RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 DKC1O60832 514 aaKnown RBP eCLIP12.74□□□□□ -0.37
COL11A1-211ENST00000635193 FAM26FQ5R3K3 315 aa12.74□□□□□ -0.37
COL11A1-211ENST00000635193 TBC1D1Q86TI0 1168 aaPredicted RBP12.74□□□□□ -0.37
COL11A1-211ENST00000635193 CENPKQ9BS16 269 aa12.74□□□□□ -0.37
COL11A1-211ENST00000635193 PCDHA12Q9UN75 941 aa12.74□□□□□ -0.37
COL11A1-211ENST00000635193 SLFN14P0C7P3 912 aa12.74□□□□□ -0.37
COL11A1-211ENST00000635193 ZNF658Q5TYW1 1059 aaPredicted RBP12.74□□□□□ -0.37
COL11A1-211ENST00000635193 RSAD2Q8WXG1 361 aa12.74□□□□□ -0.37
COL11A1-211ENST00000635193 RBM17Q96I25 401 aaKnown RBP12.74□□□□□ -0.37
COL11A1-211ENST00000635193 METTL14Q9HCE5 456 aaKnown RBP12.74□□□□□ -0.37
COL11A1-211ENST00000635193 ATP7AQ04656 1500 aa12.74□□□□□ -0.37
COL11A1-211ENST00000635193 ATF2P15336 505 aa12.74□□□□□ -0.37
COL11A1-211ENST00000635193 KSR1Q8IVT5 923 aa12.74□□□□□ -0.37
COL11A1-211ENST00000635193 PNMA1Q8ND90 353 aa12.74□□□□□ -0.37
COL11A1-211ENST00000635193 ARMC2Q8NEN0 867 aa12.74□□□□□ -0.37
COL11A1-211ENST00000635193 NLRP7Q8WX94 980 aa12.74□□□□□ -0.37
COL11A1-211ENST00000635193 RAB20Q9NX57 234 aa12.74□□□□□ -0.37
COL11A1-211ENST00000635193 BZW2Q9Y6E2 419 aaKnown RBP12.74□□□□□ -0.37
COL11A1-211ENST00000635193 SATB1Q01826 763 aa12.74□□□□□ -0.37
COL11A1-211ENST00000635193 UBE3CQ15386 1083 aa12.74□□□□□ -0.37
COL11A1-211ENST00000635193 FNBP4Q8N3X1 1017 aaPredicted RBP12.74□□□□□ -0.37
COL11A1-211ENST00000635193 SART1O43290 800 aaKnown RBP12.73□□□□□ -0.37
COL11A1-211ENST00000635193 DAPK3O43293 454 aa12.73□□□□□ -0.37
COL11A1-211ENST00000635193 TRIM37O94972 964 aa12.73□□□□□ -0.37
COL11A1-211ENST00000635193 NDUFA10O95299 355 aa12.73□□□□□ -0.37
COL11A1-211ENST00000635193 ESRRGP62508 458 aa12.73□□□□□ -0.37
COL11A1-211ENST00000635193 CAPN12Q6ZSI9 719 aa12.73□□□□□ -0.37
COL11A1-211ENST00000635193 DNAJC10Q8IXB1 793 aa12.73□□□□□ -0.37
COL11A1-211ENST00000635193 P2RX5Q93086 422 aa12.73□□□□□ -0.37
COL11A1-211ENST00000635193 CUEDC2Q9H467 287 aa12.73□□□□□ -0.37
COL11A1-211ENST00000635193 RNF14Q9UBS8 474 aa12.73□□□□□ -0.37
COL11A1-211ENST00000635193 MAST3O60307 1309 aa12.73□□□□□ -0.37
COL11A1-211ENST00000635193 PLEKHG3A1L390 1219 aa12.73□□□□□ -0.37
COL11A1-211ENST00000635193 HMGB1P1B2RPK0 211 aaPredicted RBP12.73□□□□□ -0.37
COL11A1-211ENST00000635193 M0R2C6 588 aa12.73□□□□□ -0.37
COL11A1-211ENST00000635193 ZBTB22O15209 634 aa12.73□□□□□ -0.37
COL11A1-211ENST00000635193 CD19P15391 556 aa12.73□□□□□ -0.37
COL11A1-211ENST00000635193 CXCR5P32302 372 aa12.73□□□□□ -0.37
COL11A1-211ENST00000635193 NECTIN1Q15223 517 aa12.73□□□□□ -0.37
COL11A1-211ENST00000635193 SH3GL3Q99963 347 aa12.73□□□□□ -0.37
COL11A1-211ENST00000635193 RWDD2AQ9UIY3 292 aa12.73□□□□□ -0.37
COL11A1-211ENST00000635193 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.73□□□□□ -0.37
COL11A1-211ENST00000635193 MOCS3O95396 460 aa12.73□□□□□ -0.37
COL11A1-211ENST00000635193 TRAPPC10P48553 1259 aa12.73□□□□□ -0.37
COL11A1-211ENST00000635193 EXOC3L4Q17RC7 722 aa12.73□□□□□ -0.37
COL11A1-211ENST00000635193 BBOF1Q8ND07 529 aa12.73□□□□□ -0.37
COL11A1-211ENST00000635193 RNF26Q9BY78 433 aaPredicted RBP12.73□□□□□ -0.37
COL11A1-211ENST00000635193 SLC8A3P57103 927 aa12.73□□□□□ -0.37
COL11A1-211ENST00000635193 DYNC1I2Q13409 638 aaKnown RBP12.73□□□□□ -0.37
COL11A1-211ENST00000635193 PPP2R5DQ14738 602 aa12.73□□□□□ -0.37
COL11A1-211ENST00000635193 SEPT2Q15019 361 aa12.73□□□□□ -0.37
COL11A1-211ENST00000635193 PLA2G4DQ86XP0 818 aa12.73□□□□□ -0.37
COL11A1-211ENST00000635193 ST13P4Q8IZP2 240 aaPredicted RBP12.73□□□□□ -0.37
COL11A1-211ENST00000635193 SCINQ9Y6U3 715 aa12.73□□□□□ -0.37
COL11A1-211ENST00000635193 CFBP00751 764 aa12.72□□□□□ -0.37
COL11A1-211ENST00000635193 NHEJ1Q9H9Q4 299 aaPredicted RBP12.72□□□□□ -0.37
COL11A1-211ENST00000635193 N4BP1O75113 896 aaKnown RBP12.72□□□□□ -0.37
COL11A1-211ENST00000635193 PDCLQ13371 301 aa12.72□□□□□ -0.37
COL11A1-211ENST00000635193 GGA1Q9UJY5 639 aa12.72□□□□□ -0.37
COL11A1-211ENST00000635193 ATP8A1Q9Y2Q0 1164 aa12.72□□□□□ -0.37
COL11A1-211ENST00000635193 DAAM1Q9Y4D1 1078 aa12.72□□□□□ -0.37
COL11A1-211ENST00000635193 PGRMC1O00264 195 aaKnown RBP12.72□□□□□ -0.37
COL11A1-211ENST00000635193 GIPC1O14908 333 aa12.72□□□□□ -0.37
COL11A1-211ENST00000635193 MYCLP12524 364 aaPredicted RBP12.72□□□□□ -0.37
COL11A1-211ENST00000635193 RBM26Q5T8P6 1007 aaKnown RBP12.72□□□□□ -0.37
COL11A1-211ENST00000635193 GPR108Q9NPR9 543 aa12.72□□□□□ -0.37
COL11A1-211ENST00000635193 ANGPTL2Q9UKU9 493 aa12.72□□□□□ -0.37
COL11A1-211ENST00000635193 KLRF2D3W0D1 207 aa12.72□□□□□ -0.37
COL11A1-211ENST00000635193 MMP1P03956 469 aa12.72□□□□□ -0.37
COL11A1-211ENST00000635193 TNNI1P19237 187 aa12.72□□□□□ -0.37
COL11A1-211ENST00000635193 MAN1A1P33908 653 aa12.72□□□□□ -0.37
COL11A1-211ENST00000635193 RANBP1P43487 201 aa12.72□□□□□ -0.37
COL11A1-211ENST00000635193 ACTN3Q08043 901 aaPredicted RBP12.72□□□□□ -0.37
COL11A1-211ENST00000635193 RCN2Q14257 317 aa12.72□□□□□ -0.37
COL11A1-211ENST00000635193 CNBD1Q8NA66 436 aa12.72□□□□□ -0.37
COL11A1-211ENST00000635193 NOVA2Q9UNW9 492 aaKnown RBP12.72□□□□□ -0.37
COL11A1-211ENST00000635193 CLASP1Q7Z460 1538 aa12.72□□□□□ -0.37
COL11A1-211ENST00000635193 ARHGAP4P98171 946 aa12.71□□□□□ -0.37
COL11A1-211ENST00000635193 ANKRD20A4Q4UJ75 823 aa12.71□□□□□ -0.37
COL11A1-211ENST00000635193 ANKRD20A8PQ5CZ79 823 aa12.71□□□□□ -0.37
COL11A1-211ENST00000635193 ANKRD20A2Q5SQ80 823 aa12.71□□□□□ -0.37
COL11A1-211ENST00000635193 ANKRD20A1Q5TYW2 823 aa12.71□□□□□ -0.37
COL11A1-211ENST00000635193 ARHGEF18Q6ZSZ5 1173 aa12.71□□□□□ -0.37
COL11A1-211ENST00000635193 GABPB2Q8TAK5 448 aaPredicted RBP12.71□□□□□ -0.37
COL11A1-211ENST00000635193 MAGOHBQ96A72 148 aaKnown RBP12.71□□□□□ -0.37
COL11A1-211ENST00000635193 SPDL1Q96EA4 605 aa12.71□□□□□ -0.37
COL11A1-211ENST00000635193 IWS1Q96ST2 819 aa12.71□□□□□ -0.37
COL11A1-211ENST00000635193 SUFUQ9UMX1 484 aa12.71□□□□□ -0.37
COL11A1-211ENST00000635193 PTCH1Q13635 1447 aa12.71□□□□□ -0.37
COL11A1-211ENST00000635193 LAD1O00515 517 aa12.71□□□□□ -0.37
COL11A1-211ENST00000635193 PDE6CP51160 858 aa12.71□□□□□ -0.37
COL11A1-211ENST00000635193 ZBED6P86452 979 aa12.71□□□□□ -0.37
COL11A1-211ENST00000635193 MAN2A1Q16706 1144 aa12.71□□□□□ -0.37
COL11A1-211ENST00000635193 SRLQ86TD4 932 aa12.71□□□□□ -0.37
COL11A1-211ENST00000635193 DDX25Q9UHL0 483 aaKnown RBP12.71□□□□□ -0.37
COL11A1-211ENST00000635193 PTPN22Q9Y2R2 807 aa12.71□□□□□ -0.37
COL11A1-211ENST00000635193 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.71□□□□□ -0.37
COL11A1-211ENST00000635193 AATKQ6ZMQ8 1374 aa12.71□□□□□ -0.37
COL11A1-211ENST00000635193 GNPATO15228 680 aa12.71□□□□□ -0.37
COL11A1-211ENST00000635193 EMBQ6PCB8 327 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms