RNA–Protein interactions for RNA: ENST00000620536.4

ATXN3-252, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 1,044 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-252ENST00000620536 USH1GQ495M9 461 aa28.1■■■□□ 2.09
ATXN3-252ENST00000620536 FAM109BQ6ICB4 259 aaPredicted RBP28.1■■■□□ 2.09
ATXN3-252ENST00000620536 ENAHQ8N8S7 591 aaPredicted RBP28.1■■■□□ 2.09
ATXN3-252ENST00000620536 RUFY2Q8WXA3 655 aa28.1■■■□□ 2.09
ATXN3-252ENST00000620536 TNKSO95271 1327 aa28.1■■■□□ 2.09
ATXN3-252ENST00000620536 TIMP1P01033 207 aa28.09■■■□□ 2.09
ATXN3-252ENST00000620536 CXCL17Q6UXB2 119 aa28.09■■■□□ 2.09
ATXN3-252ENST00000620536 CPVLQ9H3G5 476 aa28.09■■■□□ 2.09
ATXN3-252ENST00000620536 RAD50Q92878 1312 aa28.09■■■□□ 2.09
ATXN3-252ENST00000620536 RPS6P62753 249 aaKnown RBP28.08■■■□□ 2.09
ATXN3-252ENST00000620536 ASPRV1Q53RT3 343 aa28.08■■■□□ 2.09
ATXN3-252ENST00000620536 IL25Q9H293 177 aa28.08■■■□□ 2.09
ATXN3-252ENST00000620536 TBX21Q9UL17 535 aa28.08■■■□□ 2.09
ATXN3-252ENST00000620536 LRRC37A2A6NM11 1700 aa28.07■■■□□ 2.08
ATXN3-252ENST00000620536 B4DLN1 442 aa28.07■■■□□ 2.08
ATXN3-252ENST00000620536 PARP1P09874 1014 aaKnown RBP28.07■■■□□ 2.08
ATXN3-252ENST00000620536 MRPL12P52815 198 aaKnown RBP28.07■■■□□ 2.08
ATXN3-252ENST00000620536 PDE4DQ08499 809 aa28.07■■■□□ 2.08
ATXN3-252ENST00000620536 CDC37Q16543 378 aaPredicted RBP28.07■■■□□ 2.08
ATXN3-252ENST00000620536 DUSP28Q4G0W2 176 aa28.07■■■□□ 2.08
ATXN3-252ENST00000620536 WDR11Q9BZH6 1224 aa28.07■■■□□ 2.08
ATXN3-252ENST00000620536 STXBP5LQ9Y2K9 1186 aa28.07■■■□□ 2.08
ATXN3-252ENST00000620536 DHX16O60231 1041 aaKnown RBP28.06■■■□□ 2.08
ATXN3-252ENST00000620536 PTGS1P23219 599 aa28.06■■■□□ 2.08
ATXN3-252ENST00000620536 EPHB4P54760 987 aa28.06■■■□□ 2.08
ATXN3-252ENST00000620536 TMEM63BQ5T3F8 832 aa28.06■■■□□ 2.08
ATXN3-252ENST00000620536 IFIT1BQ5T764 474 aaKnown RBP28.06■■■□□ 2.08
ATXN3-252ENST00000620536 ZNF697Q5TEC3 545 aa28.06■■■□□ 2.08
ATXN3-252ENST00000620536 FAM126BQ8IXS8 530 aa28.06■■■□□ 2.08
ATXN3-252ENST00000620536 ADGRF4Q8IZF3 695 aa28.06■■■□□ 2.08
ATXN3-252ENST00000620536 RGS22Q8NE09 1264 aa28.06■■■□□ 2.08
ATXN3-252ENST00000620536 DNERQ8NFT8 737 aa28.06■■■□□ 2.08
ATXN3-252ENST00000620536 RNPC3Q96LT9 517 aaKnown RBP28.06■■■□□ 2.08
ATXN3-252ENST00000620536 TRDNQ13061 729 aa28.05■■■□□ 2.08
ATXN3-252ENST00000620536 ITGA7Q13683 1181 aa28.05■■■□□ 2.08
ATXN3-252ENST00000620536 MFSD5Q6N075 450 aa28.05■■■□□ 2.08
ATXN3-252ENST00000620536 SLC17A8Q8NDX2 589 aa28.05■■■□□ 2.08
ATXN3-252ENST00000620536 ABCB11O95342 1321 aa28.04■■■□□ 2.08
ATXN3-252ENST00000620536 CHMLP26374 656 aa28.04■■■□□ 2.08
ATXN3-252ENST00000620536 SMAD3P84022 425 aaKnown RBP28.04■■■□□ 2.08
ATXN3-252ENST00000620536 SEZ6LQ9BYH1 1024 aa28.04■■■□□ 2.08
ATXN3-252ENST00000620536 LCTP09848 1927 aa28.04■■■□□ 2.08
ATXN3-252ENST00000620536 RBM47A0AV96 593 aaKnown RBP28.03■■■□□ 2.08
ATXN3-252ENST00000620536 TMEM199Q8N511 208 aa28.03■■■□□ 2.08
ATXN3-252ENST00000620536 SLC43A3Q8NBI5 491 aa28.03■■■□□ 2.08
ATXN3-252ENST00000620536 FAM161BQ96MY7 647 aa28.03■■■□□ 2.08
ATXN3-252ENST00000620536 MAF1Q9H063 256 aa28.03■■■□□ 2.08
ATXN3-252ENST00000620536 VAT1LQ9HCJ6 419 aa28.03■■■□□ 2.08
ATXN3-252ENST00000620536 U3KPZ7 1027 aaPredicted RBP28.03■■■□□ 2.08
ATXN3-252ENST00000620536 PPIGQ13427 754 aaKnown RBP eCLIP28.02■■■□□ 2.08
ATXN3-252ENST00000620536 MCF2L2Q86YR7 1114 aa28.02■■■□□ 2.08
ATXN3-252ENST00000620536 CD4P01730 458 aa28.01■■■□□ 2.07
ATXN3-252ENST00000620536 EDNRBP24530 442 aa28.01■■■□□ 2.07
ATXN3-252ENST00000620536 CPT1AP50416 773 aa28.01■■■□□ 2.07
ATXN3-252ENST00000620536 QRICH1Q2TAL8 776 aa28.01■■■□□ 2.07
ATXN3-252ENST00000620536 CYB5R4Q7L1T6 521 aa28.01■■■□□ 2.07
ATXN3-252ENST00000620536 FBXO11Q86XK2 927 aa28.01■■■□□ 2.07
ATXN3-252ENST00000620536 PPP1R12CQ9BZL4 782 aa28.01■■■□□ 2.07
ATXN3-252ENST00000620536 POLR3EQ9NVU0 708 aa28.01■■■□□ 2.07
ATXN3-252ENST00000620536 NKRFO15226 690 aaKnown RBP eCLIP28■■■□□ 2.07
ATXN3-252ENST00000620536 PSMC6P62333 389 aa28■■■□□ 2.07
ATXN3-252ENST00000620536 PTH1RQ03431 593 aa28■■■□□ 2.07
ATXN3-252ENST00000620536 PPP2R5BQ15173 497 aa28■■■□□ 2.07
ATXN3-252ENST00000620536 BRDTQ58F21 947 aaPredicted RBP28■■■□□ 2.07
ATXN3-252ENST00000620536 OR6J1Q8NGC5 347 aa28■■■□□ 2.07
ATXN3-252ENST00000620536 SCFD2Q8WU76 684 aa28■■■□□ 2.07
ATXN3-252ENST00000620536 JMJD4Q9H9V9 463 aa28■■■□□ 2.07
ATXN3-252ENST00000620536 GPHNQ9NQX3 736 aaPredicted RBP28■■■□□ 2.07
ATXN3-252ENST00000620536 MRPL11Q9Y3B7 192 aaKnown RBP28■■■□□ 2.07
ATXN3-252ENST00000620536 CYP21A2P08686 494 aa27.99■■■□□ 2.07
ATXN3-252ENST00000620536 SEC23AQ15436 765 aa27.99■■■□□ 2.07
ATXN3-252ENST00000620536 LAMA2P24043 3122 aaKnown RBP27.99■■■□□ 2.07
ATXN3-252ENST00000620536 GRIN2DO15399 1336 aa27.98■■■□□ 2.07
ATXN3-252ENST00000620536 MYL3P08590 195 aa27.98■■■□□ 2.07
ATXN3-252ENST00000620536 CSF2RAP15509 400 aa27.98■■■□□ 2.07
ATXN3-252ENST00000620536 NSUN6Q8TEA1 469 aaKnown RBP27.98■■■□□ 2.07
ATXN3-252ENST00000620536 TBC1D5Q92609 795 aa27.98■■■□□ 2.07
ATXN3-252ENST00000620536 GUCD1Q96NT3 240 aa27.98■■■□□ 2.07
ATXN3-252ENST00000620536 ERICH2A1L162 156 aa27.97■■■□□ 2.07
ATXN3-252ENST00000620536 KLRF2D3W0D1 207 aa27.97■■■□□ 2.07
ATXN3-252ENST00000620536 TXNP10599 105 aaKnown RBP27.97■■■□□ 2.07
ATXN3-252ENST00000620536 RALYLQ86SE5 291 aaKnown RBP27.97■■■□□ 2.07
ATXN3-252ENST00000620536 STAG2Q8N3U4 1231 aa27.97■■■□□ 2.07
ATXN3-252ENST00000620536 SYTL5Q8TDW5 730 aaPredicted RBP27.97■■■□□ 2.07
ATXN3-252ENST00000620536 BUD13Q9BRD0 619 aaKnown RBP eCLIP27.97■■■□□ 2.07
ATXN3-252ENST00000620536 HIPK3Q9H422 1215 aa27.97■■■□□ 2.07
ATXN3-252ENST00000620536 HSFX4A0A1B0GTS1 333 aaPredicted RBP27.96■■■□□ 2.07
ATXN3-252ENST00000620536 HSFX3A0A1B0GWH4 333 aaPredicted RBP27.96■■■□□ 2.07
ATXN3-252ENST00000620536 IFIT3O14879 490 aaKnown RBP27.96■■■□□ 2.07
ATXN3-252ENST00000620536 SGSM2O43147 1006 aa27.96■■■□□ 2.07
ATXN3-252ENST00000620536 CYP2C18P33260 490 aa27.96■■■□□ 2.07
ATXN3-252ENST00000620536 TTLL4Q14679 1199 aa27.96■■■□□ 2.07
ATXN3-252ENST00000620536 TAAR1Q96RJ0 339 aa27.96■■■□□ 2.07
ATXN3-252ENST00000620536 AMNQ9BXJ7 453 aa27.96■■■□□ 2.07
ATXN3-252ENST00000620536 TRPV6Q9H1D0 765 aa27.96■■■□□ 2.07
ATXN3-252ENST00000620536 SEMA6BQ9H3T3 888 aa27.96■■■□□ 2.07
ATXN3-252ENST00000620536 COL6A3P12111 3177 aa27.96■■■□□ 2.07
ATXN3-252ENST00000620536 PURAQ00577 322 aaKnown RBP27.95■■■□□ 2.06
ATXN3-252ENST00000620536 SART3Q15020 963 aaKnown RBP27.95■■■□□ 2.06
ATXN3-252ENST00000620536 NCOA7Q8NI08 942 aa27.95■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms