RNA–Protein interactions for RNA: YAR007C

RFA1, Transcript of Subunit of heterotrimeric Replication Protein A (RPA), yeastyeast

Gene RFA1, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RFA1YAR007C NEJ1Q06148 342 aa5.39□□□□□ -1.55
RFA1YAR007C COS7Q07788 383 aa5.39□□□□□ -1.55
RFA1YAR007C RRG1Q12167 365 aaPredicted RBP5.39□□□□□ -1.55
RFA1YAR007C HOS1Q12214 470 aa5.39□□□□□ -1.55
RFA1YAR007C RBD2Q12270 262 aa5.39□□□□□ -1.55
RFA1YAR007C ATG34Q12292 412 aa5.39□□□□□ -1.55
RFA1YAR007C FRT1Q99332 602 aa5.39□□□□□ -1.55
RFA1YAR007C ARG81P05085 880 aa5.38□□□□□ -1.55
RFA1YAR007C RAD7P06779 565 aa5.38□□□□□ -1.55
RFA1YAR007C RPL4AP10664 362 aaKnown RBP5.38□□□□□ -1.55
RFA1YAR007C YPK1P12688 680 aaKnown RBP5.38□□□□□ -1.55
RFA1YAR007C ATP12P22135 325 aa5.38□□□□□ -1.55
RFA1YAR007C YCR090CP25654 182 aaKnown RBP5.38□□□□□ -1.55
RFA1YAR007C CIN8P27895 1000 aa5.38□□□□□ -1.55
RFA1YAR007C TGL1P34163 548 aa5.38□□□□□ -1.55
RFA1YAR007C LRG1P35688 1017 aa5.38□□□□□ -1.55
RFA1YAR007C ABZ1P37254 787 aaPredicted RBP5.38□□□□□ -1.55
RFA1YAR007C VID24P38263 362 aa5.38□□□□□ -1.55
RFA1YAR007C HSL7P38274 827 aa5.38□□□□□ -1.55
RFA1YAR007C LEU5P38702 357 aa5.38□□□□□ -1.55
RFA1YAR007C RIM4P38741 713 aa5.38□□□□□ -1.55
RFA1YAR007C PPE1P38796 400 aa5.38□□□□□ -1.55
RFA1YAR007C LYS9P38999 446 aa5.38□□□□□ -1.55
RFA1YAR007C YEN1P40028 759 aa5.38□□□□□ -1.55
RFA1YAR007C COA1P40452 197 aa5.38□□□□□ -1.55
RFA1YAR007C LYS4P49367 693 aaPredicted RBP5.38□□□□□ -1.55
RFA1YAR007C RPL4BP49626 362 aaKnown RBP5.38□□□□□ -1.55
RFA1YAR007C CUL3P53202 744 aa5.38□□□□□ -1.55
RFA1YAR007C TPO2P53283 614 aa5.38□□□□□ -1.55
RFA1YAR007C RSM28Q03430 361 aa5.38□□□□□ -1.55
RFA1YAR007C ARX1Q03862 593 aaKnown RBP5.38□□□□□ -1.55
RFA1YAR007C CRN1Q06440 651 aa5.38□□□□□ -1.55
RFA1YAR007C SWA2Q06677 668 aa5.38□□□□□ -1.55
RFA1YAR007C DIS3Q08162 1001 aaKnown RBP5.38□□□□□ -1.55
RFA1YAR007C PEX27Q08580 376 aa5.38□□□□□ -1.55
RFA1YAR007C ATP1P07251 545 aaKnown RBP5.37□□□□□ -1.55
RFA1YAR007C PET494P07390 489 aaPredicted RBP5.37□□□□□ -1.55
RFA1YAR007C ASP3-2P0CX77 362 aa5.37□□□□□ -1.55
RFA1YAR007C ASP3-3P0CX78 362 aa5.37□□□□□ -1.55
RFA1YAR007C ASP3-4P0CX79 362 aa5.37□□□□□ -1.55
RFA1YAR007C ASP3-1P0CZ17 362 aa5.37□□□□□ -1.55
RFA1YAR007C PEX1P24004 1043 aa5.37□□□□□ -1.55
RFA1YAR007C ATG22P25568 528 aa5.37□□□□□ -1.55
RFA1YAR007C SYN8P31377 255 aa5.37□□□□□ -1.55
RFA1YAR007C MRS6P32864 603 aaKnown RBP5.37□□□□□ -1.55
RFA1YAR007C SHP1P34223 423 aa5.37□□□□□ -1.55
RFA1YAR007C MRPL17P36528 281 aa5.37□□□□□ -1.55
RFA1YAR007C AHP1P38013 176 aaKnown RBP5.37□□□□□ -1.55
RFA1YAR007C YMC2P38087 329 aa5.37□□□□□ -1.55
RFA1YAR007C SDH8P38345 138 aa5.37□□□□□ -1.55
RFA1YAR007C NAB3P38996 802 aaKnown RBP RIP-Chip data5.37□□□□□ -1.55not detected
RFA1YAR007C YAR028WP39548 234 aa5.37□□□□□ -1.55
RFA1YAR007C PHM8P40025 321 aa5.37□□□□□ -1.55
RFA1YAR007C MNN5P46982 586 aa5.37□□□□□ -1.55
RFA1YAR007C IRC18P47056 224 aa5.37□□□□□ -1.55
RFA1YAR007C MTC3P53077 123 aa5.37□□□□□ -1.55
RFA1YAR007C COG1P53079 417 aa5.37□□□□□ -1.55
RFA1YAR007C NCS6P53088 359 aa5.37□□□□□ -1.55
RFA1YAR007C MRH4P53166 561 aa5.37□□□□□ -1.55
RFA1YAR007C VAC7P53950 1165 aa5.37□□□□□ -1.55
RFA1YAR007C ALG11P53954 548 aaKnown RBP5.37□□□□□ -1.55
RFA1YAR007C RSC4Q02206 625 aa5.37□□□□□ -1.55
RFA1YAR007C ENT5Q03769 411 aaKnown RBP5.37□□□□□ -1.55
RFA1YAR007C NHX1Q04121 633 aa5.37□□□□□ -1.55
RFA1YAR007C YLR346CQ06139 101 aa5.37□□□□□ -1.55
RFA1YAR007C DXO1Q06349 442 aa5.37□□□□□ -1.55
RFA1YAR007C YNG1Q08465 219 aa5.37□□□□□ -1.55
RFA1YAR007C HRK1Q08732 759 aaKnown RBP5.37□□□□□ -1.55
RFA1YAR007C MDY2Q12285 212 aa5.37□□□□□ -1.55
RFA1YAR007C PST2Q12335 198 aaKnown RBP5.37□□□□□ -1.55
RFA1YAR007C COS2P0CX12 379 aa5.37□□□□□ -1.55
RFA1YAR007C COS3P0CX13 379 aa5.37□□□□□ -1.55
RFA1YAR007C GLN4P13188 809 aaKnown RBP5.37□□□□□ -1.55
RFA1YAR007C RHB1P25378 209 aa5.37□□□□□ -1.55
RFA1YAR007C VBA3P25594 458 aa5.37□□□□□ -1.55
RFA1YAR007C MRPL6P32904 214 aa5.37□□□□□ -1.55
RFA1YAR007C VBA5P36172 582 aa5.37□□□□□ -1.55
RFA1YAR007C NOP4P37838 685 aaKnown RBP5.37□□□□□ -1.55
RFA1YAR007C KTR4P38131 464 aa5.37□□□□□ -1.55
RFA1YAR007C FMP23P38231 175 aa5.37□□□□□ -1.55
RFA1YAR007C SRP68P38687 599 aaKnown RBP5.37□□□□□ -1.55
RFA1YAR007C YHR131CP38835 850 aa5.37□□□□□ -1.55
RFA1YAR007C EAF5P39995 279 aa5.37□□□□□ -1.55
RFA1YAR007C ALD5P40047 520 aaKnown RBP5.37□□□□□ -1.55
RFA1YAR007C ATM1P40416 690 aa5.37□□□□□ -1.55
RFA1YAR007C SEC28P40509 296 aaKnown RBP5.37□□□□□ -1.55
RFA1YAR007C ALR2P43553 858 aa5.37□□□□□ -1.55
RFA1YAR007C GCD14P46959 383 aaPredicted RBP5.37□□□□□ -1.55
RFA1YAR007C TPN1P53099 579 aa5.37□□□□□ -1.55
RFA1YAR007C DAM1P53267 343 aa5.37□□□□□ -1.55
RFA1YAR007C PEX13P80667 386 aa5.37□□□□□ -1.55
RFA1YAR007C PRP38Q00723 242 aaPredicted RBP5.37□□□□□ -1.55
RFA1YAR007C REG1Q00816 1014 aa5.37□□□□□ -1.55
RFA1YAR007C CEG1Q01159 459 aaPredicted RBP5.37□□□□□ -1.55
RFA1YAR007C NUP49Q02199 472 aa5.37□□□□□ -1.55
RFA1YAR007C SMA1Q02651 245 aa5.37□□□□□ -1.55
RFA1YAR007C BSC2Q05611 235 aa5.37□□□□□ -1.55
RFA1YAR007C DUS3Q06053 668 aaKnown RBP5.37□□□□□ -1.55
RFA1YAR007C YLR413WQ06689 675 aa5.37□□□□□ -1.55
RFA1YAR007C SUB2Q07478 446 aaKnown RBP5.37□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 108.5 ms