RNA–Protein interactions for RNA: YBR258C

SHG1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SHG1, Length 429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHG1YBR258C RPT4P53549 437 aaKnown RBP3.24□□□□□ -1.89
SHG1YBR258C YNL181WP53878 407 aa3.24□□□□□ -1.89
SHG1YBR258C VPS72Q03388 795 aa3.24□□□□□ -1.89
SHG1YBR258C ALE1Q08548 619 aa3.24□□□□□ -1.89
SHG1YBR258C CSF1Q12150 2958 aa3.24□□□□□ -1.89
SHG1YBR258C LEU9Q12166 604 aaKnown RBP3.24□□□□□ -1.89
SHG1YBR258C ICT1Q12385 394 aa3.24□□□□□ -1.89
SHG1YBR258C PUT2P07275 575 aa3.23□□□□□ -1.89
SHG1YBR258C SEC53P07283 254 aaKnown RBP3.23□□□□□ -1.89
SHG1YBR258C MET8P15807 274 aa3.23□□□□□ -1.89
SHG1YBR258C BUD5P25300 642 aaPredicted RBP3.23□□□□□ -1.89
SHG1YBR258C ATO2P32907 282 aa3.23□□□□□ -1.89
SHG1YBR258C NUP133P36161 1157 aa3.23□□□□□ -1.89
SHG1YBR258C EFM2P38347 419 aa3.23□□□□□ -1.89
SHG1YBR258C ECM29P38737 1868 aa3.23□□□□□ -1.89
SHG1YBR258C BUR6P40096 142 aa3.23□□□□□ -1.89
SHG1YBR258C GAT1P43574 510 aa3.23□□□□□ -1.89
SHG1YBR258C FAR3P46671 204 aa3.23□□□□□ -1.89
SHG1YBR258C IRC8P47046 822 aa3.23□□□□□ -1.89
SHG1YBR258C GLO1P50107 326 aa3.23□□□□□ -1.89
SHG1YBR258C PYK2P52489 506 aaKnown RBP3.23□□□□□ -1.89
SHG1YBR258C ERG26P53199 349 aaKnown RBP3.23□□□□□ -1.89
SHG1YBR258C VPS75P53853 264 aa3.23□□□□□ -1.89
SHG1YBR258C CTL1Q03220 320 aaKnown RBP3.23□□□□□ -1.89
SHG1YBR258C YML037CQ03703 340 aa3.23□□□□□ -1.89
SHG1YBR258C EMI2Q04409 500 aaKnown RBP3.23□□□□□ -1.89
SHG1YBR258C UTP21Q06078 939 aaPredicted RBP3.23□□□□□ -1.89
SHG1YBR258C YEH1Q07804 573 aa3.23□□□□□ -1.89
SHG1YBR258C DSE3Q08729 430 aa3.23□□□□□ -1.89
SHG1YBR258C YLR112WQ12130 139 aa3.23□□□□□ -1.89
SHG1YBR258C HUA2Q12134 243 aa3.23□□□□□ -1.89
SHG1YBR258C MF(ALPHA)1P01149 165 aa3.22□□□□□ -1.89
SHG1YBR258C SSE2P32590 693 aaKnown RBP3.22□□□□□ -1.89
SHG1YBR258C YPK3P38070 525 aa3.22□□□□□ -1.89
SHG1YBR258C SPL2P38839 148 aa3.22□□□□□ -1.89
SHG1YBR258C RGI2P40188 164 aa3.22□□□□□ -1.89
SHG1YBR258C RPS10BP46784 105 aaKnown RBP3.22□□□□□ -1.89
SHG1YBR258C MRX6P48564 524 aa3.22□□□□□ -1.89
SHG1YBR258C SGF73P53165 657 aa3.22□□□□□ -1.89
SHG1YBR258C BET4Q00618 327 aa3.22□□□□□ -1.89
SHG1YBR258C MSC1Q03104 513 aa3.22□□□□□ -1.89
SHG1YBR258C RSF1Q05043 376 aa3.22□□□□□ -1.89
SHG1YBR258C LUC7Q07508 261 aaPredicted RBP3.22□□□□□ -1.89
SHG1YBR258C RPS10AQ08745 105 aaPredicted RBP3.22□□□□□ -1.89
SHG1YBR258C RTP1Q12751 981 aa3.22□□□□□ -1.89
SHG1YBR258C YJR112W-AQ3E743 109 aa3.22□□□□□ -1.89
SHG1YBR258C YPT6Q99260 215 aa3.22□□□□□ -1.89
SHG1YBR258C GCN4P03069 281 aa3.21□□□□□ -1.9
SHG1YBR258C RPB8P20436 146 aa3.21□□□□□ -1.9
SHG1YBR258C POL4P25615 582 aa3.21□□□□□ -1.9
SHG1YBR258C YBL055CP34220 418 aaPredicted RBP3.21□□□□□ -1.9
SHG1YBR258C SCO2P38072 301 aa3.21□□□□□ -1.9
SHG1YBR258C DBP8P38719 431 aa3.21□□□□□ -1.9
SHG1YBR258C ESL1P40456 1118 aa3.21□□□□□ -1.9
SHG1YBR258C YIL060WP40519 144 aa3.21□□□□□ -1.9
SHG1YBR258C YIR016WP40572 265 aa3.21□□□□□ -1.9
SHG1YBR258C IAH1P41734 238 aa3.21□□□□□ -1.9
SHG1YBR258C YGR127WP53275 312 aa3.21□□□□□ -1.9
SHG1YBR258C ARE2P53629 642 aaKnown RBP3.21□□□□□ -1.9
SHG1YBR258C ESBP6P53918 673 aa3.21□□□□□ -1.9
SHG1YBR258C BOP3P53958 396 aa3.21□□□□□ -1.9
SHG1YBR258C MPS1P54199 764 aa3.21□□□□□ -1.9
SHG1YBR258C IZH1Q03419 316 aa3.21□□□□□ -1.9
SHG1YBR258C YLR281CQ05863 155 aa3.21□□□□□ -1.9
SHG1YBR258C COG4Q06096 861 aa3.21□□□□□ -1.9
SHG1YBR258C FMP40Q08968 688 aaPredicted RBP3.21□□□□□ -1.9
SHG1YBR258C RCN2Q12044 265 aa3.21□□□□□ -1.9
SHG1YBR258C ARG81P05085 880 aa3.2□□□□□ -1.9
SHG1YBR258C RPL42AP0CX27 106 aaKnown RBP3.2□□□□□ -1.9
SHG1YBR258C RPL42BP0CX28 106 aaKnown RBP3.2□□□□□ -1.9
SHG1YBR258C MRP7P12687 371 aa3.2□□□□□ -1.9
SHG1YBR258C KGD1P20967 1014 aaKnown RBP3.2□□□□□ -1.9
SHG1YBR258C LCB1P25045 558 aaKnown RBP3.2□□□□□ -1.9
SHG1YBR258C GID7P25569 745 aa3.2□□□□□ -1.9
SHG1YBR258C MTR2P34232 184 aaKnown RBP3.2□□□□□ -1.9
SHG1YBR258C YKL100CP34248 587 aa3.2□□□□□ -1.9
SHG1YBR258C YBR225WP38321 900 aa3.2□□□□□ -1.9
SHG1YBR258C ARC40P38328 384 aaKnown RBP3.2□□□□□ -1.9
SHG1YBR258C RTS2P40962 232 aa3.2□□□□□ -1.9
SHG1YBR258C DSD1P53095 428 aa3.2□□□□□ -1.9
SHG1YBR258C PKP2P53170 491 aa3.2□□□□□ -1.9
SHG1YBR258C SOL4P53315 255 aa3.2□□□□□ -1.9
SHG1YBR258C EKI1Q03764 534 aa3.2□□□□□ -1.9
SHG1YBR258C BUD22Q04347 519 aaKnown RBP3.2□□□□□ -1.9
SHG1YBR258C DPB4Q04603 196 aaKnown RBP3.2□□□□□ -1.9
SHG1YBR258C GRC3Q07845 632 aa3.2□□□□□ -1.9
SHG1YBR258C TEN1Q07921 160 aa3.2□□□□□ -1.9
SHG1YBR258C SRL1Q08673 210 aa3.2□□□□□ -1.9
SHG1YBR258C APL5Q08951 932 aaKnown RBP3.2□□□□□ -1.9
SHG1YBR258C PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.2□□□□□ -1.9not detected
SHG1YBR258C DFR1P07807 211 aaKnown RBP RIP-Chip data3.19□□□□□ -1.9not detected
SHG1YBR258C BOS1P25385 244 aa3.19□□□□□ -1.9
SHG1YBR258C CMK1P27466 446 aaKnown RBP3.19□□□□□ -1.9
SHG1YBR258C POT1P27796 417 aaKnown RBP RIP-Chip data3.19□□□□□ -1.9not detected
SHG1YBR258C RPN12P32496 274 aa3.19□□□□□ -1.9
SHG1YBR258C TIF3P34167 436 aaKnown RBP3.19□□□□□ -1.9
SHG1YBR258C YBR144CP34215 104 aa3.19□□□□□ -1.9
SHG1YBR258C SPC34P36131 295 aa3.19□□□□□ -1.9
SHG1YBR258C ANS1P38832 159 aa3.19□□□□□ -1.9
SHG1YBR258C UTP9P38882 575 aaKnown RBP3.19□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms