RNA–Protein interactions for RNA: ENST00000614502.4

PDLIM2-218, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-218ENST00000614502 CNNM2Q9H8M5 875 aa14.24□□□□□ -0.13
PDLIM2-218ENST00000614502 TMEM265A0A087WTH1 108 aa14.23□□□□□ -0.13
PDLIM2-218ENST00000614502 DYNC1LI2O43237 492 aaPredicted RBP14.23□□□□□ -0.13
PDLIM2-218ENST00000614502 FOSL2P15408 326 aa14.23□□□□□ -0.13
PDLIM2-218ENST00000614502 ALDH5A1P51649 535 aaPredicted RBP14.23□□□□□ -0.13
PDLIM2-218ENST00000614502 PPIGQ13427 754 aaKnown RBP eCLIP14.23□□□□□ -0.131e-8■■■□□ 18.4
PDLIM2-218ENST00000614502 BAATQ14032 418 aaPredicted RBP14.23□□□□□ -0.13
PDLIM2-218ENST00000614502 FSCN1Q16658 493 aaKnown RBP14.23□□□□□ -0.13
PDLIM2-218ENST00000614502 BRDTQ58F21 947 aaPredicted RBP14.23□□□□□ -0.13
PDLIM2-218ENST00000614502 RNF207Q6ZRF8 634 aa14.23□□□□□ -0.13
PDLIM2-218ENST00000614502 KIAA1211Q6ZU35 1233 aa14.23□□□□□ -0.13
PDLIM2-218ENST00000614502 TBC1D10CQ8IV04 446 aa14.23□□□□□ -0.13
PDLIM2-218ENST00000614502 TMEM199Q8N511 208 aa14.23□□□□□ -0.13
PDLIM2-218ENST00000614502 DNERQ8NFT8 737 aa14.23□□□□□ -0.13
PDLIM2-218ENST00000614502 TBX21Q9UL17 535 aa14.23□□□□□ -0.13
PDLIM2-218ENST00000614502 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.22□□□□□ -0.13
PDLIM2-218ENST00000614502 NKRFO15226 690 aaKnown RBP eCLIP14.22□□□□□ -0.13
PDLIM2-218ENST00000614502 SMPD1P17405 629 aa14.22□□□□□ -0.13
PDLIM2-218ENST00000614502 PTGS1P23219 599 aa14.22□□□□□ -0.13
PDLIM2-218ENST00000614502 DNAJB2P25686 324 aa14.22□□□□□ -0.13
PDLIM2-218ENST00000614502 GRIN2CQ14957 1233 aa14.22□□□□□ -0.13
PDLIM2-218ENST00000614502 ASPRV1Q53RT3 343 aa14.22□□□□□ -0.13
PDLIM2-218ENST00000614502 MFSD5Q6N075 450 aa14.22□□□□□ -0.13
PDLIM2-218ENST00000614502 TAPT1Q6NXT6 567 aa14.22□□□□□ -0.13
PDLIM2-218ENST00000614502 RASGRP2Q7LDG7 609 aa14.22□□□□□ -0.13
PDLIM2-218ENST00000614502 FBXO16Q8IX29 292 aaPredicted RBP14.22□□□□□ -0.13
PDLIM2-218ENST00000614502 FAM126BQ8IXS8 530 aa14.22□□□□□ -0.13
PDLIM2-218ENST00000614502 USP38Q8NB14 1042 aa14.22□□□□□ -0.13
PDLIM2-218ENST00000614502 PNMA1Q8ND90 353 aa14.22□□□□□ -0.13
PDLIM2-218ENST00000614502 RGS22Q8NE09 1264 aa14.22□□□□□ -0.13
PDLIM2-218ENST00000614502 RUFY2Q8WXA3 655 aa14.22□□□□□ -0.13
PDLIM2-218ENST00000614502 ANKS1AQ92625 1134 aa14.22□□□□□ -0.13
PDLIM2-218ENST00000614502 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.22□□□□□ -0.131e-6■■■■□ 19.3
PDLIM2-218ENST00000614502 POLR3EQ9NVU0 708 aa14.22□□□□□ -0.13
PDLIM2-218ENST00000614502 DDX49Q9Y6V7 483 aaKnown RBP14.22□□□□□ -0.13
PDLIM2-218ENST00000614502 CHD9Q3L8U1 2897 aa14.22□□□□□ -0.13
PDLIM2-218ENST00000614502 NEDD4P46934 1319 aa14.21□□□□□ -0.13
PDLIM2-218ENST00000614502 RAD50Q92878 1312 aa14.21□□□□□ -0.13
PDLIM2-218ENST00000614502 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.21□□□□□ -0.13
PDLIM2-218ENST00000614502 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.21□□□□□ -0.13
PDLIM2-218ENST00000614502 NFIBO00712 420 aa14.21□□□□□ -0.13
PDLIM2-218ENST00000614502 CTAGE5O15320 804 aa14.21□□□□□ -0.13
PDLIM2-218ENST00000614502 KDM4AO75164 1064 aa14.21□□□□□ -0.13
PDLIM2-218ENST00000614502 CPT1AP50416 773 aa14.21□□□□□ -0.13
PDLIM2-218ENST00000614502 BEX3Q00994 111 aa14.21□□□□□ -0.13
PDLIM2-218ENST00000614502 PDE4DQ08499 809 aa14.21□□□□□ -0.13
PDLIM2-218ENST00000614502 ITGA7Q13683 1181 aa14.21□□□□□ -0.13
PDLIM2-218ENST00000614502 DUSP28Q4G0W2 176 aa14.21□□□□□ -0.13
PDLIM2-218ENST00000614502 C16orf59Q7L2K0 433 aa14.21□□□□□ -0.13
PDLIM2-218ENST00000614502 EEPD1Q7L9B9 569 aa14.21□□□□□ -0.13
PDLIM2-218ENST00000614502 ZSCAN10Q96SZ4 725 aaPredicted RBP14.21□□□□□ -0.13
PDLIM2-218ENST00000614502 ZKSCAN3Q9BRR0 538 aa14.21□□□□□ -0.13
PDLIM2-218ENST00000614502 UBAC1Q9BSL1 405 aa14.21□□□□□ -0.13
PDLIM2-218ENST00000614502 ASTN1O14525 1302 aa14.2□□□□□ -0.14
PDLIM2-218ENST00000614502 ABCB11O95342 1321 aa14.2□□□□□ -0.14
PDLIM2-218ENST00000614502 RBM47A0AV96 593 aaKnown RBP14.2□□□□□ -0.14
PDLIM2-218ENST00000614502 GRXCR1A8MXD5 290 aa14.2□□□□□ -0.14
PDLIM2-218ENST00000614502 B4E1Z4 1266 aa14.2□□□□□ -0.14
PDLIM2-218ENST00000614502 CD4P01730 458 aa14.2□□□□□ -0.14
PDLIM2-218ENST00000614502 CENPBP07199 599 aaPredicted RBP14.2□□□□□ -0.14
PDLIM2-218ENST00000614502 CALML3P27482 149 aa14.2□□□□□ -0.14
PDLIM2-218ENST00000614502 PBX2P40425 430 aa14.2□□□□□ -0.14
PDLIM2-218ENST00000614502 CXCL17Q6UXB2 119 aa14.2□□□□□ -0.14
PDLIM2-218ENST00000614502 MCF2L2Q86YR7 1114 aa14.2□□□□□ -0.14
PDLIM2-218ENST00000614502 SLC43A3Q8NBI5 491 aa14.2□□□□□ -0.14
PDLIM2-218ENST00000614502 CLEC4DQ8WXI8 215 aa14.2□□□□□ -0.14
PDLIM2-218ENST00000614502 WDR11Q9BZH6 1224 aa14.2□□□□□ -0.14
PDLIM2-218ENST00000614502 MTIF3Q9H2K0 278 aaKnown RBP14.2□□□□□ -0.14
PDLIM2-218ENST00000614502 GPHNQ9NQX3 736 aaPredicted RBP14.2□□□□□ -0.14
PDLIM2-218ENST00000614502 PDGFCQ9NRA1 345 aa14.2□□□□□ -0.14
PDLIM2-218ENST00000614502 CHD7Q9P2D1 2997 aa14.19□□□□□ -0.14
PDLIM2-218ENST00000614502 KIAA1217Q5T5P2 1943 aa14.19□□□□□ -0.14
PDLIM2-218ENST00000614502 KPNA6O60684 536 aa14.19□□□□□ -0.14
PDLIM2-218ENST00000614502 PARP1P09874 1014 aaKnown RBP14.19□□□□□ -0.14
PDLIM2-218ENST00000614502 CSF2RAP15509 400 aa14.19□□□□□ -0.14
PDLIM2-218ENST00000614502 RPS6P62753 249 aaKnown RBP14.19□□□□□ -0.14
PDLIM2-218ENST00000614502 TRDNQ13061 729 aa14.19□□□□□ -0.14
PDLIM2-218ENST00000614502 TMEM240Q5SV17 173 aa14.19□□□□□ -0.14
PDLIM2-218ENST00000614502 PSRC1Q6PGN9 363 aaPredicted RBP14.19□□□□□ -0.14
PDLIM2-218ENST00000614502 SCFD2Q8WU76 684 aa14.19□□□□□ -0.14
PDLIM2-218ENST00000614502 PPP1R12CQ9BZL4 782 aa14.19□□□□□ -0.14
PDLIM2-218ENST00000614502 ZSWIM5Q9P217 1185 aa14.19□□□□□ -0.14
PDLIM2-218ENST00000614502 MUC3AQ02505 3323 aa14.18□□□□□ -0.14
PDLIM2-218ENST00000614502 TNKSO95271 1327 aa14.18□□□□□ -0.14
PDLIM2-218ENST00000614502 SUPT20HL2P0C7V6 817 aa14.18□□□□□ -0.14
PDLIM2-218ENST00000614502 ACRP10323 421 aa14.18□□□□□ -0.14
PDLIM2-218ENST00000614502 TRAF1Q13077 416 aa14.18□□□□□ -0.14
PDLIM2-218ENST00000614502 PPP2R5BQ15173 497 aa14.18□□□□□ -0.14
PDLIM2-218ENST00000614502 CDC37Q16543 378 aaPredicted RBP14.18□□□□□ -0.14
PDLIM2-218ENST00000614502 USH1GQ495M9 461 aa14.18□□□□□ -0.14
PDLIM2-218ENST00000614502 IFIT1BQ5T764 474 aaKnown RBP14.18□□□□□ -0.14
PDLIM2-218ENST00000614502 TTC22Q5TAA0 569 aa14.18□□□□□ -0.14
PDLIM2-218ENST00000614502 SLC30A10Q6XR72 485 aa14.18□□□□□ -0.14
PDLIM2-218ENST00000614502 ENAHQ8N8S7 591 aaPredicted RBP14.18□□□□□ -0.14
PDLIM2-218ENST00000614502 OR6J1Q8NGC5 347 aa14.18□□□□□ -0.14
PDLIM2-218ENST00000614502 TIFAQ96CG3 184 aa14.18□□□□□ -0.14
PDLIM2-218ENST00000614502 ZNF576Q9H609 170 aa14.18□□□□□ -0.14
PDLIM2-218ENST00000614502 PRDM6Q9NQX0 595 aa14.18□□□□□ -0.14
PDLIM2-218ENST00000614502 MRPL11Q9Y3B7 192 aaKnown RBP14.18□□□□□ -0.14
PDLIM2-218ENST00000614502 DHX16O60231 1041 aaKnown RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms