RNA–Protein interactions for RNA: ENST00000621242.1

SNHG28-203, Transcript of small nucleolar RNA host gene 28, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNHG28, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28-203ENST00000621242 SUPT20HL2P0C7V6 817 aa18.49■□□□□ 0.55
SNHG28-203ENST00000621242 GNAT2P19087 354 aa18.49■□□□□ 0.55
SNHG28-203ENST00000621242 HOXD11P31277 338 aaPredicted RBP18.49■□□□□ 0.55
SNHG28-203ENST00000621242 SLC1A4P43007 532 aa18.49■□□□□ 0.55
SNHG28-203ENST00000621242 TFAP4Q01664 338 aa18.49■□□□□ 0.55
SNHG28-203ENST00000621242 KCTD1Q719H9 257 aa18.49■□□□□ 0.55
SNHG28-203ENST00000621242 IFNL3Q8IZI9 196 aa18.49■□□□□ 0.55
SNHG28-203ENST00000621242 GMCL1Q96IK5 515 aa18.49■□□□□ 0.55
SNHG28-203ENST00000621242 LRFN3Q9BTN0 628 aa18.49■□□□□ 0.55
SNHG28-203ENST00000621242 VTA1Q9NP79 307 aa18.49■□□□□ 0.55
SNHG28-203ENST00000621242 SCN10AQ9Y5Y9 1956 aa18.49■□□□□ 0.55
SNHG28-203ENST00000621242 PTPRSQ13332 1948 aa18.49■□□□□ 0.55
SNHG28-203ENST00000621242 TANC1Q9C0D5 1861 aa18.48■□□□□ 0.55
SNHG28-203ENST00000621242 PATL2C9JE40 543 aaKnown RBP18.48■□□□□ 0.55
SNHG28-203ENST00000621242 DUSP28Q4G0W2 176 aa18.48■□□□□ 0.55
SNHG28-203ENST00000621242 NSMFQ6X4W1 530 aa18.48■□□□□ 0.55
SNHG28-203ENST00000621242 POLR3EQ9NVU0 708 aa18.48■□□□□ 0.55
SNHG28-203ENST00000621242 PRR12Q9ULL5 1215 aa18.48■□□□□ 0.55
SNHG28-203ENST00000621242 COG5Q9UP83 839 aa18.48■□□□□ 0.55
SNHG28-203ENST00000621242 TLL1O43897 1013 aa18.47■□□□□ 0.55
SNHG28-203ENST00000621242 PLA2G6O60733 806 aa18.47■□□□□ 0.55
SNHG28-203ENST00000621242 ARHGEF15O94989 841 aa18.47■□□□□ 0.55
SNHG28-203ENST00000621242 MYL3P08590 195 aa18.47■□□□□ 0.55
SNHG28-203ENST00000621242 ACTN1P12814 892 aa18.47■□□□□ 0.55
SNHG28-203ENST00000621242 PURAQ00577 322 aaKnown RBP18.47■□□□□ 0.55
SNHG28-203ENST00000621242 PDE4BQ07343 736 aa18.47■□□□□ 0.55
SNHG28-203ENST00000621242 RASGRP2Q7LDG7 609 aa18.47■□□□□ 0.55
SNHG28-203ENST00000621242 MORC4Q8TE76 937 aa18.47■□□□□ 0.55
SNHG28-203ENST00000621242 ARNTL2Q8WYA1 636 aa18.47■□□□□ 0.55
SNHG28-203ENST00000621242 SLC9A7Q96T83 725 aa18.47■□□□□ 0.55
SNHG28-203ENST00000621242 ZFYP08048 801 aaPredicted RBP18.46■□□□□ 0.55
SNHG28-203ENST00000621242 TAP1Q03518 808 aa18.46■□□□□ 0.55
SNHG28-203ENST00000621242 TSHZ3Q63HK5 1081 aa18.46■□□□□ 0.55
SNHG28-203ENST00000621242 RCSD1Q6JBY9 416 aa18.46■□□□□ 0.55
SNHG28-203ENST00000621242 PPP1R13LQ8WUF5 828 aa18.46■□□□□ 0.55
SNHG28-203ENST00000621242 WDR11Q9BZH6 1224 aa18.46■□□□□ 0.55
SNHG28-203ENST00000621242 CCPG1Q9ULG6 757 aa18.46■□□□□ 0.55
SNHG28-203ENST00000621242 STX8Q9UNK0 236 aa18.46■□□□□ 0.55
SNHG28-203ENST00000621242 CPT1AP50416 773 aa18.45■□□□□ 0.54
SNHG28-203ENST00000621242 NBPF20Q3BBV1 942 aa18.45■□□□□ 0.54
SNHG28-203ENST00000621242 FAM47CQ5HY64 1035 aa18.45■□□□□ 0.54
SNHG28-203ENST00000621242 PHOSPHO2Q8TCD6 241 aa18.45■□□□□ 0.54
SNHG28-203ENST00000621242 SEC62Q99442 399 aaKnown RBP18.45■□□□□ 0.54
SNHG28-203ENST00000621242 HCN4Q9Y3Q4 1203 aa18.45■□□□□ 0.54
SNHG28-203ENST00000621242 MUC6Q6W4X9 2439 aa18.44■□□□□ 0.54
SNHG28-203ENST00000621242 COL4A4P53420 1690 aaPredicted RBP18.44■□□□□ 0.54
SNHG28-203ENST00000621242 PIEZO1Q92508 2521 aa18.44■□□□□ 0.54
SNHG28-203ENST00000621242 SLC3A2P08195 630 aaKnown RBP18.44■□□□□ 0.54
SNHG28-203ENST00000621242 IQCF3P0C7M6 154 aa18.44■□□□□ 0.54
SNHG28-203ENST00000621242 RFC2P35250 354 aa18.44■□□□□ 0.54
SNHG28-203ENST00000621242 ALDH5A1P51649 535 aaPredicted RBP18.44■□□□□ 0.54
SNHG28-203ENST00000621242 PPARAQ07869 468 aa18.44■□□□□ 0.54
SNHG28-203ENST00000621242 BAATQ14032 418 aaPredicted RBP18.44■□□□□ 0.54
SNHG28-203ENST00000621242 TMEM31Q5JXX7 168 aa18.44■□□□□ 0.54
SNHG28-203ENST00000621242 HERC6Q8IVU3 1022 aa18.44■□□□□ 0.54
SNHG28-203ENST00000621242 OR6J1Q8NGC5 347 aa18.44■□□□□ 0.54
SNHG28-203ENST00000621242 HLA-CQ95604 372 aa18.44■□□□□ 0.54
SNHG28-203ENST00000621242 MTG1Q9BT17 334 aaPredicted RBP18.44■□□□□ 0.54
SNHG28-203ENST00000621242 NACAP1Q9BZK3 213 aa18.44■□□□□ 0.54
SNHG28-203ENST00000621242 FTOQ9C0B1 505 aaKnown RBP eCLIP18.44■□□□□ 0.54
SNHG28-203ENST00000621242 GPHNQ9NQX3 736 aaPredicted RBP18.44■□□□□ 0.54
SNHG28-203ENST00000621242 ADD3Q9UEY8 706 aaKnown RBP18.44■□□□□ 0.54
SNHG28-203ENST00000621242 MTMR7Q9Y216 660 aa18.44■□□□□ 0.54
SNHG28-203ENST00000621242 ARIH1Q9Y4X5 557 aaPredicted RBP18.44■□□□□ 0.54
SNHG28-203ENST00000621242 KIF28PB7ZC32 967 aa18.43■□□□□ 0.54
SNHG28-203ENST00000621242 NMT2O60551 498 aa18.43■□□□□ 0.54
SNHG28-203ENST00000621242 ICAM1P05362 532 aa18.43■□□□□ 0.54
SNHG28-203ENST00000621242 GRB10Q13322 594 aa18.43■□□□□ 0.54
SNHG28-203ENST00000621242 SPRED2Q7Z698 418 aa18.43■□□□□ 0.54
SNHG28-203ENST00000621242 RETREG2Q8NC44 543 aa18.43■□□□□ 0.54
SNHG28-203ENST00000621242 KHSRPQ92945 711 aaKnown RBP eCLIP18.43■□□□□ 0.54
SNHG28-203ENST00000621242 NAPBQ9H115 298 aa18.43■□□□□ 0.54
SNHG28-203ENST00000621242 CHMP4BQ9H444 224 aaKnown RBP18.43■□□□□ 0.54
SNHG28-203ENST00000621242 IL17RBQ9NRM6 502 aa18.43■□□□□ 0.54
SNHG28-203ENST00000621242 RBM47A0AV96 593 aaKnown RBP18.42■□□□□ 0.54
SNHG28-203ENST00000621242 PITPNM1O00562 1244 aa18.42■□□□□ 0.54
SNHG28-203ENST00000621242 INCENPQ9NQS7 918 aa18.42■□□□□ 0.54
SNHG28-203ENST00000621242 TSPY2A6NKD2 308 aa18.41■□□□□ 0.54
SNHG28-203ENST00000621242 NFIBO00712 420 aa18.41■□□□□ 0.54
SNHG28-203ENST00000621242 LPXNO60711 386 aa18.41■□□□□ 0.54
SNHG28-203ENST00000621242 PPP4R3BQ5MIZ7 849 aa18.41■□□□□ 0.54
SNHG28-203ENST00000621242 TTBK2Q6IQ55 1244 aa18.41■□□□□ 0.54
SNHG28-203ENST00000621242 NFRKBQ6P4R8 1299 aa18.41■□□□□ 0.54
SNHG28-203ENST00000621242 GPATCH3Q96I76 525 aa18.41■□□□□ 0.54
SNHG28-203ENST00000621242 RANBP17Q9H2T7 1088 aaKnown RBP18.41■□□□□ 0.54
SNHG28-203ENST00000621242 PTPDC1A2A3K4 754 aa18.4■□□□□ 0.54
SNHG28-203ENST00000621242 SLC16A2P36021 539 aa18.4■□□□□ 0.54
SNHG28-203ENST00000621242 CTDSPL2Q05D32 466 aa18.4■□□□□ 0.54
SNHG28-203ENST00000621242 BFSP2Q13515 415 aa18.4■□□□□ 0.54
SNHG28-203ENST00000621242 CCDC96Q2M329 555 aa18.4■□□□□ 0.54
SNHG28-203ENST00000621242 BRDTQ58F21 947 aaPredicted RBP18.4■□□□□ 0.54
SNHG28-203ENST00000621242 COPS5Q92905 334 aa18.4■□□□□ 0.54
SNHG28-203ENST00000621242 C11orf16Q9NQ32 467 aa18.4■□□□□ 0.54
SNHG28-203ENST00000621242 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.4■□□□□ 0.54
SNHG28-203ENST00000621242 LOC102724159A0A0B4J2E5 919 aa18.39■□□□□ 0.53
SNHG28-203ENST00000621242 LCHNA4D1U4 455 aa18.39■□□□□ 0.53
SNHG28-203ENST00000621242 FAM86C2PA6NEL3 165 aa18.39■□□□□ 0.53
SNHG28-203ENST00000621242 A6NJR5 290 aa18.39■□□□□ 0.53
SNHG28-203ENST00000621242 GPR37L1O60883 481 aa18.39■□□□□ 0.53
SNHG28-203ENST00000621242 CALML3P27482 149 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms