RNA–Protein interactions for RNA: ENST00000629045.1

SCARNA4-201, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-201ENST00000629045 SPATC1Q76KD6 591 aa3.81□□□□□ -1.8
SCARNA4-201ENST00000629045 TMC6Q7Z403 805 aa3.81□□□□□ -1.8
SCARNA4-201ENST00000629045 PPIL6Q8IXY8 311 aa3.81□□□□□ -1.8
SCARNA4-201ENST00000629045 TMEM145Q8NBT3 493 aa3.81□□□□□ -1.8
SCARNA4-201ENST00000629045 C1orf159Q96HA4 380 aa3.81□□□□□ -1.8
SCARNA4-201ENST00000629045 SLC26A8Q96RN1 970 aa3.81□□□□□ -1.8
SCARNA4-201ENST00000629045 DNAJC2Q99543 621 aaKnown RBP3.81□□□□□ -1.8
SCARNA4-201ENST00000629045 ZNF552Q9H707 407 aaPredicted RBP3.81□□□□□ -1.8
SCARNA4-201ENST00000629045 PDLIM7Q9NR12 457 aa3.81□□□□□ -1.8
SCARNA4-201ENST00000629045 CYP26B1Q9NR63 512 aa3.81□□□□□ -1.8
SCARNA4-201ENST00000629045 ARHGEF4Q9NR80 690 aa3.81□□□□□ -1.8
SCARNA4-201ENST00000629045 KLHL14Q9P2G3 628 aa3.81□□□□□ -1.8
SCARNA4-201ENST00000629045 PFDN2Q9UHV9 154 aa3.81□□□□□ -1.8
SCARNA4-201ENST00000629045 FBXL7Q9UJT9 491 aa3.81□□□□□ -1.8
SCARNA4-201ENST00000629045 A0A1W2PQJ5 194 aa3.8□□□□□ -1.8
SCARNA4-201ENST00000629045 C7orf72A4D263 438 aa3.8□□□□□ -1.8
SCARNA4-201ENST00000629045 AGRPO00253 132 aa3.8□□□□□ -1.8
SCARNA4-201ENST00000629045 MPOP05164 745 aa3.8□□□□□ -1.8
SCARNA4-201ENST00000629045 LCP1P13796 627 aa3.8□□□□□ -1.8
SCARNA4-201ENST00000629045 NCKAP1LP55160 1127 aa3.8□□□□□ -1.8
SCARNA4-201ENST00000629045 YBX1P67809 324 aaKnown RBP3.8□□□□□ -1.8
SCARNA4-201ENST00000629045 SRSF3P84103 164 aaKnown RBP3.8□□□□□ -1.8
SCARNA4-201ENST00000629045 ZNF200P98182 395 aaPredicted RBP3.8□□□□□ -1.8
SCARNA4-201ENST00000629045 SERINC3Q13530 473 aa3.8□□□□□ -1.8
SCARNA4-201ENST00000629045 TMEM132EQ6IEE7 984 aa3.8□□□□□ -1.8
SCARNA4-201ENST00000629045 NLRP10Q86W26 655 aa3.8□□□□□ -1.8
SCARNA4-201ENST00000629045 TEX2Q8IWB9 1127 aa3.8□□□□□ -1.8
SCARNA4-201ENST00000629045 KREMEN2Q8NCW0 462 aa3.8□□□□□ -1.8
SCARNA4-201ENST00000629045 PMFBP1Q8TBY8 1022 aa3.8□□□□□ -1.8
SCARNA4-201ENST00000629045 DPF3Q92784 378 aa3.8□□□□□ -1.8
SCARNA4-201ENST00000629045 IER2Q9BTL4 223 aa3.8□□□□□ -1.8
SCARNA4-201ENST00000629045 EPN3Q9H201 632 aa3.8□□□□□ -1.8
SCARNA4-201ENST00000629045 BCAS3Q9H6U6 928 aa3.8□□□□□ -1.8
SCARNA4-201ENST00000629045 GCM1Q9NP62 436 aa3.8□□□□□ -1.8
SCARNA4-201ENST00000629045 MARCH2Q9P0N8 246 aa3.8□□□□□ -1.8
SCARNA4-201ENST00000629045 MBD1Q9UIS9 605 aaPredicted RBP3.8□□□□□ -1.8
SCARNA4-201ENST00000629045 MSRB2Q9Y3D2 182 aa3.8□□□□□ -1.8
SCARNA4-201ENST00000629045 SIT1Q9Y3P8 196 aa3.8□□□□□ -1.8
SCARNA4-201ENST00000629045 TRBV23OR9-2A0A075B6M9 112 aa3.79□□□□□ -1.8
SCARNA4-201ENST00000629045 TEX51A0A1B0GUA7 166 aa3.79□□□□□ -1.8
SCARNA4-201ENST00000629045 ZC3H12DA2A288 527 aaKnown RBP3.79□□□□□ -1.8
SCARNA4-201ENST00000629045 FAM221BA6H8Z2 402 aa3.79□□□□□ -1.8
SCARNA4-201ENST00000629045 TCAF2A6NFQ2 919 aa3.79□□□□□ -1.8
SCARNA4-201ENST00000629045 NPIPB6E9PJ23 425 aa3.79□□□□□ -1.8
SCARNA4-201ENST00000629045 NFIBO00712 420 aa3.79□□□□□ -1.8
SCARNA4-201ENST00000629045 PDPK1O15530 556 aa3.79□□□□□ -1.8
SCARNA4-201ENST00000629045 MEFVO15553 781 aaPredicted RBP3.79□□□□□ -1.8
SCARNA4-201ENST00000629045 SRGAP3O43295 1099 aa3.79□□□□□ -1.8
SCARNA4-201ENST00000629045 NPHS1O60500 1241 aa3.79□□□□□ -1.8
SCARNA4-201ENST00000629045 DIAPH1O60610 1272 aaKnown RBP3.79□□□□□ -1.8
SCARNA4-201ENST00000629045 FUCA1P04066 466 aa3.79□□□□□ -1.8
SCARNA4-201ENST00000629045 CAPNS1P04632 268 aa3.79□□□□□ -1.8
SCARNA4-201ENST00000629045 SCG5P05408 212 aa3.79□□□□□ -1.8
SCARNA4-201ENST00000629045 GLI4P10075 376 aa3.79□□□□□ -1.8
SCARNA4-201ENST00000629045 FPR2P25090 351 aa3.79□□□□□ -1.8
SCARNA4-201ENST00000629045 HOXC12P31275 282 aa3.79□□□□□ -1.8
SCARNA4-201ENST00000629045 RAP1GAPP47736 663 aa3.79□□□□□ -1.8
SCARNA4-201ENST00000629045 CORO7P57737 925 aa3.79□□□□□ -1.8
SCARNA4-201ENST00000629045 DLG4P78352 724 aa3.79□□□□□ -1.8
SCARNA4-201ENST00000629045 RASA3Q14644 834 aa3.79□□□□□ -1.8
SCARNA4-201ENST00000629045 SF3A1Q15459 793 aaKnown RBP3.79□□□□□ -1.8
SCARNA4-201ENST00000629045 MTERF2Q49AM1 385 aa3.79□□□□□ -1.8
SCARNA4-201ENST00000629045 SLC35F1Q5T1Q4 408 aa3.79□□□□□ -1.8
SCARNA4-201ENST00000629045 CILP2Q8IUL8 1156 aa3.79□□□□□ -1.8
SCARNA4-201ENST00000629045 LZTR1Q8N653 840 aa3.79□□□□□ -1.8
SCARNA4-201ENST00000629045 ST13P5Q8NFI4 369 aaPredicted RBP3.79□□□□□ -1.8
SCARNA4-201ENST00000629045 SREK1Q8WXA9 508 aaKnown RBP3.79□□□□□ -1.8
SCARNA4-201ENST00000629045 KCNN1Q92952 543 aa3.79□□□□□ -1.8
SCARNA4-201ENST00000629045 PPP1R16BQ96T49 567 aa3.79□□□□□ -1.8
SCARNA4-201ENST00000629045 MMP19Q99542 508 aa3.79□□□□□ -1.8
SCARNA4-201ENST00000629045 MTA3Q9BTC8 594 aa3.79□□□□□ -1.8
SCARNA4-201ENST00000629045 CNTD2Q9H8S5 307 aa3.79□□□□□ -1.8
SCARNA4-201ENST00000629045 CD320Q9NPF0 282 aa3.79□□□□□ -1.8
SCARNA4-201ENST00000629045 SIRT5Q9NXA8 310 aa3.79□□□□□ -1.8
SCARNA4-201ENST00000629045 SNTG2Q9NY99 539 aa3.79□□□□□ -1.8
SCARNA4-201ENST00000629045 BLACEA4D250 179 aa3.78□□□□□ -1.8
SCARNA4-201ENST00000629045 PRODHO43272 600 aa3.78□□□□□ -1.8
SCARNA4-201ENST00000629045 DLX3O60479 287 aa3.78□□□□□ -1.8
SCARNA4-201ENST00000629045 PEX10O60683 326 aa3.78□□□□□ -1.8
SCARNA4-201ENST00000629045 SEMA7AO75326 666 aa3.78□□□□□ -1.8
SCARNA4-201ENST00000629045 CYBBP04839 570 aa3.78□□□□□ -1.8
SCARNA4-201ENST00000629045 TMEM253P0C7T8 217 aa3.78□□□□□ -1.8
SCARNA4-201ENST00000629045 MED14OSP0DP75 135 aa3.78□□□□□ -1.8
SCARNA4-201ENST00000629045 GLDCP23378 1020 aa3.78□□□□□ -1.8
SCARNA4-201ENST00000629045 CDR1P51861 262 aa3.78□□□□□ -1.8
SCARNA4-201ENST00000629045 LINC00310P59036 64 aa3.78□□□□□ -1.8
SCARNA4-201ENST00000629045 JAG1P78504 1218 aa3.78□□□□□ -1.8
SCARNA4-201ENST00000629045 SSRP1Q08945 709 aaKnown RBP3.78□□□□□ -1.8
SCARNA4-201ENST00000629045 KCNAB2Q13303 367 aa3.78□□□□□ -1.8
SCARNA4-201ENST00000629045 RASGRF1Q13972 1273 aa3.78□□□□□ -1.8
SCARNA4-201ENST00000629045 HSP90AA2PQ14568 343 aaPredicted RBP3.78□□□□□ -1.8
SCARNA4-201ENST00000629045 SSPNQ14714 243 aa3.78□□□□□ -1.8
SCARNA4-201ENST00000629045 LCE3BQ5TA77 95 aa3.78□□□□□ -1.8
SCARNA4-201ENST00000629045 NBPF6Q5VWK0 638 aa3.78□□□□□ -1.8
SCARNA4-201ENST00000629045 WWC2Q6AWC2 1192 aa3.78□□□□□ -1.8
SCARNA4-201ENST00000629045 ZC3H14Q6PJT7 736 aaKnown RBP3.78□□□□□ -1.8
SCARNA4-201ENST00000629045 PAQR3Q6TCH7 311 aa3.78□□□□□ -1.8
SCARNA4-201ENST00000629045 CABP7Q86V35 215 aa3.78□□□□□ -1.8
SCARNA4-201ENST00000629045 RCBTB1Q8NDN9 531 aa3.78□□□□□ -1.8
SCARNA4-201ENST00000629045 NLGN2Q8NFZ4 835 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms