RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 KLRF2D3W0D1 207 aa18.47■□□□□ 0.55
HNRNPU-228ENST00000640306 ZNF263O14978 683 aa18.47■□□□□ 0.55
HNRNPU-228ENST00000640306 GRM4Q14833 912 aa18.47■□□□□ 0.55
HNRNPU-228ENST00000640306 NLRP3Q96P20 1036 aa18.47■□□□□ 0.55
HNRNPU-228ENST00000640306 BARHL2Q9NY43 387 aa18.47■□□□□ 0.55
HNRNPU-228ENST00000640306 EHD2Q9NZN4 543 aa18.47■□□□□ 0.55
HNRNPU-228ENST00000640306 BIN2Q9UBW5 565 aaPredicted RBP18.47■□□□□ 0.55
HNRNPU-228ENST00000640306 MYO1CO00159 1063 aa18.46■□□□□ 0.55
HNRNPU-228ENST00000640306 TXKP42681 527 aa18.46■□□□□ 0.55
HNRNPU-228ENST00000640306 TTYH3Q9C0H2 523 aa18.46■□□□□ 0.55
HNRNPU-228ENST00000640306 PSD3Q9NYI0 1048 aa18.46■□□□□ 0.55
HNRNPU-228ENST00000640306 A0A1B0GUL6 1792 aa18.46■□□□□ 0.55
HNRNPU-228ENST00000640306 SBK1Q52WX2 424 aa18.46■□□□□ 0.55
HNRNPU-228ENST00000640306 WDR93Q6P2C0 686 aa18.46■□□□□ 0.55
HNRNPU-228ENST00000640306 DGKHQ86XP1 1220 aa18.46■□□□□ 0.55
HNRNPU-228ENST00000640306 C2CD5Q86YS7 1000 aa18.46■□□□□ 0.55
HNRNPU-228ENST00000640306 FAM71BQ8TC56 605 aa18.46■□□□□ 0.55
HNRNPU-228ENST00000640306 CCDC42Q96M95 316 aa18.46■□□□□ 0.55
HNRNPU-228ENST00000640306 UBA5Q9GZZ9 404 aa18.46■□□□□ 0.55
HNRNPU-228ENST00000640306 RABEP2Q9H5N1 569 aa18.46■□□□□ 0.55
HNRNPU-228ENST00000640306 CWC15Q9P013 229 aaKnown RBP18.46■□□□□ 0.55
HNRNPU-228ENST00000640306 ANKIB1Q9P2G1 1089 aa18.46■□□□□ 0.55
HNRNPU-228ENST00000640306 GOLGB1Q14789 3259 aaKnown RBP18.46■□□□□ 0.55
HNRNPU-228ENST00000640306 OR52Z1P0C646 297 aa18.46■□□□□ 0.55
HNRNPU-228ENST00000640306 CCNE1P24864 410 aa18.46■□□□□ 0.55
HNRNPU-228ENST00000640306 DNA2P51530 1060 aa18.46■□□□□ 0.55
HNRNPU-228ENST00000640306 MIIPQ5JXC2 388 aa18.46■□□□□ 0.55
HNRNPU-228ENST00000640306 CCSER1Q9C0I3 900 aa18.46■□□□□ 0.55
HNRNPU-228ENST00000640306 MMRN2Q9H8L6 949 aa18.46■□□□□ 0.55
HNRNPU-228ENST00000640306 TMEM260Q9NX78 707 aa18.46■□□□□ 0.55
HNRNPU-228ENST00000640306 RSPH14Q9UHP6 348 aa18.46■□□□□ 0.55
HNRNPU-228ENST00000640306 CAPN6Q9Y6Q1 641 aa18.46■□□□□ 0.55
HNRNPU-228ENST00000640306 FLT1P17948 1338 aa18.46■□□□□ 0.55
HNRNPU-228ENST00000640306 SMCO2A6NFE2 343 aa18.45■□□□□ 0.54
HNRNPU-228ENST00000640306 SYF2O95926 243 aaKnown RBP18.45■□□□□ 0.54
HNRNPU-228ENST00000640306 KIF5AQ12840 1032 aa18.45■□□□□ 0.54
HNRNPU-228ENST00000640306 PAPD7Q5XG87 772 aaKnown RBP18.45■□□□□ 0.54
HNRNPU-228ENST00000640306 HDAC7Q8WUI4 952 aa18.45■□□□□ 0.54
HNRNPU-228ENST00000640306 LDHBP07195 334 aaKnown RBP18.45■□□□□ 0.54
HNRNPU-228ENST00000640306 ZBED6P86452 979 aa18.45■□□□□ 0.54
HNRNPU-228ENST00000640306 MEA1Q16626 185 aa18.45■□□□□ 0.54
HNRNPU-228ENST00000640306 POTEDQ86YR6 584 aa18.45■□□□□ 0.54
HNRNPU-228ENST00000640306 SEPT12Q8IYM1 358 aa18.45■□□□□ 0.54
HNRNPU-228ENST00000640306 CCDC155Q8N6L0 562 aa18.45■□□□□ 0.54
HNRNPU-228ENST00000640306 KIAA0895Q8NCT3 520 aa18.45■□□□□ 0.54
HNRNPU-228ENST00000640306 SH3GLB2Q9NR46 395 aa18.45■□□□□ 0.54
HNRNPU-228ENST00000640306 MOCS3O95396 460 aa18.44■□□□□ 0.54
HNRNPU-228ENST00000640306 TUBB4BP68371 445 aa18.44■□□□□ 0.54
HNRNPU-228ENST00000640306 SLC7A5Q01650 507 aa18.44■□□□□ 0.54
HNRNPU-228ENST00000640306 COG1Q8WTW3 980 aa18.44■□□□□ 0.54
HNRNPU-228ENST00000640306 SECISBP2LQ93073 1101 aaKnown RBP18.44■□□□□ 0.54
HNRNPU-228ENST00000640306 DHTKD1Q96HY7 919 aaPredicted RBP18.44■□□□□ 0.54
HNRNPU-228ENST00000640306 SEMA6BQ9H3T3 888 aa18.44■□□□□ 0.54
HNRNPU-228ENST00000640306 HPCAL4Q9UM19 191 aa18.44■□□□□ 0.54
HNRNPU-228ENST00000640306 RRP15Q9Y3B9 282 aaKnown RBP18.44■□□□□ 0.54
HNRNPU-228ENST00000640306 GGCXP38435 758 aa18.44■□□□□ 0.54
HNRNPU-228ENST00000640306 SPA17Q15506 151 aa18.44■□□□□ 0.54
HNRNPU-228ENST00000640306 TBCKQ8TEA7 893 aa18.44■□□□□ 0.54
HNRNPU-228ENST00000640306 SMARCC1Q92922 1105 aaPredicted RBP18.44■□□□□ 0.54
HNRNPU-228ENST00000640306 DEF6Q9H4E7 631 aa18.44■□□□□ 0.54
HNRNPU-228ENST00000640306 LRRC41Q15345 812 aa18.43■□□□□ 0.54
HNRNPU-228ENST00000640306 CLEC4GQ6UXB4 293 aa18.43■□□□□ 0.54
HNRNPU-228ENST00000640306 GLIS3Q8NEA6 775 aa18.43■□□□□ 0.54
HNRNPU-228ENST00000640306 SETDB2Q96T68 719 aa18.43■□□□□ 0.54
HNRNPU-228ENST00000640306 ACBD3Q9H3P7 528 aa18.43■□□□□ 0.54
HNRNPU-228ENST00000640306 QTRT2Q9H974 415 aaKnown RBP18.43■□□□□ 0.54
HNRNPU-228ENST00000640306 NONOQ15233 471 aaKnown RBP eCLIP18.43■□□□□ 0.541e-9■■■□□ 18.6
HNRNPU-228ENST00000640306 GOLGA6L1Q8N7Z2 621 aa18.43■□□□□ 0.54
HNRNPU-228ENST00000640306 GJA10Q969M2 543 aa18.43■□□□□ 0.54
HNRNPU-228ENST00000640306 CCDC47Q96A33 483 aaKnown RBP18.43■□□□□ 0.54
HNRNPU-228ENST00000640306 NCK2O43639 380 aa18.43■□□□□ 0.54
HNRNPU-228ENST00000640306 GNAQP50148 359 aa18.43■□□□□ 0.54
HNRNPU-228ENST00000640306 PIGSQ96S52 555 aa18.43■□□□□ 0.54
HNRNPU-228ENST00000640306 CRACR2AQ9BSW2 395 aa18.43■□□□□ 0.54
HNRNPU-228ENST00000640306 SELENOOQ9BVL4 669 aa18.43■□□□□ 0.54
HNRNPU-228ENST00000640306 IFIH1Q9BYX4 1025 aaKnown RBP18.43■□□□□ 0.54
HNRNPU-228ENST00000640306 BICDL2A1A5D9 508 aa18.42■□□□□ 0.54
HNRNPU-228ENST00000640306 EIF3CLB5ME19 914 aaKnown RBP18.42■□□□□ 0.54
HNRNPU-228ENST00000640306 ZPR1O75312 459 aa18.42■□□□□ 0.54
HNRNPU-228ENST00000640306 NFRKBQ6P4R8 1299 aa18.42■□□□□ 0.54
HNRNPU-228ENST00000640306 SRLQ86TD4 932 aa18.42■□□□□ 0.54
HNRNPU-228ENST00000640306 EIF3CQ99613 913 aaKnown RBP18.42■□□□□ 0.54
HNRNPU-228ENST00000640306 MMTAG2Q9BU76 263 aaKnown RBP18.42■□□□□ 0.54
HNRNPU-228ENST00000640306 ARHGAP20Q9P2F6 1191 aa18.42■□□□□ 0.54
HNRNPU-228ENST00000640306 MKRN1Q9UHC7 482 aaKnown RBP18.42■□□□□ 0.54
HNRNPU-228ENST00000640306 FRMPD2Q68DX3 1309 aaPredicted RBP18.42■□□□□ 0.54
HNRNPU-228ENST00000640306 RASA1P20936 1047 aa18.42■□□□□ 0.54
HNRNPU-228ENST00000640306 EIF6P56537 245 aaKnown RBP18.42■□□□□ 0.54
HNRNPU-228ENST00000640306 LRRC31Q6UY01 552 aa18.42■□□□□ 0.54
HNRNPU-228ENST00000640306 RRAGAQ7L523 313 aa18.42■□□□□ 0.54
HNRNPU-228ENST00000640306 TRPC5Q9UL62 973 aaPredicted RBP18.42■□□□□ 0.54
HNRNPU-228ENST00000640306 PALM3A6NDB9 673 aaPredicted RBP18.41■□□□□ 0.54
HNRNPU-228ENST00000640306 POTEMA6NI47 508 aa18.41■□□□□ 0.54
HNRNPU-228ENST00000640306 AKR1B10O60218 316 aa18.41■□□□□ 0.54
HNRNPU-228ENST00000640306 EIF4A3P38919 411 aaKnown RBP18.41■□□□□ 0.54
HNRNPU-228ENST00000640306 VAV2P52735 878 aa18.41■□□□□ 0.54
HNRNPU-228ENST00000640306 CKAP4Q07065 602 aaKnown RBP18.41■□□□□ 0.54
HNRNPU-228ENST00000640306 NFIXQ14938 502 aa18.41■□□□□ 0.54
HNRNPU-228ENST00000640306 AMOTL1Q8IY63 956 aa18.41■□□□□ 0.54
HNRNPU-228ENST00000640306 EHBP1Q8NDI1 1231 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms