RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 PRC1O43663 620 aa12.46□□□□□ -0.41
TUBE1-210ENST00000604967 RXRAP19793 462 aa12.46□□□□□ -0.41
TUBE1-210ENST00000604967 GJA9P57773 515 aa12.46□□□□□ -0.41
TUBE1-210ENST00000604967 NKX3-2P78367 333 aa12.46□□□□□ -0.41
TUBE1-210ENST00000604967 KCNA10Q16322 511 aa12.46□□□□□ -0.41
TUBE1-210ENST00000604967 SYTL5Q8TDW5 730 aaPredicted RBP12.46□□□□□ -0.41
TUBE1-210ENST00000604967 TRIM43Q96BQ3 446 aaPredicted RBP12.46□□□□□ -0.41
TUBE1-210ENST00000604967 TCEANC2Q96MN5 208 aa12.46□□□□□ -0.41
TUBE1-210ENST00000604967 TAAR1Q96RJ0 339 aa12.46□□□□□ -0.41
TUBE1-210ENST00000604967 PIGSQ96S52 555 aa12.46□□□□□ -0.41
TUBE1-210ENST00000604967 RIOX1Q9H6W3 641 aa12.46□□□□□ -0.41
TUBE1-210ENST00000604967 BAZ2BQ9UIF8 2168 aaKnown RBP12.46□□□□□ -0.42
TUBE1-210ENST00000604967 LTBP2Q14767 1821 aa12.46□□□□□ -0.42
TUBE1-210ENST00000604967 KBTBD13C9JR72 458 aa12.45□□□□□ -0.42
TUBE1-210ENST00000604967 CDC45O75419 566 aa12.45□□□□□ -0.42
TUBE1-210ENST00000604967 ARIH2O95376 493 aa12.45□□□□□ -0.42
TUBE1-210ENST00000604967 PLEKHA8P1O95397 391 aa12.45□□□□□ -0.42
TUBE1-210ENST00000604967 CPA1P15085 419 aa12.45□□□□□ -0.42
TUBE1-210ENST00000604967 CST5P28325 142 aaPredicted RBP12.45□□□□□ -0.42
TUBE1-210ENST00000604967 ACLYP53396 1101 aa12.45□□□□□ -0.42
TUBE1-210ENST00000604967 EXOSC10Q01780 885 aaKnown RBP12.45□□□□□ -0.42
TUBE1-210ENST00000604967 WTAPQ15007 396 aa12.45□□□□□ -0.42
TUBE1-210ENST00000604967 RNF207Q6ZRF8 634 aa12.45□□□□□ -0.42
TUBE1-210ENST00000604967 RALYLQ86SE5 291 aaKnown RBP12.45□□□□□ -0.42
TUBE1-210ENST00000604967 CMTR1Q8N1G2 835 aaKnown RBP12.45□□□□□ -0.42
TUBE1-210ENST00000604967 ATP11BQ9Y2G3 1177 aa12.45□□□□□ -0.42
TUBE1-210ENST00000604967 RBM47A0AV96 593 aaKnown RBP12.44□□□□□ -0.42
TUBE1-210ENST00000604967 ASB14A6NK59 587 aa12.44□□□□□ -0.42
TUBE1-210ENST00000604967 MDM2Q00987 491 aaPredicted RBP12.44□□□□□ -0.42
TUBE1-210ENST00000604967 TNFAIP2Q03169 654 aa12.44□□□□□ -0.42
TUBE1-210ENST00000604967 TLE2Q04725 743 aa12.44□□□□□ -0.42
TUBE1-210ENST00000604967 TRDNQ13061 729 aa12.44□□□□□ -0.42
TUBE1-210ENST00000604967 C1orf53Q5VUE5 145 aa12.44□□□□□ -0.42
TUBE1-210ENST00000604967 ZNF654Q8IZM8 581 aa12.44□□□□□ -0.42
TUBE1-210ENST00000604967 RGS22Q8NE09 1264 aa12.44□□□□□ -0.42
TUBE1-210ENST00000604967 COPS5Q92905 334 aa12.44□□□□□ -0.42
TUBE1-210ENST00000604967 KCNB2Q92953 911 aa12.44□□□□□ -0.42
TUBE1-210ENST00000604967 PDLIM7Q9NR12 457 aa12.44□□□□□ -0.42
TUBE1-210ENST00000604967 ABCB11O95342 1321 aa12.43□□□□□ -0.42
TUBE1-210ENST00000604967 ZBTB5O15062 677 aa12.43□□□□□ -0.42
TUBE1-210ENST00000604967 ASGR1P07306 291 aa12.43□□□□□ -0.42
TUBE1-210ENST00000604967 C6orf222P0C671 652 aaPredicted RBP12.43□□□□□ -0.42
TUBE1-210ENST00000604967 CDK7P50613 346 aa12.43□□□□□ -0.42
TUBE1-210ENST00000604967 GHRHRQ02643 423 aa12.43□□□□□ -0.42
TUBE1-210ENST00000604967 KIAA1211Q6ZU35 1233 aa12.43□□□□□ -0.42
TUBE1-210ENST00000604967 RNF180Q86T96 592 aa12.43□□□□□ -0.42
TUBE1-210ENST00000604967 FBXO11Q86XK2 927 aa12.43□□□□□ -0.42
TUBE1-210ENST00000604967 SRBD1Q8N5C6 995 aaKnown RBP12.43□□□□□ -0.42
TUBE1-210ENST00000604967 IL31RAQ8NI17 732 aa12.43□□□□□ -0.42
TUBE1-210ENST00000604967 PPP1R13LQ8WUF5 828 aa12.43□□□□□ -0.42
TUBE1-210ENST00000604967 PIBF1Q8WXW3 757 aa12.43□□□□□ -0.42
TUBE1-210ENST00000604967 TSEN34Q9BSV6 310 aaKnown RBP12.43□□□□□ -0.42
TUBE1-210ENST00000604967 BRPF3Q9ULD4 1205 aa12.43□□□□□ -0.42
TUBE1-210ENST00000604967 hCG_1642624A0A1W2PR95 340 aa12.42□□□□□ -0.42
TUBE1-210ENST00000604967 RGS20O76081 388 aa12.42□□□□□ -0.42
TUBE1-210ENST00000604967 HOXA13P31271 388 aaPredicted RBP12.42□□□□□ -0.42
TUBE1-210ENST00000604967 BMP8BP34820 402 aa12.42□□□□□ -0.42
TUBE1-210ENST00000604967 HSD17B4P51659 736 aa12.42□□□□□ -0.42
TUBE1-210ENST00000604967 EPHB4P54760 987 aa12.42□□□□□ -0.42
TUBE1-210ENST00000604967 FAAP100Q0VG06 881 aa12.42□□□□□ -0.42
TUBE1-210ENST00000604967 FUT2Q10981 343 aa12.42□□□□□ -0.42
TUBE1-210ENST00000604967 TSGA10IPQ3SY00 556 aa12.42□□□□□ -0.42
TUBE1-210ENST00000604967 DUSP28Q4G0W2 176 aa12.42□□□□□ -0.42
TUBE1-210ENST00000604967 GNASQ5JWF2 1037 aa12.42□□□□□ -0.42
TUBE1-210ENST00000604967 CXCL17Q6UXB2 119 aa12.42□□□□□ -0.42
TUBE1-210ENST00000604967 TLK2Q86UE8 772 aa12.42□□□□□ -0.42
TUBE1-210ENST00000604967 HOMER1Q86YM7 354 aa12.42□□□□□ -0.42
TUBE1-210ENST00000604967 LRCH3Q96II8 777 aa12.42□□□□□ -0.42
TUBE1-210ENST00000604967 ZFP91Q96JP5 570 aaPredicted RBP12.42□□□□□ -0.42
TUBE1-210ENST00000604967 VTA1Q9NP79 307 aa12.42□□□□□ -0.42
TUBE1-210ENST00000604967 FAM217BQ9NTX9 383 aaPredicted RBP12.42□□□□□ -0.42
TUBE1-210ENST00000604967 DYNC1LI2O43237 492 aaPredicted RBP12.41□□□□□ -0.42
TUBE1-210ENST00000604967 DHX16O60231 1041 aaKnown RBP12.41□□□□□ -0.42
TUBE1-210ENST00000604967 PQBP1O60828 265 aaKnown RBP12.41□□□□□ -0.42
TUBE1-210ENST00000604967 MCM5P33992 734 aa12.41□□□□□ -0.42
TUBE1-210ENST00000604967 IQSEC1Q6DN90 963 aa12.41□□□□□ -0.42
TUBE1-210ENST00000604967 CCDC62Q6P9F0 684 aa12.41□□□□□ -0.42
TUBE1-210ENST00000604967 SLC43A3Q8NBI5 491 aa12.41□□□□□ -0.42
TUBE1-210ENST00000604967 NUP133Q8WUM0 1156 aa12.41□□□□□ -0.42
TUBE1-210ENST00000604967 GPKOWQ92917 476 aaPredicted RBP eCLIP12.41□□□□□ -0.426e-6■■□□□ 12
TUBE1-210ENST00000604967 AMNQ9BXJ7 453 aa12.41□□□□□ -0.42
TUBE1-210ENST00000604967 WDR11Q9BZH6 1224 aa12.41□□□□□ -0.42
TUBE1-210ENST00000604967 BCAS3Q9H6U6 928 aa12.41□□□□□ -0.42
TUBE1-210ENST00000604967 PCDHA1Q9Y5I3 950 aa12.41□□□□□ -0.42
TUBE1-210ENST00000604967 MYH6P13533 1939 aa12.41□□□□□ -0.42
TUBE1-210ENST00000604967 DDAH1O94760 285 aa12.4□□□□□ -0.42
TUBE1-210ENST00000604967 CFBP00751 764 aa12.4□□□□□ -0.42
TUBE1-210ENST00000604967 EIF2AK2P19525 551 aaKnown RBP12.4□□□□□ -0.42
TUBE1-210ENST00000604967 LIFRP42702 1097 aa12.4□□□□□ -0.42
TUBE1-210ENST00000604967 PSMC6P62333 389 aa12.4□□□□□ -0.42
TUBE1-210ENST00000604967 FSCN1Q16658 493 aaKnown RBP12.4□□□□□ -0.42
TUBE1-210ENST00000604967 ANKRD33Q7Z3H0 272 aa12.4□□□□□ -0.42
TUBE1-210ENST00000604967 CATIPQ7Z7H3 387 aa12.4□□□□□ -0.42
TUBE1-210ENST00000604967 SGMS1Q86VZ5 419 aa12.4□□□□□ -0.42
TUBE1-210ENST00000604967 DNERQ8NFT8 737 aa12.4□□□□□ -0.42
TUBE1-210ENST00000604967 MAP3K14Q99558 947 aa12.4□□□□□ -0.42
TUBE1-210ENST00000604967 MTA3Q9BTC8 594 aa12.4□□□□□ -0.42
TUBE1-210ENST00000604967 SPZ1Q9BXG8 430 aa12.4□□□□□ -0.42
TUBE1-210ENST00000604967 ADD3Q9UEY8 706 aaKnown RBP12.4□□□□□ -0.42
TUBE1-210ENST00000604967 TBX21Q9UL17 535 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms