RNA–Protein interactions for RNA: ENST00000607520.1

SCARNA15-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 4,325 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15-201ENST00000607520 ZCCHC17Q9NP64 241 aaKnown RBP5.81□□□□□ -1.48
SCARNA15-201ENST00000607520 VPS54Q9P1Q0 977 aa5.81□□□□□ -1.48
SCARNA15-201ENST00000607520 SCN11AQ9UI33 1791 aa5.81□□□□□ -1.48
SCARNA15-201ENST00000607520 EVI5O60447 810 aa5.81□□□□□ -1.48
SCARNA15-201ENST00000607520 KIF4AO95239 1232 aa5.81□□□□□ -1.48
SCARNA15-201ENST00000607520 HMGCRP04035 888 aa5.81□□□□□ -1.48
SCARNA15-201ENST00000607520 TPM3P06753 285 aa5.81□□□□□ -1.48
SCARNA15-201ENST00000607520 AKR1A1P14550 325 aa5.81□□□□□ -1.48
SCARNA15-201ENST00000607520 CPA1P15085 419 aa5.81□□□□□ -1.48
SCARNA15-201ENST00000607520 GSPT1P15170 499 aaKnown RBP5.81□□□□□ -1.48
SCARNA15-201ENST00000607520 CCT6AP40227 531 aaKnown RBP5.81□□□□□ -1.48
SCARNA15-201ENST00000607520 TXKP42681 527 aa5.81□□□□□ -1.48
SCARNA15-201ENST00000607520 ATN1P54259 1190 aaPredicted RBP5.81□□□□□ -1.48
SCARNA15-201ENST00000607520 AP3B2Q13367 1082 aa5.81□□□□□ -1.48
SCARNA15-201ENST00000607520 CALCRLQ16602 461 aa5.81□□□□□ -1.48
SCARNA15-201ENST00000607520 PDXDC2PQ6P474 469 aa5.81□□□□□ -1.48
SCARNA15-201ENST00000607520 DIS3L2Q8IYB7 885 aaKnown RBP5.81□□□□□ -1.48
SCARNA15-201ENST00000607520 ZNF710Q8N1W2 664 aa5.81□□□□□ -1.48
SCARNA15-201ENST00000607520 ZNF577Q9BSK1 485 aa5.81□□□□□ -1.48
SCARNA15-201ENST00000607520 TSPY26PQ9H489 355 aa5.81□□□□□ -1.48
SCARNA15-201ENST00000607520 NCOA5Q9HCD5 579 aaKnown RBP5.81□□□□□ -1.48
SCARNA15-201ENST00000607520 STARD7Q9NQZ5 370 aa5.81□□□□□ -1.48
SCARNA15-201ENST00000607520 FBXO28Q9NVF7 368 aa5.81□□□□□ -1.48
SCARNA15-201ENST00000607520 RNF186Q9NXI6 227 aa5.81□□□□□ -1.48
SCARNA15-201ENST00000607520 C4AP0C0L4 1744 aa5.8□□□□□ -1.48
SCARNA15-201ENST00000607520 KPNA6O60684 536 aa5.8□□□□□ -1.48
SCARNA15-201ENST00000607520 LETM1O95202 739 aaPredicted RBP5.8□□□□□ -1.48
SCARNA15-201ENST00000607520 GCFC2P16383 781 aaKnown RBP5.8□□□□□ -1.48
SCARNA15-201ENST00000607520 HOXA13P31271 388 aaPredicted RBP5.8□□□□□ -1.48
SCARNA15-201ENST00000607520 ADD1P35611 737 aaKnown RBP5.8□□□□□ -1.48
SCARNA15-201ENST00000607520 MAP2K5Q13163 448 aa5.8□□□□□ -1.48
SCARNA15-201ENST00000607520 CRHR2Q13324 411 aa5.8□□□□□ -1.48
SCARNA15-201ENST00000607520 RILPL1Q5EBL4 403 aa5.8□□□□□ -1.48
SCARNA15-201ENST00000607520 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.8□□□□□ -1.48
SCARNA15-201ENST00000607520 HHIPL1Q96JK4 782 aa5.8□□□□□ -1.48
SCARNA15-201ENST00000607520 FAM167AQ96KS9 214 aa5.8□□□□□ -1.48
SCARNA15-201ENST00000607520 APBA2Q99767 749 aa5.8□□□□□ -1.48
SCARNA15-201ENST00000607520 TSG101Q99816 390 aa5.8□□□□□ -1.48
SCARNA15-201ENST00000607520 ADPGKQ9BRR6 497 aa5.8□□□□□ -1.48
SCARNA15-201ENST00000607520 ZMYM6O95789 1325 aa5.8□□□□□ -1.48
SCARNA15-201ENST00000607520 PSAPP07602 524 aa5.8□□□□□ -1.48
SCARNA15-201ENST00000607520 VASPP50552 380 aaPredicted RBP5.8□□□□□ -1.48
SCARNA15-201ENST00000607520 STRN3Q13033 797 aa5.8□□□□□ -1.48
SCARNA15-201ENST00000607520 TFDP1Q14186 410 aa5.8□□□□□ -1.48
SCARNA15-201ENST00000607520 SASS6Q6UVJ0 657 aa5.8□□□□□ -1.48
SCARNA15-201ENST00000607520 CMTR1Q8N1G2 835 aaKnown RBP5.8□□□□□ -1.48
SCARNA15-201ENST00000607520 ENAHQ8N8S7 591 aaPredicted RBP5.8□□□□□ -1.48
SCARNA15-201ENST00000607520 SPATA33Q96N06 139 aa5.8□□□□□ -1.48
SCARNA15-201ENST00000607520 DEFB118Q96PH6 123 aa5.8□□□□□ -1.48
SCARNA15-201ENST00000607520 SCAND2PQ9GZW5 306 aaPredicted RBP5.8□□□□□ -1.48
SCARNA15-201ENST00000607520 ABHD16BQ9H3Z7 469 aa5.8□□□□□ -1.48
SCARNA15-201ENST00000607520 AKT3Q9Y243 479 aa5.8□□□□□ -1.48
SCARNA15-201ENST00000607520 SH2B2O14492 632 aaPredicted RBP5.8□□□□□ -1.48
SCARNA15-201ENST00000607520 NMT2O60551 498 aa5.8□□□□□ -1.48
SCARNA15-201ENST00000607520 OFD1O75665 1012 aa5.8□□□□□ -1.48
SCARNA15-201ENST00000607520 FARP2O94887 1054 aaPredicted RBP5.8□□□□□ -1.48
SCARNA15-201ENST00000607520 XRCC6P12956 609 aaKnown RBP eCLIP5.8□□□□□ -1.48
SCARNA15-201ENST00000607520 ADORA2AP29274 412 aa5.8□□□□□ -1.48
SCARNA15-201ENST00000607520 SHMT1P34896 483 aa5.8□□□□□ -1.48
SCARNA15-201ENST00000607520 OAZ1P54368 228 aa5.8□□□□□ -1.48
SCARNA15-201ENST00000607520 GRM4Q14833 912 aa5.8□□□□□ -1.48
SCARNA15-201ENST00000607520 KLHL40Q2TBA0 621 aa5.8□□□□□ -1.48
SCARNA15-201ENST00000607520 XKR9Q5GH70 373 aa5.8□□□□□ -1.48
SCARNA15-201ENST00000607520 NOL9Q5SY16 702 aaKnown RBP5.8□□□□□ -1.48
SCARNA15-201ENST00000607520 LRCH2Q5VUJ6 765 aa5.8□□□□□ -1.48
SCARNA15-201ENST00000607520 FBXO46Q6PJ61 603 aaPredicted RBP5.8□□□□□ -1.48
SCARNA15-201ENST00000607520 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.8□□□□□ -1.48
SCARNA15-201ENST00000607520 CATSPERGQ6ZRH7 1159 aa5.8□□□□□ -1.48
SCARNA15-201ENST00000607520 NEK8Q86SG6 692 aa5.8□□□□□ -1.48
SCARNA15-201ENST00000607520 TBC1D10CQ8IV04 446 aa5.8□□□□□ -1.48
SCARNA15-201ENST00000607520 ADGRF4Q8IZF3 695 aa5.8□□□□□ -1.48
SCARNA15-201ENST00000607520 PAF1Q8N7H5 531 aa5.8□□□□□ -1.48
SCARNA15-201ENST00000607520 SLC7A3Q8WY07 619 aa5.8□□□□□ -1.48
SCARNA15-201ENST00000607520 INO80BQ9C086 356 aaPredicted RBP5.8□□□□□ -1.48
SCARNA15-201ENST00000607520 DACH1Q9UI36 760 aa5.8□□□□□ -1.48
SCARNA15-201ENST00000607520 SYNPO2Q9UMS6 1093 aa5.8□□□□□ -1.48
SCARNA15-201ENST00000607520 BRWD3Q6RI45 1802 aa5.8□□□□□ -1.48
SCARNA15-201ENST00000607520 CCDC169A6NNP5 214 aa5.8□□□□□ -1.48
SCARNA15-201ENST00000607520 ERLIN2O94905 339 aa5.8□□□□□ -1.48
SCARNA15-201ENST00000607520 EGFRP00533 1210 aa5.8□□□□□ -1.48
SCARNA15-201ENST00000607520 POLGP54098 1239 aaPredicted RBP5.8□□□□□ -1.48
SCARNA15-201ENST00000607520 FMR1Q06787 632 aaKnown RBP eCLIP5.8□□□□□ -1.48
SCARNA15-201ENST00000607520 SYCP1Q15431 976 aa5.8□□□□□ -1.48
SCARNA15-201ENST00000607520 ANO1Q5XXA6 986 aa5.8□□□□□ -1.48
SCARNA15-201ENST00000607520 BRAPQ7Z569 592 aa5.8□□□□□ -1.48
SCARNA15-201ENST00000607520 TPH2Q8IWU9 490 aa5.8□□□□□ -1.48
SCARNA15-201ENST00000607520 GMCL1Q96IK5 515 aa5.8□□□□□ -1.48
SCARNA15-201ENST00000607520 TMX3Q96JJ7 454 aa5.8□□□□□ -1.48
SCARNA15-201ENST00000607520 XPNPEP3Q9NQH7 507 aa5.8□□□□□ -1.48
SCARNA15-201ENST00000607520 PCDHA12Q9UN75 941 aa5.8□□□□□ -1.48
SCARNA15-201ENST00000607520 DNM3Q9UQ16 869 aa5.8□□□□□ -1.48
SCARNA15-201ENST00000607520 ICAM1P05362 532 aa5.79□□□□□ -1.48
SCARNA15-201ENST00000607520 SETQ01105 290 aaPredicted RBP5.79□□□□□ -1.48
SCARNA15-201ENST00000607520 TBC1D8BQ0IIM8 1120 aa5.79□□□□□ -1.48
SCARNA15-201ENST00000607520 CETN1Q12798 172 aa5.79□□□□□ -1.48
SCARNA15-201ENST00000607520 NFX1Q12986 1120 aaKnown RBP5.79□□□□□ -1.48
SCARNA15-201ENST00000607520 BFSP2Q13515 415 aa5.79□□□□□ -1.48
SCARNA15-201ENST00000607520 MTMR1Q13613 665 aa5.79□□□□□ -1.48
SCARNA15-201ENST00000607520 PPP1R18Q6NYC8 613 aa5.79□□□□□ -1.48
SCARNA15-201ENST00000607520 SAMD3Q8N6K7 520 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms