PTC1	YDL006W	ECM22	Q05958	814 aa	Predicted RBP	4.65	□□□□□ -1.67
PTC1	YDL006W	SPE4	Q12455	300 aa		4.65	□□□□□ -1.67
PTC1	YDL006W	ARD1	P07347	238 aa	Predicted RBP	4.64	□□□□□ -1.67
PTC1	YDL006W	FRS2	P15625	503 aa	Known RBP	4.64	□□□□□ -1.67
PTC1	YDL006W	ALG1	P16661	449 aa		4.64	□□□□□ -1.67
PTC1	YDL006W	CLC1	P17891	233 aa		4.64	□□□□□ -1.67
PTC1	YDL006W	YKT6	P36015	200 aa	Known RBP	4.64	□□□□□ -1.67
PTC1	YDL006W	RFT1	P38206	574 aa	Predicted RBP	4.64	□□□□□ -1.67
PTC1	YDL006W	PHO88	P38264	188 aa	Predicted RBP	4.64	□□□□□ -1.67
PTC1	YDL006W	TSC10	P38342	320 aa		4.64	□□□□□ -1.67
PTC1	YDL006W	YPT11	P48559	417 aa		4.64	□□□□□ -1.67
PTC1	YDL006W	LYS20	P48570	428 aa	Known RBP	4.64	□□□□□ -1.67
PTC1	YDL006W	GLO1	P50107	326 aa		4.64	□□□□□ -1.67
PTC1	YDL006W	YTP1	P53584	459 aa		4.64	□□□□□ -1.67
PTC1	YDL006W	VPS75	P53853	264 aa		4.64	□□□□□ -1.67
PTC1	YDL006W	EFM6	P53970	246 aa		4.64	□□□□□ -1.67
PTC1	YDL006W	RBA50	Q04418	439 aa		4.64	□□□□□ -1.67
PTC1	YDL006W	ARP10	Q04549	284 aa		4.64	□□□□□ -1.67
PTC1	YDL006W	MRPL1	Q04599	285 aa		4.64	□□□□□ -1.67
PTC1	YDL006W	YEH1	Q07804	573 aa		4.64	□□□□□ -1.67
PTC1	YDL006W	CIR2	Q08822	631 aa		4.64	□□□□□ -1.67
PTC1	YDL006W	ATX2	Q12067	313 aa		4.64	□□□□□ -1.67
PTC1	YDL006W	CFT2	Q12102	859 aa	Predicted RBP	4.64	□□□□□ -1.67
PTC1	YDL006W	DDP1	Q99321	188 aa	Known RBP	4.64	□□□□□ -1.67
PTC1	YDL006W	YPR089W	O13585	888 aa		4.63	□□□□□ -1.67
PTC1	YDL006W	MF(ALPHA)1	P01149	165 aa		4.63	□□□□□ -1.67
PTC1	YDL006W	SAM1	P10659	382 aa	Known RBP	4.63	□□□□□ -1.67
PTC1	YDL006W	VMA2	P16140	517 aa	Known RBP	4.63	□□□□□ -1.67
PTC1	YDL006W	AIM17	P23180	465 aa	Known RBP	4.63	□□□□□ -1.67
PTC1	YDL006W	POL4	P25615	582 aa		4.63	□□□□□ -1.67
PTC1	YDL006W	YBR225W	P38321	900 aa		4.63	□□□□□ -1.67
PTC1	YDL006W	UTP9	P38882	575 aa	Known RBP	4.63	□□□□□ -1.67
PTC1	YDL006W	CCT6	P39079	546 aa		4.63	□□□□□ -1.67
PTC1	YDL006W	SRB7	P47822	140 aa		4.63	□□□□□ -1.67
PTC1	YDL006W	MRX6	P48564	524 aa		4.63	□□□□□ -1.67
PTC1	YDL006W	LIF1	P53150	421 aa		4.63	□□□□□ -1.67
PTC1	YDL006W	RPL15B	P54780	204 aa	Predicted RBP	4.63	□□□□□ -1.67
PTC1	YDL006W	YML122C	Q03207	126 aa		4.63	□□□□□ -1.67
PTC1	YDL006W	ECI1	Q05871	280 aa		4.63	□□□□□ -1.67
PTC1	YDL006W	MMR1	Q06324	491 aa		4.63	□□□□□ -1.67
PTC1	YDL006W	YLH47	Q06493	454 aa		4.63	□□□□□ -1.67
PTC1	YDL006W	MCP2	Q06567	569 aa		4.63	□□□□□ -1.67
PTC1	YDL006W	POS5	Q06892	414 aa		4.63	□□□□□ -1.67
PTC1	YDL006W	FMP40	Q08968	688 aa	Predicted RBP	4.63	□□□□□ -1.67
PTC1	YDL006W	TY1B-A	O13527	1196 aa	Known RBP	4.62	□□□□□ -1.67
PTC1	YDL006W	HIS4	P00815	799 aa	Known RBP	4.62	□□□□□ -1.67
PTC1	YDL006W	CDC31	P06704	161 aa	Known RBP	4.62	□□□□□ -1.67
PTC1	YDL006W	MDM10	P18409	493 aa		4.62	□□□□□ -1.67
PTC1	YDL006W	OCA4	P25366	362 aa		4.62	□□□□□ -1.67
PTC1	YDL006W	PUP3	P25451	205 aa	Known RBP	4.62	□□□□□ -1.67
PTC1	YDL006W	CDC60	P26637	1090 aa	Known RBP	4.62	□□□□□ -1.67
PTC1	YDL006W	BMH1	P29311	267 aa	Known RBP	4.62	□□□□□ -1.67
PTC1	YDL006W	SSE2	P32590	693 aa	Known RBP	4.62	□□□□□ -1.67
PTC1	YDL006W	UTR4	P32626	227 aa		4.62	□□□□□ -1.67
PTC1	YDL006W	APE3	P37302	537 aa	Known RBP	4.62	□□□□□ -1.67
PTC1	YDL006W	MNN2	P38069	597 aa		4.62	□□□□□ -1.67
PTC1	YDL006W	ERG7	P38604	731 aa		4.62	□□□□□ -1.67
PTC1	YDL006W	NDT80	P38830	627 aa		4.62	□□□□□ -1.67
PTC1	YDL006W	YER130C	P39959	443 aa		4.62	□□□□□ -1.67
PTC1	YDL006W	RGI2	P40188	164 aa		4.62	□□□□□ -1.67
PTC1	YDL006W	APT1	P49435	187 aa	Known RBP	4.62	□□□□□ -1.67
PTC1	YDL006W	VID30	P53076	958 aa		4.62	□□□□□ -1.67
PTC1	YDL006W	CUE3	P53137	624 aa	Known RBP	4.62	□□□□□ -1.67
PTC1	YDL006W	ERG26	P53199	349 aa	Known RBP	4.62	□□□□□ -1.67
PTC1	YDL006W	YGR066C	P53242	292 aa		4.62	□□□□□ -1.67
PTC1	YDL006W	RBG2	P53295	368 aa	Known RBP	4.62	□□□□□ -1.67
PTC1	YDL006W	ARE2	P53629	642 aa	Known RBP	4.62	□□□□□ -1.67
PTC1	YDL006W	CTL1	Q03220	320 aa	Known RBP	4.62	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 29.6 ms