RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 ANKS1AQ92625 1134 aa20.94■□□□□ 0.94
PNKP-225ENST00000636214 PURBQ96QR8 312 aaKnown RBP20.94■□□□□ 0.94
PNKP-225ENST00000636214 PDGFCQ9NRA1 345 aa20.94■□□□□ 0.94
PNKP-225ENST00000636214 Q9Y3F1 56 aa20.94■□□□□ 0.94
PNKP-225ENST00000636214 DDX49Q9Y6V7 483 aaKnown RBP20.94■□□□□ 0.94
PNKP-225ENST00000636214 U3KPZ7 1027 aaPredicted RBP20.94■□□□□ 0.94
PNKP-225ENST00000636214 ASTN1O14525 1302 aa20.94■□□□□ 0.94
PNKP-225ENST00000636214 LCTP09848 1927 aa20.94■□□□□ 0.94
PNKP-225ENST00000636214 RPS6P62753 249 aaKnown RBP20.93■□□□□ 0.94
PNKP-225ENST00000636214 IRX5P78411 483 aaPredicted RBP20.93■□□□□ 0.94
PNKP-225ENST00000636214 FAAP100Q0VG06 881 aa20.93■□□□□ 0.94
PNKP-225ENST00000636214 BRDTQ58F21 947 aaPredicted RBP20.93■□□□□ 0.94
PNKP-225ENST00000636214 CLEC4DQ8WXI8 215 aa20.93■□□□□ 0.94
PNKP-225ENST00000636214 ABCB11O95342 1321 aa20.93■□□□□ 0.94
PNKP-225ENST00000636214 ERICH2A1L162 156 aa20.92■□□□□ 0.94
PNKP-225ENST00000636214 NKX3-2P78367 333 aa20.92■□□□□ 0.94
PNKP-225ENST00000636214 C9orf50Q5SZB4 431 aa20.92■□□□□ 0.94
PNKP-225ENST00000636214 ZNF697Q5TEC3 545 aa20.92■□□□□ 0.94
PNKP-225ENST00000636214 TAPT1Q6NXT6 567 aa20.92■□□□□ 0.94
PNKP-225ENST00000636214 CXCL17Q6UXB2 119 aa20.92■□□□□ 0.94
PNKP-225ENST00000636214 RALYLQ86SE5 291 aaKnown RBP20.92■□□□□ 0.94
PNKP-225ENST00000636214 ADGRF4Q8IZF3 695 aa20.92■□□□□ 0.94
PNKP-225ENST00000636214 DNERQ8NFT8 737 aa20.92■□□□□ 0.94
PNKP-225ENST00000636214 RNPC3Q96LT9 517 aaKnown RBP20.92■□□□□ 0.94
PNKP-225ENST00000636214 SEZ6LQ9BYH1 1024 aa20.92■□□□□ 0.94
PNKP-225ENST00000636214 WDR11Q9BZH6 1224 aa20.92■□□□□ 0.94
PNKP-225ENST00000636214 CPVLQ9H3G5 476 aa20.92■□□□□ 0.94
PNKP-225ENST00000636214 TIMP1P01033 207 aa20.91■□□□□ 0.94
PNKP-225ENST00000636214 CHMLP26374 656 aa20.91■□□□□ 0.94
PNKP-225ENST00000636214 SART3Q15020 963 aaKnown RBP20.91■□□□□ 0.94
PNKP-225ENST00000636214 PPP2R5BQ15173 497 aa20.91■□□□□ 0.94
PNKP-225ENST00000636214 DUSP28Q4G0W2 176 aa20.91■□□□□ 0.94
PNKP-225ENST00000636214 MCF2L2Q86YR7 1114 aa20.91■□□□□ 0.94
PNKP-225ENST00000636214 IL25Q9H293 177 aa20.91■□□□□ 0.94
PNKP-225ENST00000636214 VAT1LQ9HCJ6 419 aa20.91■□□□□ 0.94
PNKP-225ENST00000636214 LAMA2P24043 3122 aaKnown RBP20.91■□□□□ 0.94
PNKP-225ENST00000636214 CTAGE5O15320 804 aa20.9■□□□□ 0.94
PNKP-225ENST00000636214 CPT1AP50416 773 aa20.9■□□□□ 0.94
PNKP-225ENST00000636214 PPIGQ13427 754 aaKnown RBP eCLIP20.9■□□□□ 0.945e-8■■■■□ 25.8
PNKP-225ENST00000636214 ITGA7Q13683 1181 aa20.9■□□□□ 0.94
PNKP-225ENST00000636214 FBXO11Q86XK2 927 aa20.9■□□□□ 0.94
PNKP-225ENST00000636214 RGS22Q8NE09 1264 aa20.9■□□□□ 0.94
PNKP-225ENST00000636214 MAF1Q9H063 256 aa20.9■□□□□ 0.94
PNKP-225ENST00000636214 GPHNQ9NQX3 736 aaPredicted RBP20.9■□□□□ 0.94
PNKP-225ENST00000636214 MRPL11Q9Y3B7 192 aaKnown RBP20.9■□□□□ 0.94
PNKP-225ENST00000636214 NKRFO15226 690 aaKnown RBP eCLIP20.89■□□□□ 0.93
PNKP-225ENST00000636214 ITGB8P26012 769 aa20.89■□□□□ 0.93
PNKP-225ENST00000636214 CDK7P50613 346 aa20.89■□□□□ 0.93
PNKP-225ENST00000636214 FAM109BQ6ICB4 259 aaPredicted RBP20.89■□□□□ 0.93
PNKP-225ENST00000636214 TMEM199Q8N511 208 aa20.89■□□□□ 0.93
PNKP-225ENST00000636214 OR6J1Q8NGC5 347 aa20.89■□□□□ 0.93
PNKP-225ENST00000636214 SCFD2Q8WU76 684 aa20.89■□□□□ 0.93
PNKP-225ENST00000636214 POLR3EQ9NVU0 708 aa20.89■□□□□ 0.93
PNKP-225ENST00000636214 TBX21Q9UL17 535 aa20.89■□□□□ 0.93
PNKP-225ENST00000636214 IFIT3O14879 490 aaKnown RBP20.88■□□□□ 0.93
PNKP-225ENST00000636214 QRICH1Q2TAL8 776 aa20.88■□□□□ 0.93
PNKP-225ENST00000636214 MFSD5Q6N075 450 aa20.88■□□□□ 0.93
PNKP-225ENST00000636214 FAM126BQ8IXS8 530 aa20.88■□□□□ 0.93
PNKP-225ENST00000636214 NCOA7Q8NI08 942 aa20.88■□□□□ 0.93
PNKP-225ENST00000636214 PPP1R12CQ9BZL4 782 aa20.88■□□□□ 0.93
PNKP-225ENST00000636214 MTMR10Q9NXD2 777 aa20.88■□□□□ 0.93
PNKP-225ENST00000636214 MYL3P08590 195 aa20.87■□□□□ 0.93
PNKP-225ENST00000636214 CYP21A2P08686 494 aa20.87■□□□□ 0.93
PNKP-225ENST00000636214 PTH1RQ03431 593 aa20.87■□□□□ 0.93
PNKP-225ENST00000636214 TTLL4Q14679 1199 aa20.87■□□□□ 0.93
PNKP-225ENST00000636214 NSUN6Q8TEA1 469 aaKnown RBP20.87■□□□□ 0.93
PNKP-225ENST00000636214 STXBP5LQ9Y2K9 1186 aa20.87■□□□□ 0.93
PNKP-225ENST00000636214 KLRF2D3W0D1 207 aa20.86■□□□□ 0.93
PNKP-225ENST00000636214 SGSM2O43147 1006 aa20.86■□□□□ 0.93
PNKP-225ENST00000636214 EDNRBP24530 442 aa20.86■□□□□ 0.93
PNKP-225ENST00000636214 SMAD3P84022 425 aaKnown RBP20.86■□□□□ 0.93
PNKP-225ENST00000636214 TRAF1Q13077 416 aa20.86■□□□□ 0.93
PNKP-225ENST00000636214 WTAPQ15007 396 aa20.86■□□□□ 0.93
PNKP-225ENST00000636214 CYB5R4Q7L1T6 521 aa20.86■□□□□ 0.93
PNKP-225ENST00000636214 SLC17A8Q8NDX2 589 aa20.86■□□□□ 0.93
PNKP-225ENST00000636214 FAM161BQ96MY7 647 aa20.86■□□□□ 0.93
PNKP-225ENST00000636214 AMNQ9BXJ7 453 aa20.86■□□□□ 0.93
PNKP-225ENST00000636214 JMJD4Q9H9V9 463 aa20.86■□□□□ 0.93
PNKP-225ENST00000636214 RBM47A0AV96 593 aaKnown RBP20.85■□□□□ 0.93
PNKP-225ENST00000636214 TXNP10599 105 aaKnown RBP20.85■□□□□ 0.93
PNKP-225ENST00000636214 PTGS1P23219 599 aa20.85■□□□□ 0.93
PNKP-225ENST00000636214 SEC23AQ15436 765 aa20.85■□□□□ 0.93
PNKP-225ENST00000636214 ARHGEF16Q5VV41 709 aa20.85■□□□□ 0.93
PNKP-225ENST00000636214 HIPK3Q9H422 1215 aa20.85■□□□□ 0.93
PNKP-225ENST00000636214 CFBP00751 764 aa20.84■□□□□ 0.93
PNKP-225ENST00000636214 EPHB4P54760 987 aa20.84■□□□□ 0.93
PNKP-225ENST00000636214 STAG2Q8N3U4 1231 aa20.84■□□□□ 0.93
PNKP-225ENST00000636214 SLC43A3Q8NBI5 491 aa20.84■□□□□ 0.93
PNKP-225ENST00000636214 SYTL5Q8TDW5 730 aaPredicted RBP20.84■□□□□ 0.93
PNKP-225ENST00000636214 RMDN3Q96TC7 470 aa20.84■□□□□ 0.93
PNKP-225ENST00000636214 COL6A3P12111 3177 aa20.83■□□□□ 0.93
PNKP-225ENST00000636214 E7EWF7 191 aa20.83■□□□□ 0.93
PNKP-225ENST00000636214 ZBTB5O15062 677 aa20.83■□□□□ 0.93
PNKP-225ENST00000636214 KPNA6O60684 536 aa20.83■□□□□ 0.93
PNKP-225ENST00000636214 CD4P01730 458 aa20.83■□□□□ 0.93
PNKP-225ENST00000636214 PSMC6P62333 389 aa20.83■□□□□ 0.93
PNKP-225ENST00000636214 STXBP2Q15833 593 aa20.83■□□□□ 0.93
PNKP-225ENST00000636214 TMEM63BQ5T3F8 832 aa20.83■□□□□ 0.93
PNKP-225ENST00000636214 PSRC1Q6PGN9 363 aaPredicted RBP20.83■□□□□ 0.93
PNKP-225ENST00000636214 CATIPQ7Z7H3 387 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms