RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 GCLCP48506 637 aaPredicted RBP12.16□□□□□ -0.46
VPS8-227ENST00000625842 REM2Q8IYK8 340 aaPredicted RBP12.16□□□□□ -0.46
VPS8-227ENST00000625842 MICALL1Q8N3F8 863 aa12.16□□□□□ -0.46
VPS8-227ENST00000625842 MCPH1Q8NEM0 835 aa12.16□□□□□ -0.46
VPS8-227ENST00000625842 FAM149B1Q96BN6 582 aa12.16□□□□□ -0.46
VPS8-227ENST00000625842 ARHGEF12Q9NZN5 1544 aa12.16□□□□□ -0.46
VPS8-227ENST00000625842 LSM7Q9UK45 103 aaKnown RBP12.16□□□□□ -0.46
VPS8-227ENST00000625842 USP19O94966 1318 aa12.15□□□□□ -0.46
VPS8-227ENST00000625842 SYCE3A1L190 88 aa12.15□□□□□ -0.46
VPS8-227ENST00000625842 MANSC4A6NHS7 340 aaPredicted RBP12.15□□□□□ -0.46
VPS8-227ENST00000625842 RXRAP19793 462 aa12.15□□□□□ -0.46
VPS8-227ENST00000625842 STAT3P40763 770 aa12.15□□□□□ -0.46
VPS8-227ENST00000625842 ST8SIA6P61647 398 aa12.15□□□□□ -0.46
VPS8-227ENST00000625842 NR1H3Q13133 447 aa12.15□□□□□ -0.46
VPS8-227ENST00000625842 C9orf131Q5VYM1 1079 aa12.15□□□□□ -0.46
VPS8-227ENST00000625842 EEPD1Q7L9B9 569 aa12.15□□□□□ -0.46
VPS8-227ENST00000625842 POLR3EQ9NVU0 708 aa12.15□□□□□ -0.46
VPS8-227ENST00000625842 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.15□□□□□ -0.46
VPS8-227ENST00000625842 HPCAL4Q9UM19 191 aa12.15□□□□□ -0.46
VPS8-227ENST00000625842 UNC13AQ9UPW8 1703 aa12.15□□□□□ -0.46
VPS8-227ENST00000625842 OR52Z1P0C646 297 aa12.15□□□□□ -0.46
VPS8-227ENST00000625842 SCG2P13521 617 aa12.15□□□□□ -0.46
VPS8-227ENST00000625842 MYL7Q01449 175 aa12.15□□□□□ -0.46
VPS8-227ENST00000625842 PSMD2Q13200 908 aa12.15□□□□□ -0.46
VPS8-227ENST00000625842 IER5Q5VY09 327 aa12.15□□□□□ -0.46
VPS8-227ENST00000625842 CASC4Q6P4E1 433 aa12.15□□□□□ -0.46
VPS8-227ENST00000625842 TMX3Q96JJ7 454 aa12.15□□□□□ -0.46
VPS8-227ENST00000625842 ACCSQ96QU6 501 aa12.15□□□□□ -0.46
VPS8-227ENST00000625842 ADARB2Q9NS39 739 aaKnown RBP12.15□□□□□ -0.46
VPS8-227ENST00000625842 TBC1D22BQ9NU19 505 aa12.15□□□□□ -0.46
VPS8-227ENST00000625842 SPDYE2BA6NHP3 402 aa12.15□□□□□ -0.46
VPS8-227ENST00000625842 HOXC6P09630 235 aa12.15□□□□□ -0.46
VPS8-227ENST00000625842 SPDYE6P0CI01 402 aa12.15□□□□□ -0.46
VPS8-227ENST00000625842 RPS6KB1P23443 525 aa12.15□□□□□ -0.46
VPS8-227ENST00000625842 PTK2Q05397 1052 aa12.15□□□□□ -0.46
VPS8-227ENST00000625842 SPP2Q13103 211 aa12.15□□□□□ -0.46
VPS8-227ENST00000625842 TTBK2Q6IQ55 1244 aa12.15□□□□□ -0.46
VPS8-227ENST00000625842 SCYL2Q6P3W7 929 aa12.15□□□□□ -0.46
VPS8-227ENST00000625842 TICAM2Q86XR7 235 aa12.15□□□□□ -0.46
VPS8-227ENST00000625842 SMC5Q8IY18 1101 aa12.15□□□□□ -0.46
VPS8-227ENST00000625842 MYOCDQ8IZQ8 938 aa12.15□□□□□ -0.46
VPS8-227ENST00000625842 PCSK9Q8NBP7 692 aaKnown RBP12.15□□□□□ -0.46
VPS8-227ENST00000625842 TCEANC2Q96MN5 208 aa12.15□□□□□ -0.46
VPS8-227ENST00000625842 DOLKQ9UPQ8 538 aa12.15□□□□□ -0.46
VPS8-227ENST00000625842 SKIP12755 728 aa12.15□□□□□ -0.47
VPS8-227ENST00000625842 GPSM2P81274 684 aa12.15□□□□□ -0.47
VPS8-227ENST00000625842 ARHGAP15Q53QZ3 475 aa12.15□□□□□ -0.47
VPS8-227ENST00000625842 SNRNP48Q6IEG0 339 aaKnown RBP12.15□□□□□ -0.47
VPS8-227ENST00000625842 NKX2-3Q8TAU0 364 aa12.15□□□□□ -0.47
