RNA–Protein interactions for RNA: ENST00000622320.4

RRP12-215, Transcript of ribosomal RNA processing 12 homolog, human

TSL 4

Gene RRP12, Length 543 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RRP12-215	ENST00000622320	PRRX2	Q99811	253 aa		12.35	□□□□□ -0.43
RRP12-215	ENST00000622320	CHMP4B	Q9H444	224 aa	Known RBP	12.35	□□□□□ -0.43
RRP12-215	ENST00000622320	C1orf115	Q9H7X2	142 aa		12.35	□□□□□ -0.43
RRP12-215	ENST00000622320	ACAD9	Q9H845	621 aa		12.35	□□□□□ -0.43
RRP12-215	ENST00000622320	A1CF	Q9NQ94	594 aa	Known RBP	12.35	□□□□□ -0.43
RRP12-215	ENST00000622320	FAM86C1	Q9NVL1	165 aa		12.35	□□□□□ -0.43
RRP12-215	ENST00000622320	ZNF532	Q9HCE3	1301 aa		12.35	□□□□□ -0.43
RRP12-215	ENST00000622320	PLXNA3	P51805	1871 aa		12.34	□□□□□ -0.43
RRP12-215	ENST00000622320	MYL3	P08590	195 aa		12.34	□□□□□ -0.43
RRP12-215	ENST00000622320	OAZ1	P54368	228 aa		12.34	□□□□□ -0.43
RRP12-215	ENST00000622320	RRP1	P56182	461 aa	Known RBP	12.34	□□□□□ -0.43
RRP12-215	ENST00000622320	BFSP2	Q13515	415 aa		12.34	□□□□□ -0.43
RRP12-215	ENST00000622320	LRRFIP1	Q32MZ4	808 aa	Known RBP	12.34	□□□□□ -0.43
RRP12-215	ENST00000622320	SLC9C2	Q5TAH2	1124 aa		12.34	□□□□□ -0.43
RRP12-215	ENST00000622320	C12orf60	Q5U649	245 aa		12.34	□□□□□ -0.43
RRP12-215	ENST00000622320	IQSEC1	Q6DN90	963 aa		12.34	□□□□□ -0.43
RRP12-215	ENST00000622320	TAPT1	Q6NXT6	567 aa		12.34	□□□□□ -0.43
RRP12-215	ENST00000622320	EP400NL	Q6ZTU2	488 aa		12.34	□□□□□ -0.43
RRP12-215	ENST00000622320	RPAP2	Q8IXW5	612 aa	Predicted RBP	12.34	□□□□□ -0.43
RRP12-215	ENST00000622320	AMOTL1	Q8IY63	956 aa		12.34	□□□□□ -0.43
RRP12-215	ENST00000622320	PPP1R13L	Q8WUF5	828 aa		12.34	□□□□□ -0.43
RRP12-215	ENST00000622320	EAF2	Q96CJ1	260 aa	Predicted RBP	12.34	□□□□□ -0.43
RRP12-215	ENST00000622320	PABPC5	Q96DU9	382 aa	Known RBP	12.34	□□□□□ -0.43
RRP12-215	ENST00000622320	MRPL38	Q96DV4	380 aa	Known RBP	12.34	□□□□□ -0.43
RRP12-215	ENST00000622320	CRBN	Q96SW2	442 aa		12.34	□□□□□ -0.43
RRP12-215	ENST00000622320	RAD9A	Q99638	391 aa		12.34	□□□□□ -0.43
RRP12-215	ENST00000622320	ARMT1	Q9H993	441 aa		12.34	□□□□□ -0.43
RRP12-215	ENST00000622320	ATG2A	Q2TAZ0	1938 aa		12.34	□□□□□ -0.43
RRP12-215	ENST00000622320		F5H6K3	240 aa		12.33	□□□□□ -0.44
RRP12-215	ENST00000622320	PRKAB2	O43741	272 aa		12.33	□□□□□ -0.44
RRP12-215	ENST00000622320	KLRC3	Q07444	240 aa		12.33	□□□□□ -0.44
RRP12-215	ENST00000622320	PTPRO	Q16827	1216 aa		12.33	□□□□□ -0.44
RRP12-215	ENST00000622320	NBPF20	Q3BBV1	942 aa		12.33	□□□□□ -0.44
RRP12-215	ENST00000622320	CNKSR3	Q6P9H4	555 aa		12.33	□□□□□ -0.44
RRP12-215	ENST00000622320	BMP8A	Q7Z5Y6	402 aa		12.33	□□□□□ -0.44
RRP12-215	ENST00000622320	SUGP1	Q8IWZ8	645 aa	Known RBP	12.33	□□□□□ -0.44
RRP12-215	ENST00000622320	SIRT2	Q8IXJ6	389 aa		12.33	□□□□□ -0.44
RRP12-215	ENST00000622320	POP1	Q99575	1024 aa	Known RBP	12.33	□□□□□ -0.44
RRP12-215	ENST00000622320	C17orf80	Q9BSJ5	609 aa		12.33	□□□□□ -0.44
RRP12-215	ENST00000622320	MTG1	Q9BT17	334 aa	Predicted RBP	12.33	□□□□□ -0.44
RRP12-215	ENST00000622320	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	12.33	□□□□□ -0.44
RRP12-215	ENST00000622320	VTA1	Q9NP79	307 aa		12.33	□□□□□ -0.44
RRP12-215	ENST00000622320	RNF146	Q9NTX7	359 aa		12.33	□□□□□ -0.44
RRP12-215	ENST00000622320	NOD1	Q9Y239	953 aa		12.33	□□□□□ -0.44
RRP12-215	ENST00000622320	SPTBN4	Q9H254	2564 aa		12.32	□□□□□ -0.44
RRP12-215	ENST00000622320	TRIP12	Q14669	1992 aa	Predicted RBP	12.32	□□□□□ -0.44
RRP12-215	ENST00000622320	NLRC5	Q86WI3	1866 aa		12.32	□□□□□ -0.44
RRP12-215	ENST00000622320	TCRBV5S4A2T	A0A5A2	114 aa		12.32	□□□□□ -0.44
RRP12-215	ENST00000622320	USP17L12	C9JPN9	530 aa		12.32	□□□□□ -0.44
RRP12-215	ENST00000622320	USP17L21	D6R901	530 aa		12.32	□□□□□ -0.44
RRP12-215	ENST00000622320	SURF6	O75683	361 aa	Known RBP	12.32	□□□□□ -0.44
RRP12-215	ENST00000622320	CPT1A	P50416	773 aa		12.32	□□□□□ -0.44
RRP12-215	ENST00000622320	COL19A1	Q14993	1142 aa		12.32	□□□□□ -0.44
RRP12-215	ENST00000622320	TTF1	Q15361	905 aa	Predicted RBP	12.32	□□□□□ -0.44
RRP12-215	ENST00000622320	DUSP28	Q4G0W2	176 aa		12.32	□□□□□ -0.44
RRP12-215	ENST00000622320	NFRKB	Q6P4R8	1299 aa		12.32	□□□□□ -0.44
RRP12-215	ENST00000622320	KIAA1211	Q6ZU35	1233 aa		12.32	□□□□□ -0.44
RRP12-215	ENST00000622320	CCDC155	Q8N6L0	562 aa		12.32	□□□□□ -0.44
RRP12-215	ENST00000622320	AFAP1L1	Q8TED9	768 aa		12.32	□□□□□ -0.44
RRP12-215	ENST00000622320	GPHN	Q9NQX3	736 aa	Predicted RBP	12.32	□□□□□ -0.44
RRP12-215	ENST00000622320	ATP8A2	Q9NTI2	1148 aa		12.32	□□□□□ -0.44
RRP12-215	ENST00000622320	CTNNA3	Q9UI47	895 aa		12.32	□□□□□ -0.44
RRP12-215	ENST00000622320	MBD4	O95243	580 aa		12.31	□□□□□ -0.44
RRP12-215	ENST00000622320	TCEAL5	Q5H9L2	206 aa		12.31	□□□□□ -0.44
RRP12-215	ENST00000622320	FAM117B	Q6P1L5	589 aa		12.31	□□□□□ -0.44
RRP12-215	ENST00000622320	RNF135	Q8IUD6	432 aa		12.31	□□□□□ -0.44
RRP12-215	ENST00000622320	BANK1	Q8NDB2	785 aa		12.31	□□□□□ -0.44
RRP12-215	ENST00000622320	OR6J1	Q8NGC5	347 aa		12.31	□□□□□ -0.44
RRP12-215	ENST00000622320	CAGE1	Q8TC20	777 aa		12.31	□□□□□ -0.44
RRP12-215	ENST00000622320	EDA	Q92838	391 aa		12.31	□□□□□ -0.44
RRP12-215	ENST00000622320	CLDND1	Q9NY35	253 aa		12.31	□□□□□ -0.44
RRP12-215	ENST00000622320	NYAP2	Q9P242	653 aa		12.31	□□□□□ -0.44
RRP12-215	ENST00000622320	FEM1B	Q9UK73	627 aa		12.31	□□□□□ -0.44
RRP12-215	ENST00000622320	COL4A6	Q14031	1691 aa		12.31	□□□□□ -0.44
RRP12-215	ENST00000622320	CACNA1H	O95180	2353 aa		12.3	□□□□□ -0.44
RRP12-215	ENST00000622320	MICAL3	Q7RTP6	2002 aa		12.3	□□□□□ -0.44
RRP12-215	ENST00000622320	RALGAPA2	Q2PPJ7	1873 aa		12.3	□□□□□ -0.44
RRP12-215	ENST00000622320	TMEM221	A6NGB7	291 aa		12.3	□□□□□ -0.44
RRP12-215	ENST00000622320		M0R296	226 aa		12.3	□□□□□ -0.44
RRP12-215	ENST00000622320	PTPN11	Q06124	597 aa	Predicted RBP	12.3	□□□□□ -0.44
RRP12-215	ENST00000622320	GPNMB	Q14956	572 aa		12.3	□□□□□ -0.44
RRP12-215	ENST00000622320	SMAD2	Q15796	467 aa	Known RBP	12.3	□□□□□ -0.44
RRP12-215	ENST00000622320	PKN1	Q16512	942 aa		12.3	□□□□□ -0.44
RRP12-215	ENST00000622320	TCTN1	Q2MV58	587 aa		12.3	□□□□□ -0.44
RRP12-215	ENST00000622320	LRRC8D	Q7L1W4	858 aa		12.3	□□□□□ -0.44
RRP12-215	ENST00000622320	ERMP1	Q7Z2K6	904 aa		12.3	□□□□□ -0.44
RRP12-215	ENST00000622320	RPAIN	Q86UA6	219 aa		12.3	□□□□□ -0.44
RRP12-215	ENST00000622320	PBXIP1	Q96AQ6	731 aa		12.3	□□□□□ -0.44
RRP12-215	ENST00000622320	NSUN3	Q9H649	340 aa	Known RBP	12.3	□□□□□ -0.44
RRP12-215	ENST00000622320	MYH7	P12883	1935 aa		12.3	□□□□□ -0.44
RRP12-215	ENST00000622320	RAD50	Q92878	1312 aa		12.3	□□□□□ -0.44
RRP12-215	ENST00000622320	ABHD14A-ACY1	A0A1B0GW23	586 aa		12.29	□□□□□ -0.44
RRP12-215	ENST00000622320	EFCAB14	O75071	495 aa		12.29	□□□□□ -0.44
RRP12-215	ENST00000622320	CXCL10	P02778	98 aa		12.29	□□□□□ -0.44
RRP12-215	ENST00000622320	SELP	P16109	830 aa		12.29	□□□□□ -0.44
RRP12-215	ENST00000622320	TRIM67	Q6ZTA4	783 aa		12.29	□□□□□ -0.44
RRP12-215	ENST00000622320	FBXL6	Q8N531	539 aa		12.29	□□□□□ -0.44
RRP12-215	ENST00000622320	MORC4	Q8TE76	937 aa		12.29	□□□□□ -0.44
RRP12-215	ENST00000622320	DDRGK1	Q96HY6	314 aa		12.29	□□□□□ -0.44
RRP12-215	ENST00000622320	WDR11	Q9BZH6	1224 aa		12.29	□□□□□ -0.44

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