RNA–Protein interactions for RNA: ENST00000607187.1

CTSA-215, Transcript of cathepsin A, human

TSL 2

Gene CTSA, Length 509 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSA-215	ENST00000607187	TAL1	P17542	331 aa	Predicted RBP	11.65	□□□□□ -0.54
CTSA-215	ENST00000607187	ANTXR2	P58335	489 aa		11.65	□□□□□ -0.54
CTSA-215	ENST00000607187	IRX5	P78411	483 aa	Predicted RBP	11.65	□□□□□ -0.54
CTSA-215	ENST00000607187	SART3	Q15020	963 aa	Known RBP	11.65	□□□□□ -0.54
CTSA-215	ENST00000607187	CREB3L3	Q68CJ9	461 aa		11.65	□□□□□ -0.54
CTSA-215	ENST00000607187	CHST3	Q7LGC8	479 aa		11.65	□□□□□ -0.54
CTSA-215	ENST00000607187	IGDCC4	Q8TDY8	1250 aa		11.65	□□□□□ -0.54
CTSA-215	ENST00000607187	UBA5	Q9GZZ9	404 aa		11.65	□□□□□ -0.54
CTSA-215	ENST00000607187	CPVL	Q9H3G5	476 aa		11.65	□□□□□ -0.54
CTSA-215	ENST00000607187	SENP2	Q9HC62	589 aa		11.65	□□□□□ -0.54
CTSA-215	ENST00000607187	PPP4R2	Q9NY27	417 aa		11.65	□□□□□ -0.54
CTSA-215	ENST00000607187	WDR19	Q8NEZ3	1342 aa		11.64	□□□□□ -0.55
CTSA-215	ENST00000607187	ERICH2	A1L162	156 aa		11.64	□□□□□ -0.55
CTSA-215	ENST00000607187	POTEB2	H3BUK9	544 aa		11.64	□□□□□ -0.55
CTSA-215	ENST00000607187	ZNF865	P0CJ78	1059 aa	Predicted RBP	11.64	□□□□□ -0.55
CTSA-215	ENST00000607187	COL6A1	P12109	1028 aa		11.64	□□□□□ -0.55
CTSA-215	ENST00000607187	MDM2	Q00987	491 aa	Predicted RBP	11.64	□□□□□ -0.55
CTSA-215	ENST00000607187	CNTN2	Q02246	1040 aa		11.64	□□□□□ -0.55
CTSA-215	ENST00000607187	WTAP	Q15007	396 aa		11.64	□□□□□ -0.55
CTSA-215	ENST00000607187	ADGRF4	Q8IZF3	695 aa		11.64	□□□□□ -0.55
CTSA-215	ENST00000607187	STAG2	Q8N3U4	1231 aa		11.64	□□□□□ -0.55
CTSA-215	ENST00000607187	CLEC4D	Q8WXI8	215 aa		11.64	□□□□□ -0.55
CTSA-215	ENST00000607187	DPF3	Q92784	378 aa		11.64	□□□□□ -0.55
CTSA-215	ENST00000607187	MTA3	Q9BTC8	594 aa		11.64	□□□□□ -0.55
CTSA-215	ENST00000607187	OCEL1	Q9H607	264 aa		11.64	□□□□□ -0.55
CTSA-215	ENST00000607187	CYP39A1	Q9NYL5	469 aa		11.64	□□□□□ -0.55
CTSA-215	ENST00000607187	CNPY2	Q9Y2B0	182 aa		11.64	□□□□□ -0.55
CTSA-215	ENST00000607187	LRRC37A2	A6NM11	1700 aa		11.63	□□□□□ -0.55
CTSA-215	ENST00000607187	PALM3	A6NDB9	673 aa	Predicted RBP	11.63	□□□□□ -0.55
CTSA-215	ENST00000607187	SOWAHB	A6NEL2	793 aa		11.63	□□□□□ -0.55
CTSA-215	ENST00000607187	DNM1L	O00429	736 aa		11.63	□□□□□ -0.55
CTSA-215	ENST00000607187	NFIB	O00712	420 aa		11.63	□□□□□ -0.55
CTSA-215	ENST00000607187	AKR1A1	P14550	325 aa		11.63	□□□□□ -0.55
CTSA-215	ENST00000607187	MCM5	P33992	734 aa		11.63	□□□□□ -0.55
CTSA-215	ENST00000607187	TROAP	Q12815	778 aa		11.63	□□□□□ -0.55
CTSA-215	ENST00000607187	CDC37	Q16543	378 aa	Predicted RBP	11.63	□□□□□ -0.55
CTSA-215	ENST00000607187	TMEM67	Q5HYA8	995 aa		11.63	□□□□□ -0.55
CTSA-215	ENST00000607187	RNF20	Q5VTR2	975 aa		11.63	□□□□□ -0.55
CTSA-215	ENST00000607187	ANO1	Q5XXA6	986 aa		11.63	□□□□□ -0.55
CTSA-215	ENST00000607187	ARMCX2	Q7L311	632 aa		11.63	□□□□□ -0.55
CTSA-215	ENST00000607187	CCDC144CP	Q8IYA2	1237 aa		11.63	□□□□□ -0.55
CTSA-215	ENST00000607187	POM121	Q96HA1	1249 aa		11.63	□□□□□ -0.55
CTSA-215	ENST00000607187	ABHD16B	Q9H3Z7	469 aa		11.63	□□□□□ -0.55
CTSA-215	ENST00000607187	C11orf49	Q9H6J7	331 aa		11.63	□□□□□ -0.55
CTSA-215	ENST00000607187	JMJD4	Q9H9V9	463 aa		11.63	□□□□□ -0.55
CTSA-215	ENST00000607187	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	11.63	□□□□□ -0.55
CTSA-215	ENST00000607187	MAD2L2	Q9UI95	211 aa		11.63	□□□□□ -0.55
CTSA-215	ENST00000607187	ASTN1	O14525	1302 aa		11.62	□□□□□ -0.55
CTSA-215	ENST00000607187	LAMA3	Q16787	3333 aa		11.62	□□□□□ -0.55
CTSA-215	ENST00000607187	KLRF2	D3W0D1	207 aa		11.62	□□□□□ -0.55
CTSA-215	ENST00000607187	GALR2	O43603	387 aa	Predicted RBP	11.62	□□□□□ -0.55
CTSA-215	ENST00000607187	SSTR3	P32745	418 aa	Predicted RBP	11.62	□□□□□ -0.55
CTSA-215	ENST00000607187	ACVR2B	Q13705	512 aa		11.62	□□□□□ -0.55
CTSA-215	ENST00000607187	BAAT	Q14032	418 aa	Predicted RBP	11.62	□□□□□ -0.55
CTSA-215	ENST00000607187	COL9A3	Q14050	684 aa	Predicted RBP	11.62	□□□□□ -0.55
CTSA-215	ENST00000607187	GRM4	Q14833	912 aa		11.62	□□□□□ -0.55
CTSA-215	ENST00000607187	TSGA10IP	Q3SY00	556 aa		11.62	□□□□□ -0.55
CTSA-215	ENST00000607187	TMEM92	Q6UXU6	159 aa		11.62	□□□□□ -0.55
CTSA-215	ENST00000607187	NSMF	Q6X4W1	530 aa		11.62	□□□□□ -0.55
CTSA-215	ENST00000607187	ARRDC4	Q8NCT1	418 aa		11.62	□□□□□ -0.55
CTSA-215	ENST00000607187	MTMR8	Q96EF0	704 aa		11.62	□□□□□ -0.55
CTSA-215	ENST00000607187	KATNBL1	Q9H079	304 aa		11.62	□□□□□ -0.55
CTSA-215	ENST00000607187	CDHR5	Q9HBB8	845 aa		11.62	□□□□□ -0.55
CTSA-215	ENST00000607187	LY9	Q9HBG7	655 aa		11.62	□□□□□ -0.55
CTSA-215	ENST00000607187	TRIOBP	Q9H2D6	2365 aa		11.62	□□□□□ -0.55
CTSA-215	ENST00000607187	PTPDC1	A2A3K4	754 aa		11.61	□□□□□ -0.55
CTSA-215	ENST00000607187	ASB14	A6NK59	587 aa		11.61	□□□□□ -0.55
CTSA-215	ENST00000607187		H0YGN5	161 aa		11.61	□□□□□ -0.55
CTSA-215	ENST00000607187	PRC1	O43663	620 aa		11.61	□□□□□ -0.55
CTSA-215	ENST00000607187	RARB	P10826	455 aa		11.61	□□□□□ -0.55
CTSA-215	ENST00000607187	QRICH1	Q2TAL8	776 aa		11.61	□□□□□ -0.55
CTSA-215	ENST00000607187	USH1G	Q495M9	461 aa		11.61	□□□□□ -0.55
CTSA-215	ENST00000607187	GJC2	Q5T442	439 aa	Predicted RBP	11.61	□□□□□ -0.55
CTSA-215	ENST00000607187	RNF207	Q6ZRF8	634 aa		11.61	□□□□□ -0.55
CTSA-215	ENST00000607187	CATIP	Q7Z7H3	387 aa		11.61	□□□□□ -0.55
CTSA-215	ENST00000607187	TMTC2	Q8N394	836 aa		11.61	□□□□□ -0.55
CTSA-215	ENST00000607187	RGS22	Q8NE09	1264 aa		11.61	□□□□□ -0.55
CTSA-215	ENST00000607187	MORC4	Q8TE76	937 aa		11.61	□□□□□ -0.55
CTSA-215	ENST00000607187	TMEM87B	Q96K49	555 aa		11.61	□□□□□ -0.55
CTSA-215	ENST00000607187	PURB	Q96QR8	312 aa	Known RBP	11.61	□□□□□ -0.55
CTSA-215	ENST00000607187	MAF1	Q9H063	256 aa		11.61	□□□□□ -0.55
CTSA-215	ENST00000607187	VAT1L	Q9HCJ6	419 aa		11.61	□□□□□ -0.55
CTSA-215	ENST00000607187	NPDC1	Q9NQX5	325 aa	Predicted RBP	11.61	□□□□□ -0.55
CTSA-215	ENST00000607187	ZHX1	Q9UKY1	873 aa	Predicted RBP	11.61	□□□□□ -0.55
CTSA-215	ENST00000607187	FAM184B	Q9ULE4	1060 aa		11.61	□□□□□ -0.55
CTSA-215	ENST00000607187	LAMA2	P24043	3122 aa	Known RBP	11.61	□□□□□ -0.55
CTSA-215	ENST00000607187	ABCB11	O95342	1321 aa		11.6	□□□□□ -0.55
CTSA-215	ENST00000607187	LOC102724159	A0A0B4J2E5	919 aa		11.6	□□□□□ -0.55
CTSA-215	ENST00000607187	SH2B2	O14492	632 aa	Predicted RBP	11.6	□□□□□ -0.55
CTSA-215	ENST00000607187	ADCY6	O43306	1168 aa		11.6	□□□□□ -0.55
CTSA-215	ENST00000607187	DHX16	O60231	1041 aa	Known RBP	11.6	□□□□□ -0.55
CTSA-215	ENST00000607187	DDAH1	O94760	285 aa		11.6	□□□□□ -0.55
CTSA-215	ENST00000607187	LIFR	P42702	1097 aa		11.6	□□□□□ -0.55
CTSA-215	ENST00000607187	RPS6	P62753	249 aa	Known RBP	11.6	□□□□□ -0.55
CTSA-215	ENST00000607187	PWP2	Q15269	919 aa	Known RBP	11.6	□□□□□ -0.55
CTSA-215	ENST00000607187	LRRC41	Q15345	812 aa		11.6	□□□□□ -0.55
CTSA-215	ENST00000607187	SLC35G1	Q2M3R5	365 aa		11.6	□□□□□ -0.55
CTSA-215	ENST00000607187	CCDC144B	Q3MJ40	725 aa		11.6	□□□□□ -0.55
CTSA-215	ENST00000607187	FBXO11	Q86XK2	927 aa		11.6	□□□□□ -0.55
CTSA-215	ENST00000607187	ZNF654	Q8IZM8	581 aa		11.6	□□□□□ -0.55

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