VPS8-227ENST00000625842 DISC1Q9NRI5 854 aa12.15□□□□□ -0.47
VPS8-227ENST00000625842 USP6P35125 1406 aa12.14□□□□□ -0.47
VPS8-227ENST00000625842 CTAGE15A4D2H0 777 aa12.14□□□□□ -0.47
VPS8-227ENST00000625842 CTAGE8P0CG41 777 aa12.14□□□□□ -0.47
VPS8-227ENST00000625842 CTAGE6Q86UF2 777 aa12.14□□□□□ -0.47
VPS8-227ENST00000625842 CTAGE4Q8IX94 777 aa12.14□□□□□ -0.47
VPS8-227ENST00000625842 RAB42Q8N4Z0 105 aa12.14□□□□□ -0.47
VPS8-227ENST00000625842 BEST2Q8NFU1 509 aa12.14□□□□□ -0.47
VPS8-227ENST00000625842 RAB20Q9NX57 234 aa12.14□□□□□ -0.47
VPS8-227ENST00000625842 STAT1P42224 750 aa12.14□□□□□ -0.47
VPS8-227ENST00000625842 KRT76Q01546 638 aa12.14□□□□□ -0.47
VPS8-227ENST00000625842 MMTAG2Q9BU76 263 aaKnown RBP12.14□□□□□ -0.47
VPS8-227ENST00000625842 EFCC1Q9HA90 598 aa12.14□□□□□ -0.47
VPS8-227ENST00000625842 GBA2Q9HCG7 927 aaPredicted RBP12.14□□□□□ -0.47
VPS8-227ENST00000625842 COPRSQ9NQ92 184 aa12.14□□□□□ -0.47
VPS8-227ENST00000625842 INPP5FQ9Y2H2 1132 aa12.14□□□□□ -0.47
VPS8-227ENST00000625842 PTCH1Q13635 1447 aa12.14□□□□□ -0.47
VPS8-227ENST00000625842 EIF3CLB5ME19 914 aaKnown RBP12.14□□□□□ -0.47
VPS8-227ENST00000625842 SASH1O94885 1247 aa12.14□□□□□ -0.47
VPS8-227ENST00000625842 MCM4P33991 863 aa12.14□□□□□ -0.47
VPS8-227ENST00000625842 PDE6CP51160 858 aa12.14□□□□□ -0.47
VPS8-227ENST00000625842 INHBEP58166 350 aa12.14□□□□□ -0.47
VPS8-227ENST00000625842 AP3B2Q13367 1082 aa12.14□□□□□ -0.47
VPS8-227ENST00000625842 RCSD1Q6JBY9 416 aa12.14□□□□□ -0.47
VPS8-227ENST00000625842 LRRC31Q6UY01 552 aa12.14□□□□□ -0.47
VPS8-227ENST00000625842 NOP9Q86U38 636 aaKnown RBP12.14□□□□□ -0.47
VPS8-227ENST00000625842 SKA1Q96BD8 255 aa12.14□□□□□ -0.47
VPS8-227ENST00000625842 EIF3CQ99613 913 aaKnown RBP12.14□□□□□ -0.47
VPS8-227ENST00000625842 MOSPD1Q9UJG1 213 aa12.14□□□□□ -0.47
VPS8-227ENST00000625842 TNKSO95271 1327 aa12.14□□□□□ -0.47
VPS8-227ENST00000625842 ZW10O43264 779 aa12.13□□□□□ -0.47
VPS8-227ENST00000625842 PIK3CAP42336 1068 aa12.13□□□□□ -0.47
VPS8-227ENST00000625842 STRIP1Q5VSL9 837 aa12.13□□□□□ -0.47
VPS8-227ENST00000625842 ARFGAP2Q8N6H7 521 aa12.13□□□□□ -0.47
VPS8-227ENST00000625842 GPRC5AQ8NFJ5 357 aa12.13□□□□□ -0.47
VPS8-227ENST00000625842 GDAP1Q8TB36 358 aa12.13□□□□□ -0.47
VPS8-227ENST00000625842 LPAR1Q92633 364 aa12.13□□□□□ -0.47
VPS8-227ENST00000625842 BACH2Q9BYV9 841 aa12.13□□□□□ -0.47
VPS8-227ENST00000625842 CUEDC2Q9H467 287 aa12.13□□□□□ -0.47
VPS8-227ENST00000625842 PTPRTO14522 1441 aa12.13□□□□□ -0.47
VPS8-227ENST00000625842 ARL4DP49703 201 aa12.13□□□□□ -0.47
VPS8-227ENST00000625842 PPP2R5DQ14738 602 aa12.13□□□□□ -0.47
VPS8-227ENST00000625842 CCDC122Q5T0U0 273 aa12.13□□□□□ -0.47
VPS8-227ENST00000625842 ANO1Q5XXA6 986 aa12.13□□□□□ -0.47
VPS8-227ENST00000625842 FANCBQ8NB91 859 aa12.13□□□□□ -0.47
VPS8-227ENST00000625842 TRPV6Q9H1D0 765 aa12.13□□□□□ -0.47
VPS8-227ENST00000625842 ELP3Q9H9T3 547 aa12.13□□□□□ -0.47
VPS8-227ENST00000625842 PCDHB8Q9UN66 801 aa12.13□□□□□ -0.47
VPS8-227ENST00000625842 HUS1O60921 280 aa12.13□□□□□ -0.47
VPS8-227ENST00000625842 CAPN15O75808 1086 aa12.13□□□□□ -0.47
VPS8-227ENST00000625842 ARL4AP40617 200 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms