RNA–Protein interactions for RNA: ENST00000637786.1

CHRNA7-231, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 1 (best)

Gene CHRNA7, Length 383 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-231ENST00000637786 IRF5Q13568 498 aa25.76■■□□□ 1.71
CHRNA7-231ENST00000637786 RNF207Q6ZRF8 634 aa25.76■■□□□ 1.71
CHRNA7-231ENST00000637786 INTS4Q96HW7 963 aaKnown RBP25.76■■□□□ 1.71
CHRNA7-231ENST00000637786 TRIM17Q9Y577 477 aa25.76■■□□□ 1.71
CHRNA7-231ENST00000637786 PIK3CDO00329 1044 aa25.75■■□□□ 1.71
CHRNA7-231ENST00000637786 XRCC5P13010 732 aaKnown RBP25.75■■□□□ 1.71
CHRNA7-231ENST00000637786 XBP1P17861 261 aa25.75■■□□□ 1.71
CHRNA7-231ENST00000637786 RPS6P62753 249 aaKnown RBP25.75■■□□□ 1.71
CHRNA7-231ENST00000637786 PRKCZQ05513 592 aa25.75■■□□□ 1.71
CHRNA7-231ENST00000637786 BAATQ14032 418 aaPredicted RBP25.75■■□□□ 1.71
CHRNA7-231ENST00000637786 CTU1Q7Z7A3 348 aaKnown RBP25.75■■□□□ 1.71
CHRNA7-231ENST00000637786 ZMYND12Q9H0C1 365 aa25.75■■□□□ 1.71
CHRNA7-231ENST00000637786 PSTPIP2Q9H939 334 aa25.75■■□□□ 1.71
CHRNA7-231ENST00000637786 DIS3Q9Y2L1 958 aaKnown RBP25.75■■□□□ 1.71
CHRNA7-231ENST00000637786 LCTP09848 1927 aa25.75■■□□□ 1.71
CHRNA7-231ENST00000637786 FLT3LGP49771 235 aa25.74■■□□□ 1.71
CHRNA7-231ENST00000637786 DPP9Q86TI2 863 aa25.74■■□□□ 1.71
CHRNA7-231ENST00000637786 FAM133AQ8N9E0 248 aa25.74■■□□□ 1.71
CHRNA7-231ENST00000637786 APBA2Q99767 749 aa25.74■■□□□ 1.71
CHRNA7-231ENST00000637786 ALG1Q9BT22 464 aa25.74■■□□□ 1.71
CHRNA7-231ENST00000637786 RIC8AQ9NPQ8 531 aa25.74■■□□□ 1.71
CHRNA7-231ENST00000637786 GABRQQ9UN88 632 aa25.74■■□□□ 1.71
CHRNA7-231ENST00000637786 KIF3AQ9Y496 699 aa25.74■■□□□ 1.71
CHRNA7-231ENST00000637786 POTEB2H3BUK9 544 aa25.73■■□□□ 1.71
CHRNA7-231ENST00000637786 GCOM1H8Y6P7 765 aaPredicted RBP25.73■■□□□ 1.71
CHRNA7-231ENST00000637786 COBLO75128 1261 aa25.73■■□□□ 1.71
CHRNA7-231ENST00000637786 CFBP00751 764 aa25.73■■□□□ 1.71
CHRNA7-231ENST00000637786 POLR2MP0CAP2 368 aa25.73■■□□□ 1.71
CHRNA7-231ENST00000637786 MRPL12P52815 198 aaKnown RBP25.73■■□□□ 1.71
CHRNA7-231ENST00000637786 ZNF792Q3KQV3 632 aa25.73■■□□□ 1.71
CHRNA7-231ENST00000637786 SLC30A10Q6XR72 485 aa25.73■■□□□ 1.71
CHRNA7-231ENST00000637786 TBC1D5Q92609 795 aa25.73■■□□□ 1.71
CHRNA7-231ENST00000637786 CUL5Q93034 780 aa25.73■■□□□ 1.71
CHRNA7-231ENST00000637786 AIFM3Q96NN9 605 aa25.73■■□□□ 1.71
CHRNA7-231ENST00000637786 VPS54Q9P1Q0 977 aa25.73■■□□□ 1.71
CHRNA7-231ENST00000637786 SMCO2A6NFE2 343 aa25.72■■□□□ 1.71
CHRNA7-231ENST00000637786 PGK2P07205 417 aa25.72■■□□□ 1.71
CHRNA7-231ENST00000637786 GNA11P29992 359 aa25.72■■□□□ 1.71
CHRNA7-231ENST00000637786 ADCY7P51828 1080 aa25.72■■□□□ 1.71
CHRNA7-231ENST00000637786 GALNT17Q6IS24 598 aa25.72■■□□□ 1.71
CHRNA7-231ENST00000637786 ZNF467Q7Z7K2 595 aaPredicted RBP25.72■■□□□ 1.71
CHRNA7-231ENST00000637786 SYTL5Q8TDW5 730 aaPredicted RBP25.72■■□□□ 1.71
CHRNA7-231ENST00000637786 C6orf50Q9HD87 102 aa25.72■■□□□ 1.71
CHRNA7-231ENST00000637786 LOC102724159A0A0B4J2E5 919 aa25.71■■□□□ 1.71
CHRNA7-231ENST00000637786 MEIS2O14770 477 aa25.71■■□□□ 1.71
CHRNA7-231ENST00000637786 DTNBO60941 627 aa25.71■■□□□ 1.71
CHRNA7-231ENST00000637786 PWP2Q15269 919 aaKnown RBP25.71■■□□□ 1.71
CHRNA7-231ENST00000637786 PKN2Q16513 984 aaKnown RBP25.71■■□□□ 1.71
CHRNA7-231ENST00000637786 TRMT44Q8IYL2 757 aaKnown RBP25.71■■□□□ 1.71
CHRNA7-231ENST00000637786 FAM184AQ8NB25 1140 aa25.71■■□□□ 1.71
CHRNA7-231ENST00000637786 BICD2Q8TD16 824 aa25.71■■□□□ 1.71
CHRNA7-231ENST00000637786 SHISA4Q96DD7 197 aa25.71■■□□□ 1.71
CHRNA7-231ENST00000637786 SMC3Q9UQE7 1217 aa25.71■■□□□ 1.71
CHRNA7-231ENST00000637786 PTPN22Q9Y2R2 807 aa25.71■■□□□ 1.71
CHRNA7-231ENST00000637786 CALML3P27482 149 aa25.7■■□□□ 1.7
CHRNA7-231ENST00000637786 BECN1Q14457 450 aa25.7■■□□□ 1.7
CHRNA7-231ENST00000637786 DNERQ8NFT8 737 aa25.7■■□□□ 1.7
CHRNA7-231ENST00000637786 RAET1EQ8TD07 263 aa25.7■■□□□ 1.7
CHRNA7-231ENST00000637786 ADD3Q9UEY8 706 aaKnown RBP25.7■■□□□ 1.7
CHRNA7-231ENST00000637786 CYP2B6P20813 491 aa25.69■■□□□ 1.7
CHRNA7-231ENST00000637786 NLRP5P59047 1200 aa25.69■■□□□ 1.7
CHRNA7-231ENST00000637786 CNTN2Q02246 1040 aa25.69■■□□□ 1.7
CHRNA7-231ENST00000637786 OLFML2BQ68BL8 750 aa25.69■■□□□ 1.7
CHRNA7-231ENST00000637786 MCTP2Q6DN12 878 aa25.69■■□□□ 1.7
CHRNA7-231ENST00000637786 MSL3Q8N5Y2 521 aaKnown RBP25.69■■□□□ 1.7
CHRNA7-231ENST00000637786 DAGLBQ8NCG7 672 aa25.69■■□□□ 1.7
CHRNA7-231ENST00000637786 NPLOC4Q8TAT6 608 aa25.69■■□□□ 1.7
CHRNA7-231ENST00000637786 PXYLP1Q8TE99 480 aa25.69■■□□□ 1.7
CHRNA7-231ENST00000637786 MAML3Q96JK9 1138 aa25.69■■□□□ 1.7
CHRNA7-231ENST00000637786 FGD4Q96M96 766 aa25.69■■□□□ 1.7
CHRNA7-231ENST00000637786 PHF20Q9BVI0 1012 aa25.69■■□□□ 1.7
CHRNA7-231ENST00000637786 COL20A1Q9P218 1284 aa25.69■■□□□ 1.7
CHRNA7-231ENST00000637786 GJB2P29033 226 aa25.68■■□□□ 1.7
CHRNA7-231ENST00000637786 HOXA13P31271 388 aaPredicted RBP25.68■■□□□ 1.7
CHRNA7-231ENST00000637786 TRIM29Q14134 588 aa25.68■■□□□ 1.7
CHRNA7-231ENST00000637786 USP17L6PQ6QN14 398 aa25.68■■□□□ 1.7
CHRNA7-231ENST00000637786 SOWAHBA6NEL2 793 aa25.67■■□□□ 1.7
CHRNA7-231ENST00000637786 FOSP01100 380 aaPredicted RBP25.67■■□□□ 1.7
CHRNA7-231ENST00000637786 IGHA2P01877 340 aa25.67■■□□□ 1.7
CHRNA7-231ENST00000637786 CLK2P49760 499 aaKnown RBP25.67■■□□□ 1.7
CHRNA7-231ENST00000637786 C8orf76Q96K31 380 aa25.67■■□□□ 1.7
CHRNA7-231ENST00000637786 PCDHA4Q9UN74 947 aa25.67■■□□□ 1.7
CHRNA7-231ENST00000637786 B4DLN1 442 aa25.66■■□□□ 1.7
CHRNA7-231ENST00000637786 AP3B2Q13367 1082 aa25.66■■□□□ 1.7
CHRNA7-231ENST00000637786 NPY5RQ15761 445 aa25.66■■□□□ 1.7
CHRNA7-231ENST00000637786 FBXO46Q6PJ61 603 aaPredicted RBP25.66■■□□□ 1.7
CHRNA7-231ENST00000637786 MAMDC4Q6UXC1 1216 aa25.66■■□□□ 1.7
CHRNA7-231ENST00000637786 REXO1Q8N1G1 1221 aaKnown RBP25.66■■□□□ 1.7
CHRNA7-231ENST00000637786 SLAIN1Q8ND83 568 aa25.66■■□□□ 1.7
CHRNA7-231ENST00000637786 NSUN6Q8TEA1 469 aaKnown RBP25.66■■□□□ 1.7
CHRNA7-231ENST00000637786 MPHOSPH6Q99547 160 aaKnown RBP25.66■■□□□ 1.7
CHRNA7-231ENST00000637786 PTCH2Q9Y6C5 1203 aa25.66■■□□□ 1.7
CHRNA7-231ENST00000637786 ASTN1O14525 1302 aa25.65■■□□□ 1.7
CHRNA7-231ENST00000637786 FRMPD4Q14CM0 1322 aa25.65■■□□□ 1.7
CHRNA7-231ENST00000637786 ASB14A6NK59 587 aa25.65■■□□□ 1.7
CHRNA7-231ENST00000637786 ADCY3O60266 1144 aa25.65■■□□□ 1.7
CHRNA7-231ENST00000637786 ALDH5A1P51649 535 aaPredicted RBP25.65■■□□□ 1.7
CHRNA7-231ENST00000637786 UBE2SQ16763 222 aa25.65■■□□□ 1.7
CHRNA7-231ENST00000637786 KRT40Q6A162 431 aa25.65■■□□□ 1.7
CHRNA7-231ENST00000637786 FCHSD1Q86WN1 690 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms