RNA–Protein interactions for RNA: ENST00000622259.4

SNX12-206, Transcript of sorting nexin 12, humanhuman

TSL 5 BASIC

Gene SNX12, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-206ENST00000622259 EP400NLQ6ZTU2 488 aa17.5■□□□□ 0.39
SNX12-206ENST00000622259 BMP8AQ7Z5Y6 402 aa17.5■□□□□ 0.39
SNX12-206ENST00000622259 KMT2EQ8IZD2 1858 aa17.5■□□□□ 0.39
SNX12-206ENST00000622259 LCTP09848 1927 aa17.49■□□□□ 0.39
SNX12-206ENST00000622259 SURF6O75683 361 aaKnown RBP17.49■□□□□ 0.39
SNX12-206ENST00000622259 COL19A1Q14993 1142 aa17.49■□□□□ 0.39
SNX12-206ENST00000622259 KIAA1211Q6ZU35 1233 aa17.49■□□□□ 0.39
SNX12-206ENST00000622259 RNF135Q8IUD6 432 aa17.49■□□□□ 0.39
SNX12-206ENST00000622259 FBXO22Q8NEZ5 403 aa17.49■□□□□ 0.39
SNX12-206ENST00000622259 EDAQ92838 391 aa17.49■□□□□ 0.39
SNX12-206ENST00000622259 PABPC5Q96DU9 382 aaKnown RBP17.49■□□□□ 0.39
SNX12-206ENST00000622259 MRPL38Q96DV4 380 aaKnown RBP17.49■□□□□ 0.39
SNX12-206ENST00000622259 PURBQ96QR8 312 aaKnown RBP17.49■□□□□ 0.39
SNX12-206ENST00000622259 UPF3BQ9BZI7 483 aaKnown RBP17.49■□□□□ 0.39
SNX12-206ENST00000622259 CTDP1Q9Y5B0 961 aaPredicted RBP17.49■□□□□ 0.39
SNX12-206ENST00000622259 PLXNA3P51805 1871 aa17.48■□□□□ 0.39
SNX12-206ENST00000622259 USP17L12C9JPN9 530 aa17.48■□□□□ 0.39
SNX12-206ENST00000622259 USP17L21D6R901 530 aa17.48■□□□□ 0.39
SNX12-206ENST00000622259 BCAR3O75815 825 aa17.48■□□□□ 0.39
SNX12-206ENST00000622259 LTBRP36941 435 aa17.48■□□□□ 0.39
SNX12-206ENST00000622259 PBXIP1Q96AQ6 731 aa17.48■□□□□ 0.39
SNX12-206ENST00000622259 CTAGE1Q96RT6 745 aa17.48■□□□□ 0.39
SNX12-206ENST00000622259 MTG1Q9BT17 334 aaPredicted RBP17.48■□□□□ 0.39
SNX12-206ENST00000622259 ACAD9Q9H845 621 aa17.48■□□□□ 0.39
SNX12-206ENST00000622259 POLR3EQ9NVU0 708 aa17.48■□□□□ 0.39
SNX12-206ENST00000622259 COG6Q9Y2V7 657 aa17.48■□□□□ 0.39
SNX12-206ENST00000622259 TMEM221A6NGB7 291 aa17.47■□□□□ 0.39
SNX12-206ENST00000622259 M0R296 226 aa17.47■□□□□ 0.39
SNX12-206ENST00000622259 BFSP2Q13515 415 aa17.47■□□□□ 0.39
SNX12-206ENST00000622259 CLUL1Q15846 466 aa17.47■□□□□ 0.39
SNX12-206ENST00000622259 DUSP28Q4G0W2 176 aa17.47■□□□□ 0.39
SNX12-206ENST00000622259 BANK1Q8NDB2 785 aa17.47■□□□□ 0.39
SNX12-206ENST00000622259 SSH3Q8TE77 659 aa17.47■□□□□ 0.39
SNX12-206ENST00000622259 FAM186AA6NE01 2351 aa17.46■□□□□ 0.39
SNX12-206ENST00000622259 NBNO60934 754 aa17.46■□□□□ 0.39
SNX12-206ENST00000622259 OAZ1P54368 228 aa17.46■□□□□ 0.39
SNX12-206ENST00000622259 SMAD2Q15796 467 aaKnown RBP17.46■□□□□ 0.39
SNX12-206ENST00000622259 NFRKBQ6P4R8 1299 aa17.46■□□□□ 0.39
SNX12-206ENST00000622259 CNKSR3Q6P9H4 555 aa17.46■□□□□ 0.39
SNX12-206ENST00000622259 TRIM67Q6ZTA4 783 aa17.46■□□□□ 0.39
SNX12-206ENST00000622259 RNF146Q9NTX7 359 aa17.46■□□□□ 0.39
SNX12-206ENST00000622259 CLDND1Q9NY35 253 aa17.46■□□□□ 0.39
SNX12-206ENST00000622259 FAM50BQ9Y247 325 aa17.46■□□□□ 0.39
SNX12-206ENST00000622259 CHGBP05060 677 aa17.45■□□□□ 0.38
SNX12-206ENST00000622259 DLX2Q07687 328 aaPredicted RBP17.45■□□□□ 0.38
SNX12-206ENST00000622259 LRRFIP1Q32MZ4 808 aaKnown RBP17.45■□□□□ 0.38
SNX12-206ENST00000622259 TIGD5Q53EQ6 642 aa17.45■□□□□ 0.38
SNX12-206ENST00000622259 DHX38Q92620 1227 aaKnown RBP17.45■□□□□ 0.38
SNX12-206ENST00000622259 PRRX2Q99811 253 aa17.45■□□□□ 0.38
SNX12-206ENST00000622259 VTA1Q9NP79 307 aa17.45■□□□□ 0.38
SNX12-206ENST00000622259 NYAP2Q9P242 653 aa17.45■□□□□ 0.38
SNX12-206ENST00000622259 CACNA1BQ00975 2339 aa17.45■□□□□ 0.38
SNX12-206ENST00000622259 DNAH14Q0VDD8 3507 aa17.45■□□□□ 0.38
SNX12-206ENST00000622259 ATG2AQ2TAZ0 1938 aa17.45■□□□□ 0.38
SNX12-206ENST00000622259 CCER2I3L3R5 266 aa17.44■□□□□ 0.38
SNX12-206ENST00000622259 MBD4O95243 580 aa17.44■□□□□ 0.38
SNX12-206ENST00000622259 CXCL10P02778 98 aa17.44■□□□□ 0.38
SNX12-206ENST00000622259 VCPP55072 806 aaKnown RBP17.44■□□□□ 0.38
SNX12-206ENST00000622259 EPC2Q52LR7 807 aa17.44■□□□□ 0.38
SNX12-206ENST00000622259 ASCL5Q7RTU5 278 aa17.44■□□□□ 0.38
SNX12-206ENST00000622259 RPAINQ86UA6 219 aa17.44■□□□□ 0.38
SNX12-206ENST00000622259 MORC4Q8TE76 937 aa17.44■□□□□ 0.38
SNX12-206ENST00000622259 CRBNQ96SW2 442 aa17.44■□□□□ 0.38
SNX12-206ENST00000622259 WDR11Q9BZH6 1224 aa17.44■□□□□ 0.38
SNX12-206ENST00000622259 ATP8A2Q9NTI2 1148 aa17.44■□□□□ 0.38
SNX12-206ENST00000622259 FEM1BQ9UK73 627 aa17.44■□□□□ 0.38
SNX12-206ENST00000622259 NOP58Q9Y2X3 529 aaKnown RBP17.44■□□□□ 0.38
SNX12-206ENST00000622259 COL4A6Q14031 1691 aa17.44■□□□□ 0.38
SNX12-206ENST00000622259 MYH4Q9Y623 1939 aa17.43■□□□□ 0.38
SNX12-206ENST00000622259 VPS13AQ96RL7 3174 aa17.43■□□□□ 0.38
SNX12-206ENST00000622259 MBTPS2O43462 519 aa17.43■□□□□ 0.38
SNX12-206ENST00000622259 RGS20O76081 388 aa17.43■□□□□ 0.38
SNX12-206ENST00000622259 CPT1AP50416 773 aa17.43■□□□□ 0.38
SNX12-206ENST00000622259 ATP8B2P98198 1209 aa17.43■□□□□ 0.38
SNX12-206ENST00000622259 PTPROQ16827 1216 aa17.43■□□□□ 0.38
SNX12-206ENST00000622259 MUM1L1Q5H9M0 696 aa17.43■□□□□ 0.38
SNX12-206ENST00000622259 CTR9Q6PD62 1173 aa17.43■□□□□ 0.38
SNX12-206ENST00000622259 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.43■□□□□ 0.38
SNX12-206ENST00000622259 STK11IPQ8N1F8 1099 aa17.43■□□□□ 0.38
SNX12-206ENST00000622259 OR6J1Q8NGC5 347 aa17.43■□□□□ 0.38
SNX12-206ENST00000622259 AFAP1L1Q8TED9 768 aa17.43■□□□□ 0.38
SNX12-206ENST00000622259 ARHGAP45Q92619 1136 aa17.43■□□□□ 0.38
SNX12-206ENST00000622259 ATOH1Q92858 354 aaPredicted RBP17.43■□□□□ 0.38
SNX12-206ENST00000622259 TRERF1Q96PN7 1200 aa17.43■□□□□ 0.38
SNX12-206ENST00000622259 GPHNQ9NQX3 736 aaPredicted RBP17.43■□□□□ 0.38
SNX12-206ENST00000622259 CYP39A1Q9NYL5 469 aa17.43■□□□□ 0.38
SNX12-206ENST00000622259 CLIP2Q9UDT6 1046 aa17.43■□□□□ 0.38
SNX12-206ENST00000622259 CTNNA3Q9UI47 895 aa17.43■□□□□ 0.38
SNX12-206ENST00000622259 NOD1Q9Y239 953 aa17.43■□□□□ 0.38
SNX12-206ENST00000622259 ABHD14A-ACY1A0A1B0GW23 586 aa17.42■□□□□ 0.38
SNX12-206ENST00000622259 SELPP16109 830 aa17.42■□□□□ 0.38
SNX12-206ENST00000622259 RASA1P20936 1047 aa17.42■□□□□ 0.38
SNX12-206ENST00000622259 PTPN11Q06124 597 aaPredicted RBP17.42■□□□□ 0.38
SNX12-206ENST00000622259 PTGISQ16647 500 aa17.42■□□□□ 0.38
SNX12-206ENST00000622259 LRRC8DQ7L1W4 858 aa17.42■□□□□ 0.38
SNX12-206ENST00000622259 SUGP1Q8IWZ8 645 aaKnown RBP17.42■□□□□ 0.38
SNX12-206ENST00000622259 TRMT2AQ8IZ69 625 aaKnown RBP17.42■□□□□ 0.38
SNX12-206ENST00000622259 FBXL6Q8N531 539 aa17.42■□□□□ 0.38
SNX12-206ENST00000622259 CAGE1Q8TC20 777 aa17.42■□□□□ 0.38
SNX12-206ENST00000622259 COPS5Q92905 334 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms