RNA–Protein interactions for RNA: ENST00000621269.4

ATXN3-253, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-253ENST00000621269 USH1GQ495M9 461 aa28.1■■■□□ 2.09
ATXN3-253ENST00000621269 FAM109BQ6ICB4 259 aaPredicted RBP28.1■■■□□ 2.09
ATXN3-253ENST00000621269 ENAHQ8N8S7 591 aaPredicted RBP28.1■■■□□ 2.09
ATXN3-253ENST00000621269 RUFY2Q8WXA3 655 aa28.1■■■□□ 2.09
ATXN3-253ENST00000621269 TNKSO95271 1327 aa28.1■■■□□ 2.09
ATXN3-253ENST00000621269 TIMP1P01033 207 aa28.09■■■□□ 2.09
ATXN3-253ENST00000621269 CXCL17Q6UXB2 119 aa28.09■■■□□ 2.09
ATXN3-253ENST00000621269 CPVLQ9H3G5 476 aa28.09■■■□□ 2.09
ATXN3-253ENST00000621269 RAD50Q92878 1312 aa28.09■■■□□ 2.09
ATXN3-253ENST00000621269 RPS6P62753 249 aaKnown RBP28.08■■■□□ 2.09
ATXN3-253ENST00000621269 ASPRV1Q53RT3 343 aa28.08■■■□□ 2.09
ATXN3-253ENST00000621269 IL25Q9H293 177 aa28.08■■■□□ 2.09
ATXN3-253ENST00000621269 TBX21Q9UL17 535 aa28.08■■■□□ 2.09
ATXN3-253ENST00000621269 LRRC37A2A6NM11 1700 aa28.07■■■□□ 2.08
ATXN3-253ENST00000621269 B4DLN1 442 aa28.07■■■□□ 2.08
ATXN3-253ENST00000621269 PARP1P09874 1014 aaKnown RBP28.07■■■□□ 2.08
ATXN3-253ENST00000621269 MRPL12P52815 198 aaKnown RBP28.07■■■□□ 2.08
ATXN3-253ENST00000621269 PDE4DQ08499 809 aa28.07■■■□□ 2.08
ATXN3-253ENST00000621269 CDC37Q16543 378 aaPredicted RBP28.07■■■□□ 2.08
ATXN3-253ENST00000621269 DUSP28Q4G0W2 176 aa28.07■■■□□ 2.08
ATXN3-253ENST00000621269 WDR11Q9BZH6 1224 aa28.07■■■□□ 2.08
ATXN3-253ENST00000621269 STXBP5LQ9Y2K9 1186 aa28.07■■■□□ 2.08
ATXN3-253ENST00000621269 DHX16O60231 1041 aaKnown RBP28.06■■■□□ 2.08
ATXN3-253ENST00000621269 PTGS1P23219 599 aa28.06■■■□□ 2.08
ATXN3-253ENST00000621269 EPHB4P54760 987 aa28.06■■■□□ 2.08
ATXN3-253ENST00000621269 TMEM63BQ5T3F8 832 aa28.06■■■□□ 2.08
ATXN3-253ENST00000621269 IFIT1BQ5T764 474 aaKnown RBP28.06■■■□□ 2.08
ATXN3-253ENST00000621269 ZNF697Q5TEC3 545 aa28.06■■■□□ 2.08
ATXN3-253ENST00000621269 FAM126BQ8IXS8 530 aa28.06■■■□□ 2.08
ATXN3-253ENST00000621269 ADGRF4Q8IZF3 695 aa28.06■■■□□ 2.08
ATXN3-253ENST00000621269 RGS22Q8NE09 1264 aa28.06■■■□□ 2.08
ATXN3-253ENST00000621269 DNERQ8NFT8 737 aa28.06■■■□□ 2.08
ATXN3-253ENST00000621269 RNPC3Q96LT9 517 aaKnown RBP28.06■■■□□ 2.08
ATXN3-253ENST00000621269 TRDNQ13061 729 aa28.05■■■□□ 2.08
ATXN3-253ENST00000621269 ITGA7Q13683 1181 aa28.05■■■□□ 2.08
ATXN3-253ENST00000621269 MFSD5Q6N075 450 aa28.05■■■□□ 2.08
ATXN3-253ENST00000621269 SLC17A8Q8NDX2 589 aa28.05■■■□□ 2.08
ATXN3-253ENST00000621269 ABCB11O95342 1321 aa28.04■■■□□ 2.08
ATXN3-253ENST00000621269 CHMLP26374 656 aa28.04■■■□□ 2.08
ATXN3-253ENST00000621269 SMAD3P84022 425 aaKnown RBP28.04■■■□□ 2.08
ATXN3-253ENST00000621269 SEZ6LQ9BYH1 1024 aa28.04■■■□□ 2.08
ATXN3-253ENST00000621269 LCTP09848 1927 aa28.04■■■□□ 2.08
ATXN3-253ENST00000621269 RBM47A0AV96 593 aaKnown RBP28.03■■■□□ 2.08
ATXN3-253ENST00000621269 TMEM199Q8N511 208 aa28.03■■■□□ 2.08
ATXN3-253ENST00000621269 SLC43A3Q8NBI5 491 aa28.03■■■□□ 2.08
ATXN3-253ENST00000621269 FAM161BQ96MY7 647 aa28.03■■■□□ 2.08
ATXN3-253ENST00000621269 MAF1Q9H063 256 aa28.03■■■□□ 2.08
ATXN3-253ENST00000621269 VAT1LQ9HCJ6 419 aa28.03■■■□□ 2.08
ATXN3-253ENST00000621269 U3KPZ7 1027 aaPredicted RBP28.03■■■□□ 2.08
ATXN3-253ENST00000621269 PPIGQ13427 754 aaKnown RBP eCLIP28.02■■■□□ 2.08
ATXN3-253ENST00000621269 MCF2L2Q86YR7 1114 aa28.02■■■□□ 2.08
ATXN3-253ENST00000621269 CD4P01730 458 aa28.01■■■□□ 2.07
ATXN3-253ENST00000621269 EDNRBP24530 442 aa28.01■■■□□ 2.07
ATXN3-253ENST00000621269 CPT1AP50416 773 aa28.01■■■□□ 2.07
ATXN3-253ENST00000621269 QRICH1Q2TAL8 776 aa28.01■■■□□ 2.07
ATXN3-253ENST00000621269 CYB5R4Q7L1T6 521 aa28.01■■■□□ 2.07
ATXN3-253ENST00000621269 FBXO11Q86XK2 927 aa28.01■■■□□ 2.07
ATXN3-253ENST00000621269 PPP1R12CQ9BZL4 782 aa28.01■■■□□ 2.07
ATXN3-253ENST00000621269 POLR3EQ9NVU0 708 aa28.01■■■□□ 2.07
ATXN3-253ENST00000621269 NKRFO15226 690 aaKnown RBP eCLIP28■■■□□ 2.07
ATXN3-253ENST00000621269 PSMC6P62333 389 aa28■■■□□ 2.07
ATXN3-253ENST00000621269 PTH1RQ03431 593 aa28■■■□□ 2.07
ATXN3-253ENST00000621269 PPP2R5BQ15173 497 aa28■■■□□ 2.07
ATXN3-253ENST00000621269 BRDTQ58F21 947 aaPredicted RBP28■■■□□ 2.07
ATXN3-253ENST00000621269 OR6J1Q8NGC5 347 aa28■■■□□ 2.07
ATXN3-253ENST00000621269 SCFD2Q8WU76 684 aa28■■■□□ 2.07
ATXN3-253ENST00000621269 JMJD4Q9H9V9 463 aa28■■■□□ 2.07
ATXN3-253ENST00000621269 GPHNQ9NQX3 736 aaPredicted RBP28■■■□□ 2.07
ATXN3-253ENST00000621269 MRPL11Q9Y3B7 192 aaKnown RBP28■■■□□ 2.07
ATXN3-253ENST00000621269 CYP21A2P08686 494 aa27.99■■■□□ 2.07
ATXN3-253ENST00000621269 SEC23AQ15436 765 aa27.99■■■□□ 2.07
ATXN3-253ENST00000621269 LAMA2P24043 3122 aaKnown RBP27.99■■■□□ 2.07
ATXN3-253ENST00000621269 GRIN2DO15399 1336 aa27.98■■■□□ 2.07
ATXN3-253ENST00000621269 MYL3P08590 195 aa27.98■■■□□ 2.07
ATXN3-253ENST00000621269 CSF2RAP15509 400 aa27.98■■■□□ 2.07
ATXN3-253ENST00000621269 NSUN6Q8TEA1 469 aaKnown RBP27.98■■■□□ 2.07
ATXN3-253ENST00000621269 TBC1D5Q92609 795 aa27.98■■■□□ 2.07
ATXN3-253ENST00000621269 GUCD1Q96NT3 240 aa27.98■■■□□ 2.07
ATXN3-253ENST00000621269 ERICH2A1L162 156 aa27.97■■■□□ 2.07
ATXN3-253ENST00000621269 KLRF2D3W0D1 207 aa27.97■■■□□ 2.07
ATXN3-253ENST00000621269 TXNP10599 105 aaKnown RBP27.97■■■□□ 2.07
ATXN3-253ENST00000621269 RALYLQ86SE5 291 aaKnown RBP27.97■■■□□ 2.07
ATXN3-253ENST00000621269 STAG2Q8N3U4 1231 aa27.97■■■□□ 2.07
ATXN3-253ENST00000621269 SYTL5Q8TDW5 730 aaPredicted RBP27.97■■■□□ 2.07
ATXN3-253ENST00000621269 BUD13Q9BRD0 619 aaKnown RBP eCLIP27.97■■■□□ 2.07
ATXN3-253ENST00000621269 HIPK3Q9H422 1215 aa27.97■■■□□ 2.07
ATXN3-253ENST00000621269 HSFX4A0A1B0GTS1 333 aaPredicted RBP27.96■■■□□ 2.07
ATXN3-253ENST00000621269 HSFX3A0A1B0GWH4 333 aaPredicted RBP27.96■■■□□ 2.07
ATXN3-253ENST00000621269 IFIT3O14879 490 aaKnown RBP27.96■■■□□ 2.07
ATXN3-253ENST00000621269 SGSM2O43147 1006 aa27.96■■■□□ 2.07
ATXN3-253ENST00000621269 CYP2C18P33260 490 aa27.96■■■□□ 2.07
ATXN3-253ENST00000621269 TTLL4Q14679 1199 aa27.96■■■□□ 2.07
ATXN3-253ENST00000621269 TAAR1Q96RJ0 339 aa27.96■■■□□ 2.07
ATXN3-253ENST00000621269 AMNQ9BXJ7 453 aa27.96■■■□□ 2.07
ATXN3-253ENST00000621269 TRPV6Q9H1D0 765 aa27.96■■■□□ 2.07
ATXN3-253ENST00000621269 SEMA6BQ9H3T3 888 aa27.96■■■□□ 2.07
ATXN3-253ENST00000621269 COL6A3P12111 3177 aa27.96■■■□□ 2.07
ATXN3-253ENST00000621269 PURAQ00577 322 aaKnown RBP27.95■■■□□ 2.06
ATXN3-253ENST00000621269 SART3Q15020 963 aaKnown RBP27.95■■■□□ 2.06
ATXN3-253ENST00000621269 NCOA7Q8NI08 942 aa27.95■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms