RNA–Protein interactions for RNA: ENST00000639599.1

TARDBP-231, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 1,283 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-231ENST00000639599 NOVP48745 357 aa17.23■□□□□ 0.35
TARDBP-231ENST00000639599 NT5C2P49902 561 aa17.23■□□□□ 0.35
TARDBP-231ENST00000639599 NKX3-2P78367 333 aa17.23■□□□□ 0.35
TARDBP-231ENST00000639599 PPP2R5BQ15173 497 aa17.23■□□□□ 0.35
TARDBP-231ENST00000639599 RAB30Q15771 203 aa17.23■□□□□ 0.35
TARDBP-231ENST00000639599 GPATCH4Q5T3I0 446 aaKnown RBP17.23■□□□□ 0.35
TARDBP-231ENST00000639599 ZNF589Q86UQ0 364 aaPredicted RBP17.23■□□□□ 0.35
TARDBP-231ENST00000639599 OR6J1Q8NGC5 347 aa17.23■□□□□ 0.35
TARDBP-231ENST00000639599 ZNF576Q9H609 170 aa17.23■□□□□ 0.35
TARDBP-231ENST00000639599 KAT14Q9H8E8 782 aa17.23■□□□□ 0.35
TARDBP-231ENST00000639599 IL23AQ9NPF7 189 aa17.23■□□□□ 0.35
TARDBP-231ENST00000639599 FGBP02675 491 aa17.22■□□□□ 0.35
TARDBP-231ENST00000639599 SDSP20132 328 aa17.22■□□□□ 0.35
TARDBP-231ENST00000639599 ZNF543Q08ER8 600 aa17.22■□□□□ 0.35
TARDBP-231ENST00000639599 USH1GQ495M9 461 aa17.22■□□□□ 0.35
TARDBP-231ENST00000639599 DUSP28Q4G0W2 176 aa17.22■□□□□ 0.35
TARDBP-231ENST00000639599 FAM47CQ5HY64 1035 aa17.22■□□□□ 0.35
TARDBP-231ENST00000639599 TMEM240Q5SV17 173 aa17.22■□□□□ 0.35
TARDBP-231ENST00000639599 TAPT1Q6NXT6 567 aa17.22■□□□□ 0.35
TARDBP-231ENST00000639599 ZNF365Q70YC5 407 aa17.22■□□□□ 0.35
TARDBP-231ENST00000639599 RPUSD2Q8IZ73 545 aaKnown RBP17.22■□□□□ 0.35
TARDBP-231ENST00000639599 PURBQ96QR8 312 aaKnown RBP17.22■□□□□ 0.35
TARDBP-231ENST00000639599 DDX49Q9Y6V7 483 aaKnown RBP17.22■□□□□ 0.35
TARDBP-231ENST00000639599 ASTN1O14525 1302 aa17.21■□□□□ 0.35
TARDBP-231ENST00000639599 NKRFO15226 690 aaKnown RBP eCLIP17.21■□□□□ 0.35
TARDBP-231ENST00000639599 CTAGE5O15320 804 aa17.21■□□□□ 0.35
TARDBP-231ENST00000639599 CCL23P55773 120 aa17.21■□□□□ 0.35
TARDBP-231ENST00000639599 PSMC6P62333 389 aa17.21■□□□□ 0.35
TARDBP-231ENST00000639599 SLC30A10Q6XR72 485 aa17.21■□□□□ 0.35
TARDBP-231ENST00000639599 CHD1LQ86WJ1 897 aa17.21■□□□□ 0.35
TARDBP-231ENST00000639599 ZKSCAN3Q9BRR0 538 aa17.21■□□□□ 0.35
TARDBP-231ENST00000639599 COL25A1Q9BXS0 654 aaPredicted RBP17.21■□□□□ 0.35
TARDBP-231ENST00000639599 SMCHD1A6NHR9 2005 aa17.21■□□□□ 0.35
TARDBP-231ENST00000639599 WDR19Q8NEZ3 1342 aa17.21■□□□□ 0.34
TARDBP-231ENST00000639599 ZBBXA8MT70 800 aa17.2■□□□□ 0.34
TARDBP-231ENST00000639599 CD4P01730 458 aa17.2■□□□□ 0.34
TARDBP-231ENST00000639599 GRIN2CQ14957 1233 aa17.2■□□□□ 0.34
TARDBP-231ENST00000639599 IMMTQ16891 758 aaKnown RBP17.2■□□□□ 0.34
TARDBP-231ENST00000639599 CWC27Q6UX04 472 aaKnown RBP17.2■□□□□ 0.34
TARDBP-231ENST00000639599 DGKHQ86XP1 1220 aa17.2■□□□□ 0.34
TARDBP-231ENST00000639599 TBC1D10CQ8IV04 446 aa17.2■□□□□ 0.34
TARDBP-231ENST00000639599 SLC43A3Q8NBI5 491 aa17.2■□□□□ 0.34
TARDBP-231ENST00000639599 DNERQ8NFT8 737 aa17.2■□□□□ 0.34
TARDBP-231ENST00000639599 MORC4Q8TE76 937 aa17.2■□□□□ 0.34
TARDBP-231ENST00000639599 SCFD2Q8WU76 684 aa17.2■□□□□ 0.34
TARDBP-231ENST00000639599 NOD1Q9Y239 953 aa17.2■□□□□ 0.34
TARDBP-231ENST00000639599 B4GALT4O60513 344 aa17.19■□□□□ 0.34
TARDBP-231ENST00000639599 GOLGA8HP0CJ92 632 aa17.19■□□□□ 0.34
TARDBP-231ENST00000639599 CHMP4BP1P59074 171 aa17.19■□□□□ 0.34
TARDBP-231ENST00000639599 RPS6P62753 249 aaKnown RBP17.19■□□□□ 0.34
TARDBP-231ENST00000639599 OTOP2Q7RTS6 562 aa17.19■□□□□ 0.34
TARDBP-231ENST00000639599 PNMA1Q8ND90 353 aa17.19■□□□□ 0.34
TARDBP-231ENST00000639599 HERVK_113Q902F9 699 aa17.19■□□□□ 0.34
TARDBP-231ENST00000639599 SYMPKQ92797 1274 aaKnown RBP17.19■□□□□ 0.34
TARDBP-231ENST00000639599 MTG1Q9BT17 334 aaPredicted RBP17.19■□□□□ 0.34
TARDBP-231ENST00000639599 PBX4Q9BYU1 374 aa17.19■□□□□ 0.34
TARDBP-231ENST00000639599 TRPV6Q9H1D0 765 aa17.19■□□□□ 0.34
TARDBP-231ENST00000639599 ALDH8A1Q9H2A2 487 aaPredicted RBP17.19■□□□□ 0.34
TARDBP-231ENST00000639599 CTNNA3Q9UI47 895 aa17.19■□□□□ 0.34
TARDBP-231ENST00000639599 NEDD4P46934 1319 aa17.19■□□□□ 0.34
TARDBP-231ENST00000639599 KPNA6O60684 536 aa17.18■□□□□ 0.34
TARDBP-231ENST00000639599 KDM4AO75164 1064 aa17.18■□□□□ 0.34
TARDBP-231ENST00000639599 PTGS1P23219 599 aa17.18■□□□□ 0.34
TARDBP-231ENST00000639599 TTLL4Q14679 1199 aa17.18■□□□□ 0.34
TARDBP-231ENST00000639599 CDC37Q16543 378 aaPredicted RBP17.18■□□□□ 0.34
TARDBP-231ENST00000639599 MCF2L2Q86YR7 1114 aa17.18■□□□□ 0.34
TARDBP-231ENST00000639599 PPM1EQ8WY54 764 aa17.18■□□□□ 0.34
TARDBP-231ENST00000639599 UBAC1Q9BSL1 405 aa17.18■□□□□ 0.34
TARDBP-231ENST00000639599 NOC4LQ9BVI4 516 aaKnown RBP17.18■□□□□ 0.34
TARDBP-231ENST00000639599 SLC28A3Q9HAS3 691 aa17.18■□□□□ 0.34
TARDBP-231ENST00000639599 GRXCR1A8MXD5 290 aa17.17■□□□□ 0.34
TARDBP-231ENST00000639599 TXNP10599 105 aaKnown RBP17.17■□□□□ 0.34
TARDBP-231ENST00000639599 ACTN1P12814 892 aa17.17■□□□□ 0.34
TARDBP-231ENST00000639599 ASPRV1Q53RT3 343 aa17.17■□□□□ 0.34
TARDBP-231ENST00000639599 C16orf59Q7L2K0 433 aa17.17■□□□□ 0.34
TARDBP-231ENST00000639599 SMC5Q8IY18 1101 aa17.17■□□□□ 0.34
TARDBP-231ENST00000639599 RETREG2Q8NC44 543 aa17.17■□□□□ 0.34
TARDBP-231ENST00000639599 CLEC4DQ8WXI8 215 aa17.17■□□□□ 0.34
TARDBP-231ENST00000639599 KRT23Q9C075 422 aa17.17■□□□□ 0.34
TARDBP-231ENST00000639599 UBA5Q9GZZ9 404 aa17.17■□□□□ 0.34
TARDBP-231ENST00000639599 SLC4A7Q9Y6M7 1214 aa17.17■□□□□ 0.34
TARDBP-231ENST00000639599 TNKSO95271 1327 aa17.17■□□□□ 0.34
TARDBP-231ENST00000639599 ABCB11O95342 1321 aa17.17■□□□□ 0.34
TARDBP-231ENST00000639599 PFKMP08237 780 aa17.16■□□□□ 0.34
TARDBP-231ENST00000639599 PARP1P09874 1014 aaKnown RBP17.16■□□□□ 0.34
TARDBP-231ENST00000639599 SNHG28P0DPA3 235 aa17.16■□□□□ 0.34
TARDBP-231ENST00000639599 IGFBP4P22692 258 aa17.16■□□□□ 0.34
TARDBP-231ENST00000639599 PBX2P40425 430 aa17.16■□□□□ 0.34
TARDBP-231ENST00000639599 PURAQ00577 322 aaKnown RBP17.16■□□□□ 0.34
TARDBP-231ENST00000639599 NUCB1Q02818 461 aa17.16■□□□□ 0.34
TARDBP-231ENST00000639599 PLEKHM2Q8IWE5 1019 aa17.16■□□□□ 0.34
TARDBP-231ENST00000639599 IL27Q8NEV9 243 aa17.16■□□□□ 0.34
TARDBP-231ENST00000639599 ZSCAN10Q96SZ4 725 aaPredicted RBP17.16■□□□□ 0.34
TARDBP-231ENST00000639599 PRDM12Q9H4Q4 367 aa17.16■□□□□ 0.34
TARDBP-231ENST00000639599 CNNM2Q9H8M5 875 aa17.16■□□□□ 0.34
TARDBP-231ENST00000639599 TRMT13Q9NUP7 481 aaKnown RBP17.16■□□□□ 0.34
TARDBP-231ENST00000639599 UMODL1Q5DID0 1318 aa17.16■□□□□ 0.34
TARDBP-231ENST00000639599 B4E1Z4 1266 aa17.15■□□□□ 0.34
TARDBP-231ENST00000639599 TMEM63BQ5T3F8 832 aa17.15■□□□□ 0.34
TARDBP-231ENST00000639599 RASIP1Q5U651 963 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms