RNA–Protein interactions for RNA: ENST00000640360.1

SLC35A3-220, Transcript of solute carrier family 35 member A3, humanhuman

TSL 5

Gene SLC35A3, Length 4,437 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC35A3-220ENST00000640360 ADAMTS7Q9UKP4 1686 aa11.78□□□□□ -0.52
SLC35A3-220ENST00000640360 E9PMD0 336 aa11.78□□□□□ -0.52
SLC35A3-220ENST00000640360 TPM1P09493 284 aa11.78□□□□□ -0.52
SLC35A3-220ENST00000640360 COPB2P35606 906 aa11.78□□□□□ -0.52
SLC35A3-220ENST00000640360 ZNF512BQ96KM6 892 aaPredicted RBP11.78□□□□□ -0.52
SLC35A3-220ENST00000640360 EYA3Q99504 573 aa11.78□□□□□ -0.52
SLC35A3-220ENST00000640360 DEF6Q9H4E7 631 aa11.78□□□□□ -0.52
SLC35A3-220ENST00000640360 BSDC1Q9NW68 430 aaPredicted RBP11.78□□□□□ -0.52
SLC35A3-220ENST00000640360 MYMKA6NI61 221 aa11.78□□□□□ -0.52
SLC35A3-220ENST00000640360 UFL1O94874 794 aa11.78□□□□□ -0.52
SLC35A3-220ENST00000640360 USH1GQ495M9 461 aa11.78□□□□□ -0.52
SLC35A3-220ENST00000640360 ZNF658Q5TYW1 1059 aaPredicted RBP11.78□□□□□ -0.52
SLC35A3-220ENST00000640360 RABGGTAQ92696 567 aa11.78□□□□□ -0.52
SLC35A3-220ENST00000640360 ADSSL1Q8N142 457 aa11.77□□□□□ -0.52
SLC35A3-220ENST00000640360 OR8K1Q8NGG5 319 aa11.77□□□□□ -0.52
SLC35A3-220ENST00000640360 PKD2L1Q9P0L9 805 aa11.77□□□□□ -0.52
SLC35A3-220ENST00000640360 L1RE1Q9UN81 338 aa11.77□□□□□ -0.52
SLC35A3-220ENST00000640360 CDH23Q9H251 3354 aa11.77□□□□□ -0.53
SLC35A3-220ENST00000640360 KRT14P02533 472 aa11.77□□□□□ -0.53
SLC35A3-220ENST00000640360 CNGA4Q8IV77 575 aa11.77□□□□□ -0.53
SLC35A3-220ENST00000640360 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.77□□□□□ -0.53
SLC35A3-220ENST00000640360 GTPBP6O43824 516 aaPredicted RBP11.77□□□□□ -0.53
SLC35A3-220ENST00000640360 EIF4A3P38919 411 aaKnown RBP11.77□□□□□ -0.53
SLC35A3-220ENST00000640360 KCNA1Q09470 495 aa11.77□□□□□ -0.53
SLC35A3-220ENST00000640360 MFSD14BQ5SR56 506 aa11.77□□□□□ -0.53
SLC35A3-220ENST00000640360 NAA35Q5VZE5 725 aa11.77□□□□□ -0.53
SLC35A3-220ENST00000640360 GJB7Q6PEY0 223 aa11.77□□□□□ -0.53
SLC35A3-220ENST00000640360 CYP26C1Q6V0L0 522 aa11.77□□□□□ -0.53
SLC35A3-220ENST00000640360 FAM196AQ6ZSG2 479 aa11.77□□□□□ -0.53
SLC35A3-220ENST00000640360 CCDC84Q86UT8 332 aaPredicted RBP11.77□□□□□ -0.53
SLC35A3-220ENST00000640360 TEX11Q8IYF3 940 aa11.77□□□□□ -0.53
SLC35A3-220ENST00000640360 CYP2W1Q8TAV3 490 aa11.77□□□□□ -0.53
SLC35A3-220ENST00000640360 PANX2Q96RD6 677 aa11.77□□□□□ -0.53
SLC35A3-220ENST00000640360 MMTAG2Q9BU76 263 aaKnown RBP11.77□□□□□ -0.53
SLC35A3-220ENST00000640360 WDR19Q8NEZ3 1342 aa11.77□□□□□ -0.53
SLC35A3-220ENST00000640360 ZNF142P52746 1687 aaPredicted RBP11.77□□□□□ -0.53
SLC35A3-220ENST00000640360 XIRP2A4UGR9 3374 aa11.77□□□□□ -0.53
SLC35A3-220ENST00000640360 LRRN2O75325 713 aa11.76□□□□□ -0.53
SLC35A3-220ENST00000640360 RASA1P20936 1047 aa11.76□□□□□ -0.53
SLC35A3-220ENST00000640360 POLD1P28340 1107 aa11.76□□□□□ -0.53
SLC35A3-220ENST00000640360 SND1Q7KZF4 910 aaKnown RBP eCLIP11.76□□□□□ -0.53
SLC35A3-220ENST00000640360 DDX42Q86XP3 938 aaKnown RBP eCLIP11.76□□□□□ -0.53
SLC35A3-220ENST00000640360 ARHGAP20Q9P2F6 1191 aa11.76□□□□□ -0.53
SLC35A3-220ENST00000640360 PCDHA4Q9UN74 947 aa11.76□□□□□ -0.53
SLC35A3-220ENST00000640360 RTL9Q8NET4 1388 aa11.76□□□□□ -0.53
SLC35A3-220ENST00000640360 LRRC53A6NM62 1247 aa11.76□□□□□ -0.53
SLC35A3-220ENST00000640360 STXBP3O00186 592 aa11.76□□□□□ -0.53
SLC35A3-220ENST00000640360 AKR1B10O60218 316 aa11.76□□□□□ -0.53
SLC35A3-220ENST00000640360 MSL1Q68DK7 614 aa11.76□□□□□ -0.53
SLC35A3-220ENST00000640360 ZNF579Q8NAF0 562 aaKnown RBP11.76□□□□□ -0.53
SLC35A3-220ENST00000640360 MAGEC2Q9UBF1 373 aaPredicted RBP11.76□□□□□ -0.53
SLC35A3-220ENST00000640360 RNF40O75150 1001 aa11.76□□□□□ -0.53
SLC35A3-220ENST00000640360 SLC1A4P43007 532 aa11.76□□□□□ -0.53
SLC35A3-220ENST00000640360 CDK8P49336 464 aa11.76□□□□□ -0.53
SLC35A3-220ENST00000640360 ZYXQ15942 572 aaKnown RBP11.76□□□□□ -0.53
SLC35A3-220ENST00000640360 C12orf60Q5U649 245 aa11.76□□□□□ -0.53
SLC35A3-220ENST00000640360 DPP8Q6V1X1 898 aaPredicted RBP11.76□□□□□ -0.53
SLC35A3-220ENST00000640360 FBXO33Q7Z6M2 555 aa11.76□□□□□ -0.53
SLC35A3-220ENST00000640360 FERMT2Q96AC1 680 aa11.76□□□□□ -0.53
SLC35A3-220ENST00000640360 TRIM9Q9C026 710 aa11.76□□□□□ -0.53
SLC35A3-220ENST00000640360 EXOC1Q9NV70 894 aa11.76□□□□□ -0.53
SLC35A3-220ENST00000640360 RTCBQ9Y3I0 505 aaKnown RBP11.76□□□□□ -0.53
SLC35A3-220ENST00000640360 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.76□□□□□ -0.53
SLC35A3-220ENST00000640360 KDM4FA0A1W2PPD8 638 aa11.76□□□□□ -0.53
SLC35A3-220ENST00000640360 AKR1B1P15121 316 aa11.76□□□□□ -0.53
SLC35A3-220ENST00000640360 TTI2Q6NXR4 508 aa11.76□□□□□ -0.53
SLC35A3-220ENST00000640360 KANK3Q6NY19 840 aa11.76□□□□□ -0.53
SLC35A3-220ENST00000640360 OR2W6PQ8NHA6 318 aa11.76□□□□□ -0.53
SLC35A3-220ENST00000640360 CCDC42Q96M95 316 aa11.76□□□□□ -0.53
SLC35A3-220ENST00000640360 ITGB4P16144 1822 aa11.75□□□□□ -0.53
SLC35A3-220ENST00000640360 ZEB2O60315 1214 aa11.75□□□□□ -0.53
SLC35A3-220ENST00000640360 GPSM2P81274 684 aa11.75□□□□□ -0.53
SLC35A3-220ENST00000640360 NFIAQ12857 509 aa11.75□□□□□ -0.53
SLC35A3-220ENST00000640360 TSR1Q2NL82 804 aaKnown RBP11.75□□□□□ -0.53
SLC35A3-220ENST00000640360 RDH13Q8NBN7 331 aa11.75□□□□□ -0.53
SLC35A3-220ENST00000640360 RWDD2AQ9UIY3 292 aa11.75□□□□□ -0.53
SLC35A3-220ENST00000640360 CCNL1Q9UK58 526 aaPredicted RBP11.75□□□□□ -0.53
SLC35A3-220ENST00000640360 SAR1BQ9Y6B6 198 aa11.75□□□□□ -0.53
SLC35A3-220ENST00000640360 USP54Q70EL1 1684 aa11.75□□□□□ -0.53
SLC35A3-220ENST00000640360 EIF3JO75822 258 aaKnown RBP11.75□□□□□ -0.53
SLC35A3-220ENST00000640360 FAM153BP0C7A2 387 aa11.75□□□□□ -0.53
SLC35A3-220ENST00000640360 FAM153CQ494X1 144 aa11.75□□□□□ -0.53
SLC35A3-220ENST00000640360 TRIM31Q9BZY9 425 aa11.75□□□□□ -0.53
SLC35A3-220ENST00000640360 FAM153AQ9UHL3 310 aa11.75□□□□□ -0.53
SLC35A3-220ENST00000640360 HOXA13P31271 388 aaPredicted RBP11.75□□□□□ -0.53
SLC35A3-220ENST00000640360 PSMC6P62333 389 aa11.75□□□□□ -0.53
SLC35A3-220ENST00000640360 MAP9Q49MG5 647 aa11.75□□□□□ -0.53
SLC35A3-220ENST00000640360 KLHL7Q8IXQ5 586 aa11.75□□□□□ -0.53
SLC35A3-220ENST00000640360 MTMR8Q96EF0 704 aa11.75□□□□□ -0.53
SLC35A3-220ENST00000640360 LRRC4CQ9HCJ2 640 aa11.75□□□□□ -0.53
SLC35A3-220ENST00000640360 DDX4Q9NQI0 724 aaKnown RBP11.75□□□□□ -0.53
SLC35A3-220ENST00000640360 EDIL3O43854 480 aa11.74□□□□□ -0.53
SLC35A3-220ENST00000640360 UBE4AQ14139 1066 aa11.74□□□□□ -0.53
SLC35A3-220ENST00000640360 ZNF622Q969S3 477 aaKnown RBP eCLIP11.74□□□□□ -0.53
SLC35A3-220ENST00000640360 ADAMTS1Q9UHI8 967 aa11.74□□□□□ -0.53
SLC35A3-220ENST00000640360 ATRNO75882 1429 aa11.74□□□□□ -0.53
SLC35A3-220ENST00000640360 USP17L10C9JJH3 530 aa11.74□□□□□ -0.53
SLC35A3-220ENST00000640360 PSMA7O14818 248 aa11.74□□□□□ -0.53
SLC35A3-220ENST00000640360 TM4SF1P30408 202 aa11.74□□□□□ -0.53
SLC35A3-220ENST00000640360 MIIPQ5JXC2 388 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms