RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 TRIM17Q9Y577 477 aa18.42■□□□□ 0.54
CLN6-216ENST00000636876 TNRC18O15417 2968 aaPredicted RBP18.41■□□□□ 0.54
CLN6-216ENST00000636876 COBLO75128 1261 aa18.41■□□□□ 0.54
CLN6-216ENST00000636876 CFBP00751 764 aa18.41■□□□□ 0.54
CLN6-216ENST00000636876 FLT3LGP49771 235 aa18.41■□□□□ 0.54
CLN6-216ENST00000636876 RGS19P49795 217 aa18.41■□□□□ 0.54
CLN6-216ENST00000636876 HSD17B4P51659 736 aa18.41■□□□□ 0.54
CLN6-216ENST00000636876 PRMT2P55345 433 aa18.41■□□□□ 0.54
CLN6-216ENST00000636876 RPS6P62753 249 aaKnown RBP18.41■□□□□ 0.54
CLN6-216ENST00000636876 SLC30A10Q6XR72 485 aa18.41■□□□□ 0.54
CLN6-216ENST00000636876 RNF207Q6ZRF8 634 aa18.41■□□□□ 0.54
CLN6-216ENST00000636876 FAM177A1Q8N128 213 aaPredicted RBP18.41■□□□□ 0.54
CLN6-216ENST00000636876 SAMD3Q8N6K7 520 aa18.41■□□□□ 0.54
CLN6-216ENST00000636876 CCDC148Q8NFR7 591 aa18.41■□□□□ 0.54
CLN6-216ENST00000636876 SHISA4Q96DD7 197 aa18.41■□□□□ 0.54
CLN6-216ENST00000636876 ALG1Q9BT22 464 aa18.41■□□□□ 0.54
CLN6-216ENST00000636876 PSTPIP2Q9H939 334 aa18.41■□□□□ 0.54
CLN6-216ENST00000636876 VPS54Q9P1Q0 977 aa18.41■□□□□ 0.54
CLN6-216ENST00000636876 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.41■□□□□ 0.54
CLN6-216ENST00000636876 HTTP42858 3142 aa18.41■□□□□ 0.54
CLN6-216ENST00000636876 ESYT2A0FGR8 921 aa18.4■□□□□ 0.54
CLN6-216ENST00000636876 POTEB2H3BUK9 544 aa18.4■□□□□ 0.54
CLN6-216ENST00000636876 GCOM1H8Y6P7 765 aaPredicted RBP18.4■□□□□ 0.54
CLN6-216ENST00000636876 PGK2P07205 417 aa18.4■□□□□ 0.54
CLN6-216ENST00000636876 HOXC6P09630 235 aa18.4■□□□□ 0.54
CLN6-216ENST00000636876 POLR2MP0CAP2 368 aa18.4■□□□□ 0.54
CLN6-216ENST00000636876 RGS2P41220 211 aa18.4■□□□□ 0.54
CLN6-216ENST00000636876 ADCY7P51828 1080 aa18.4■□□□□ 0.54
CLN6-216ENST00000636876 MLLT1Q03111 559 aaPredicted RBP18.4■□□□□ 0.54
CLN6-216ENST00000636876 CTU1Q7Z7A3 348 aaKnown RBP18.4■□□□□ 0.54
CLN6-216ENST00000636876 DPP9Q86TI2 863 aa18.4■□□□□ 0.54
CLN6-216ENST00000636876 FAM133AQ8N9E0 248 aa18.4■□□□□ 0.54
CLN6-216ENST00000636876 APBA2Q99767 749 aa18.4■□□□□ 0.54
CLN6-216ENST00000636876 MAP3K20Q9NYL2 800 aaKnown RBP18.4■□□□□ 0.54
CLN6-216ENST00000636876 SMCO2A6NFE2 343 aa18.39■□□□□ 0.53
CLN6-216ENST00000636876 CALML3P27482 149 aa18.39■□□□□ 0.53
CLN6-216ENST00000636876 CNTN2Q02246 1040 aa18.39■□□□□ 0.53
CLN6-216ENST00000636876 IRF5Q13568 498 aa18.39■□□□□ 0.53
CLN6-216ENST00000636876 ZNF792Q3KQV3 632 aa18.39■□□□□ 0.53
CLN6-216ENST00000636876 TEX2Q8IWB9 1127 aa18.39■□□□□ 0.53
CLN6-216ENST00000636876 SYTL5Q8TDW5 730 aaPredicted RBP18.39■□□□□ 0.53
CLN6-216ENST00000636876 CUL5Q93034 780 aa18.39■□□□□ 0.53
CLN6-216ENST00000636876 INTS4Q96HW7 963 aaKnown RBP18.39■□□□□ 0.53
CLN6-216ENST00000636876 ZMYND12Q9H0C1 365 aa18.39■□□□□ 0.53
CLN6-216ENST00000636876 GLT8D2Q9H1C3 349 aa18.39■□□□□ 0.53
CLN6-216ENST00000636876 RIC8AQ9NPQ8 531 aa18.39■□□□□ 0.53
CLN6-216ENST00000636876 SLC5A4Q9NY91 659 aa18.39■□□□□ 0.53
CLN6-216ENST00000636876 SMC3Q9UQE7 1217 aa18.39■□□□□ 0.53
CLN6-216ENST00000636876 PIK3CDO00329 1044 aa18.38■□□□□ 0.53
CLN6-216ENST00000636876 MEIS2O14770 477 aa18.38■□□□□ 0.53
CLN6-216ENST00000636876 XRCC5P13010 732 aaKnown RBP18.38■□□□□ 0.53
CLN6-216ENST00000636876 XBP1P17861 261 aa18.38■□□□□ 0.53
CLN6-216ENST00000636876 CYP2B6P20813 491 aa18.38■□□□□ 0.53
CLN6-216ENST00000636876 HOXA13P31271 388 aaPredicted RBP18.38■□□□□ 0.53
CLN6-216ENST00000636876 MRPL12P52815 198 aaKnown RBP18.38■□□□□ 0.53
CLN6-216ENST00000636876 FAM184AQ8NB25 1140 aa18.38■□□□□ 0.53
CLN6-216ENST00000636876 NPLOC4Q8TAT6 608 aa18.38■□□□□ 0.53
CLN6-216ENST00000636876 FGD4Q96M96 766 aa18.38■□□□□ 0.53
CLN6-216ENST00000636876 C6orf50Q9HD87 102 aa18.38■□□□□ 0.53
CLN6-216ENST00000636876 COL20A1Q9P218 1284 aa18.38■□□□□ 0.53
CLN6-216ENST00000636876 DIS3Q9Y2L1 958 aaKnown RBP18.38■□□□□ 0.53
CLN6-216ENST00000636876 LCTP09848 1927 aa18.38■□□□□ 0.53
CLN6-216ENST00000636876 PLXNA1Q9UIW2 1896 aa18.37■□□□□ 0.53
CLN6-216ENST00000636876 SOWAHBA6NEL2 793 aa18.37■□□□□ 0.53
CLN6-216ENST00000636876 GJB2P29033 226 aa18.37■□□□□ 0.53
CLN6-216ENST00000636876 NLRP5P59047 1200 aa18.37■□□□□ 0.53
CLN6-216ENST00000636876 UBE2SQ16763 222 aa18.37■□□□□ 0.53
CLN6-216ENST00000636876 USP17L6PQ6QN14 398 aa18.37■□□□□ 0.53
CLN6-216ENST00000636876 RAET1EQ8TD07 263 aa18.37■□□□□ 0.53
CLN6-216ENST00000636876 PURBQ96QR8 312 aaKnown RBP18.37■□□□□ 0.53
CLN6-216ENST00000636876 GJB4Q9NTQ9 266 aa18.37■□□□□ 0.53
CLN6-216ENST00000636876 PTPN22Q9Y2R2 807 aa18.37■□□□□ 0.53
CLN6-216ENST00000636876 KIF3AQ9Y496 699 aa18.37■□□□□ 0.53
CLN6-216ENST00000636876 ASTN1O14525 1302 aa18.36■□□□□ 0.53
CLN6-216ENST00000636876 GNA11P29992 359 aa18.36■□□□□ 0.53
CLN6-216ENST00000636876 FOSBP53539 338 aa18.36■□□□□ 0.53
CLN6-216ENST00000636876 BECN1Q14457 450 aa18.36■□□□□ 0.53
CLN6-216ENST00000636876 ZNF467Q7Z7K2 595 aaPredicted RBP18.36■□□□□ 0.53
CLN6-216ENST00000636876 MAML3Q96JK9 1138 aa18.36■□□□□ 0.53
CLN6-216ENST00000636876 PHF20Q9BVI0 1012 aa18.36■□□□□ 0.53
CLN6-216ENST00000636876 KCNJ14Q9UNX9 436 aa18.36■□□□□ 0.53
CLN6-216ENST00000636876 PTCH2Q9Y6C5 1203 aa18.36■□□□□ 0.53
CLN6-216ENST00000636876 ADCY3O60266 1144 aa18.35■□□□□ 0.53
CLN6-216ENST00000636876 TRIM29Q14134 588 aa18.35■□□□□ 0.53
CLN6-216ENST00000636876 NPY5RQ15761 445 aa18.35■□□□□ 0.53
CLN6-216ENST00000636876 PKN2Q16513 984 aaKnown RBP18.35■□□□□ 0.53
CLN6-216ENST00000636876 CCL14Q16627 93 aa18.35■□□□□ 0.53
CLN6-216ENST00000636876 OLFML2BQ68BL8 750 aa18.35■□□□□ 0.53
CLN6-216ENST00000636876 GALNT17Q6IS24 598 aa18.35■□□□□ 0.53
CLN6-216ENST00000636876 FCHSD1Q86WN1 690 aa18.35■□□□□ 0.53
CLN6-216ENST00000636876 TRMT44Q8IYL2 757 aaKnown RBP18.35■□□□□ 0.53
CLN6-216ENST00000636876 DAGLBQ8NCG7 672 aa18.35■□□□□ 0.53
CLN6-216ENST00000636876 DNERQ8NFT8 737 aa18.35■□□□□ 0.53
CLN6-216ENST00000636876 BICD2Q8TD16 824 aa18.35■□□□□ 0.53
CLN6-216ENST00000636876 C8orf76Q96K31 380 aa18.35■□□□□ 0.53
CLN6-216ENST00000636876 TAAR1Q96RJ0 339 aa18.35■□□□□ 0.53
CLN6-216ENST00000636876 ADD3Q9UEY8 706 aaKnown RBP18.35■□□□□ 0.53
CLN6-216ENST00000636876 PCDHA4Q9UN74 947 aa18.35■□□□□ 0.53
CLN6-216ENST00000636876 ADAMTS3O15072 1205 aa18.34■□□□□ 0.53
CLN6-216ENST00000636876 CLK2P49760 499 aaKnown RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms