RNA–Protein interactions for RNA: ENST00000638163.1

LINC00598-216, long intergenic non-protein coding RNA 598, humanhuman

TSL 4 BASIC

Gene LINC00598, Length 528 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00598-216ENST00000638163 USH1GQ495M9 461 aa11.73□□□□□ -0.53
LINC00598-216ENST00000638163 KANK3Q6NY19 840 aa11.73□□□□□ -0.53
LINC00598-216ENST00000638163 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.73□□□□□ -0.53
LINC00598-216ENST00000638163 KCTD17Q8N5Z5 321 aa11.73□□□□□ -0.53
LINC00598-216ENST00000638163 TBCKQ8TEA7 893 aa11.73□□□□□ -0.53
LINC00598-216ENST00000638163 TIGD1Q96MW7 591 aa11.73□□□□□ -0.53
LINC00598-216ENST00000638163 MPHOSPH6Q99547 160 aaKnown RBP11.73□□□□□ -0.53
LINC00598-216ENST00000638163 ANO3Q9BYT9 981 aa11.73□□□□□ -0.53
LINC00598-216ENST00000638163 GDPD2Q9HCC8 539 aa11.73□□□□□ -0.53
LINC00598-216ENST00000638163 PCDHA7Q9UN72 937 aa11.73□□□□□ -0.53
LINC00598-216ENST00000638163 POLR2AP24928 1970 aaKnown RBP11.72□□□□□ -0.53
LINC00598-216ENST00000638163 ZNF536O15090 1300 aa11.72□□□□□ -0.53
LINC00598-216ENST00000638163 MEIS2O14770 477 aa11.72□□□□□ -0.53
LINC00598-216ENST00000638163 DTNBO60941 627 aa11.72□□□□□ -0.53
LINC00598-216ENST00000638163 STAM2O75886 525 aa11.72□□□□□ -0.53
LINC00598-216ENST00000638163 CIITAP33076 1130 aa11.72□□□□□ -0.53
LINC00598-216ENST00000638163 GCLCP48506 637 aaPredicted RBP11.72□□□□□ -0.53
LINC00598-216ENST00000638163 APLP1P51693 650 aa11.72□□□□□ -0.53
LINC00598-216ENST00000638163 CCNA1P78396 465 aa11.72□□□□□ -0.53
LINC00598-216ENST00000638163 CEBPZQ03701 1054 aaKnown RBP11.72□□□□□ -0.53
LINC00598-216ENST00000638163 INF2Q27J81 1249 aa11.72□□□□□ -0.53
LINC00598-216ENST00000638163 CCDC174Q6PII3 467 aa11.72□□□□□ -0.53
LINC00598-216ENST00000638163 DTHD1Q6ZMT9 781 aa11.72□□□□□ -0.53
LINC00598-216ENST00000638163 ANKRD23Q86SG2 305 aa11.72□□□□□ -0.53
LINC00598-216ENST00000638163 CCDC84Q86UT8 332 aaPredicted RBP11.72□□□□□ -0.53
LINC00598-216ENST00000638163 SLFN12Q8IYM2 578 aa11.72□□□□□ -0.53
LINC00598-216ENST00000638163 WNK4Q96J92 1243 aa11.72□□□□□ -0.53
LINC00598-216ENST00000638163 ACAD9Q9H845 621 aa11.72□□□□□ -0.53
LINC00598-216ENST00000638163 ZNF408Q9H9D4 720 aa11.72□□□□□ -0.53
LINC00598-216ENST00000638163 FBXO28Q9NVF7 368 aa11.72□□□□□ -0.53
LINC00598-216ENST00000638163 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.72□□□□□ -0.53
LINC00598-216ENST00000638163 BIN2Q9UBW5 565 aaPredicted RBP11.72□□□□□ -0.53
LINC00598-216ENST00000638163 PCDHB6Q9Y5E3 794 aa11.72□□□□□ -0.53
LINC00598-216ENST00000638163 MANSC4A6NHS7 340 aaPredicted RBP11.71□□□□□ -0.53
LINC00598-216ENST00000638163 SPDYE16A6NNV3 312 aaPredicted RBP11.71□□□□□ -0.53
LINC00598-216ENST00000638163 CCNT1O60563 726 aaKnown RBP11.71□□□□□ -0.53
LINC00598-216ENST00000638163 CAVIN2O95810 425 aa11.71□□□□□ -0.53
LINC00598-216ENST00000638163 OR52Z1P0C646 297 aa11.71□□□□□ -0.53
LINC00598-216ENST00000638163 STAT3P40763 770 aa11.71□□□□□ -0.53
LINC00598-216ENST00000638163 PTGDRQ13258 359 aa11.71□□□□□ -0.53
LINC00598-216ENST00000638163 LETM2Q2VYF4 491 aa11.71□□□□□ -0.53
LINC00598-216ENST00000638163 AXDND1Q5T1B0 1012 aaPredicted RBP11.71□□□□□ -0.53
LINC00598-216ENST00000638163 JAKMIP3Q5VZ66 844 aa11.71□□□□□ -0.53
LINC00598-216ENST00000638163 RESP18Q5W5W9 173 aa11.71□□□□□ -0.53
LINC00598-216ENST00000638163 GADL1Q6ZQY3 521 aa11.71□□□□□ -0.53
LINC00598-216ENST00000638163 NIPA1Q7RTP0 329 aa11.71□□□□□ -0.53
LINC00598-216ENST00000638163 RIOX2Q8IUF8 465 aa11.71□□□□□ -0.53
LINC00598-216ENST00000638163 CCAR1Q8IX12 1150 aaKnown RBP11.71□□□□□ -0.53
LINC00598-216ENST00000638163 REM2Q8IYK8 340 aaPredicted RBP11.71□□□□□ -0.53
LINC00598-216ENST00000638163 FSIP1Q8NA03 581 aa11.71□□□□□ -0.53
LINC00598-216ENST00000638163 SHCBP1Q8NEM2 672 aa11.71□□□□□ -0.53
LINC00598-216ENST00000638163 REPS2Q8NFH8 660 aa11.71□□□□□ -0.53
LINC00598-216ENST00000638163 GPT2Q8TD30 523 aa11.71□□□□□ -0.53
LINC00598-216ENST00000638163 CLMNQ96JQ2 1002 aa11.71□□□□□ -0.53
LINC00598-216ENST00000638163 FAM20AQ96MK3 541 aa11.71□□□□□ -0.53
LINC00598-216ENST00000638163 MBOAT7Q96N66 472 aa11.71□□□□□ -0.53
LINC00598-216ENST00000638163 NUP62CLQ9H1M0 184 aa11.71□□□□□ -0.53
LINC00598-216ENST00000638163 FBXO2Q9UK22 296 aaPredicted RBP11.71□□□□□ -0.53
LINC00598-216ENST00000638163 CEP350Q5VT06 3117 aa11.71□□□□□ -0.54
LINC00598-216ENST00000638163 FRMPD4Q14CM0 1322 aa11.7□□□□□ -0.54
LINC00598-216ENST00000638163 PASKQ96RG2 1323 aa11.7□□□□□ -0.54
LINC00598-216ENST00000638163 TRAF5O00463 557 aa11.7□□□□□ -0.54
LINC00598-216ENST00000638163 CFBP00751 764 aa11.7□□□□□ -0.54
LINC00598-216ENST00000638163 ALAS1P13196 640 aa11.7□□□□□ -0.54
LINC00598-216ENST00000638163 MCM7P33993 719 aa11.7□□□□□ -0.54
LINC00598-216ENST00000638163 ARHGAP4P98171 946 aa11.7□□□□□ -0.54
LINC00598-216ENST00000638163 SEMA3FQ13275 785 aa11.7□□□□□ -0.54
LINC00598-216ENST00000638163 PDIA5Q14554 519 aa11.7□□□□□ -0.54
LINC00598-216ENST00000638163 Q4G0T1 1027 aa11.7□□□□□ -0.54
LINC00598-216ENST00000638163 SNRNP48Q6IEG0 339 aaKnown RBP11.7□□□□□ -0.54
LINC00598-216ENST00000638163 CRYGNQ8WXF5 182 aa11.7□□□□□ -0.54
LINC00598-216ENST00000638163 CCDC102AQ96A19 550 aa11.7□□□□□ -0.54
LINC00598-216ENST00000638163 ATG4CQ96DT6 458 aa11.7□□□□□ -0.54
LINC00598-216ENST00000638163 PGBD1Q96JS3 809 aa11.7□□□□□ -0.54
LINC00598-216ENST00000638163 TRERF1Q96PN7 1200 aa11.7□□□□□ -0.54
LINC00598-216ENST00000638163 PARK7Q99497 189 aaKnown RBP11.7□□□□□ -0.54
LINC00598-216ENST00000638163 CUEDC2Q9H467 287 aa11.7□□□□□ -0.54
LINC00598-216ENST00000638163 MROH8Q9H579 483 aa11.7□□□□□ -0.54
LINC00598-216ENST00000638163 MAGEF1Q9HAY2 307 aa11.7□□□□□ -0.54
LINC00598-216ENST00000638163 ZNF214Q9UL59 606 aaPredicted RBP11.7□□□□□ -0.54
LINC00598-216ENST00000638163 A0A0G2JMZ2 1700 aa11.69□□□□□ -0.54
LINC00598-216ENST00000638163 TESPA1A2RU30 521 aaPredicted RBP11.69□□□□□ -0.54
LINC00598-216ENST00000638163 MAFGO15525 162 aa11.69□□□□□ -0.54
LINC00598-216ENST00000638163 MYL1P05976 194 aa11.69□□□□□ -0.54
LINC00598-216ENST00000638163 BCRP11274 1271 aa11.69□□□□□ -0.54
LINC00598-216ENST00000638163 SYKP43405 635 aa11.69□□□□□ -0.54
LINC00598-216ENST00000638163 FXR2P51116 673 aaKnown RBP eCLIP11.69□□□□□ -0.54
LINC00598-216ENST00000638163 HUNKP57058 714 aa11.69□□□□□ -0.54
LINC00598-216ENST00000638163 HERVK_113P62684 666 aa11.69□□□□□ -0.54
LINC00598-216ENST00000638163 ZNF174Q15697 407 aa11.69□□□□□ -0.54
LINC00598-216ENST00000638163 CALCRLQ16602 461 aa11.69□□□□□ -0.54
LINC00598-216ENST00000638163 EARS2Q5JPH6 523 aaKnown RBP11.69□□□□□ -0.54
LINC00598-216ENST00000638163 SPRYD7Q5W111 196 aa11.69□□□□□ -0.54
LINC00598-216ENST00000638163 CAVIN1Q6NZI2 390 aaKnown RBP11.69□□□□□ -0.54
LINC00598-216ENST00000638163 USP17L6PQ6QN14 398 aa11.69□□□□□ -0.54
LINC00598-216ENST00000638163 RNF207Q6ZRF8 634 aa11.69□□□□□ -0.54
LINC00598-216ENST00000638163 DNERQ8NFT8 737 aa11.69□□□□□ -0.54
LINC00598-216ENST00000638163 RASGRP4Q8TDF6 673 aa11.69□□□□□ -0.54
LINC00598-216ENST00000638163 CDHR1Q96JP9 859 aa11.69□□□□□ -0.54
LINC00598-216ENST00000638163 GTPBP4Q9BZE4 634 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms