RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 NEMFO60524 1076 aa5.27□□□□□ -1.57
LINC01109-201ENST00000603837 SASH1O94885 1247 aa5.27□□□□□ -1.57
LINC01109-201ENST00000603837 SERPINB3P29508 390 aa5.27□□□□□ -1.57
LINC01109-201ENST00000603837 FANCCQ00597 558 aa5.27□□□□□ -1.57
LINC01109-201ENST00000603837 MLLT1Q03111 559 aaPredicted RBP5.27□□□□□ -1.57
LINC01109-201ENST00000603837 SNW1Q13573 536 aaKnown RBP5.27□□□□□ -1.57
LINC01109-201ENST00000603837 MRPL58Q14197 206 aaKnown RBP5.27□□□□□ -1.57
LINC01109-201ENST00000603837 MYBPC3Q14896 1274 aa5.27□□□□□ -1.57
LINC01109-201ENST00000603837 SKIDA1Q1XH10 827 aa5.27□□□□□ -1.57
LINC01109-201ENST00000603837 THEMIS2Q5TEJ8 643 aa5.27□□□□□ -1.57
LINC01109-201ENST00000603837 SFMBT2Q5VUG0 894 aa5.27□□□□□ -1.57
LINC01109-201ENST00000603837 ARHGAP22Q7Z5H3 698 aa5.27□□□□□ -1.57
LINC01109-201ENST00000603837 TMCO5AQ8N6Q1 288 aa5.27□□□□□ -1.57
LINC01109-201ENST00000603837 CEP112Q8N8E3 955 aa5.27□□□□□ -1.57
LINC01109-201ENST00000603837 OR8K1Q8NGG5 319 aa5.27□□□□□ -1.57
LINC01109-201ENST00000603837 ANKRD49Q8WVL7 239 aa5.27□□□□□ -1.57
LINC01109-201ENST00000603837 LMBR1Q8WVP7 490 aa5.27□□□□□ -1.57
LINC01109-201ENST00000603837 RPGRQ92834 1020 aaKnown RBP5.27□□□□□ -1.57
LINC01109-201ENST00000603837 GSDMAQ96QA5 445 aa5.27□□□□□ -1.57
LINC01109-201ENST00000603837 UTP14AQ9BVJ6 771 aaKnown RBP5.27□□□□□ -1.57
LINC01109-201ENST00000603837 TRIM4Q9C037 500 aa5.27□□□□□ -1.57
LINC01109-201ENST00000603837 PHACTR1Q9C0D0 580 aa5.27□□□□□ -1.57
LINC01109-201ENST00000603837 C12orf49Q9H741 205 aa5.27□□□□□ -1.57
LINC01109-201ENST00000603837 CNNM2Q9H8M5 875 aa5.27□□□□□ -1.57
LINC01109-201ENST00000603837 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.27□□□□□ -1.57
LINC01109-201ENST00000603837 NRXN1Q9ULB1 1477 aa5.27□□□□□ -1.57
LINC01109-201ENST00000603837 EBAG9O00559 213 aa5.26□□□□□ -1.57
LINC01109-201ENST00000603837 ATP6V1G1O75348 118 aa5.26□□□□□ -1.57
LINC01109-201ENST00000603837 KRT10P13645 584 aa5.26□□□□□ -1.57
LINC01109-201ENST00000603837 SOX11P35716 441 aa5.26□□□□□ -1.57
LINC01109-201ENST00000603837 MASP1P48740 699 aa5.26□□□□□ -1.57
LINC01109-201ENST00000603837 CEBPAP49715 358 aaPredicted RBP5.26□□□□□ -1.57
LINC01109-201ENST00000603837 RAB15P59190 212 aa5.26□□□□□ -1.57
LINC01109-201ENST00000603837 LMNB2Q03252 620 aa5.26□□□□□ -1.57
LINC01109-201ENST00000603837 APOBRQ0VD83 1088 aa5.26□□□□□ -1.57
LINC01109-201ENST00000603837 NNTQ13423 1086 aa5.26□□□□□ -1.57
LINC01109-201ENST00000603837 LRRC23Q53EV4 343 aaPredicted RBP5.26□□□□□ -1.57
LINC01109-201ENST00000603837 CEP85LQ5SZL2 805 aa5.26□□□□□ -1.57
LINC01109-201ENST00000603837 MICALCLQ6ZW33 695 aa5.26□□□□□ -1.57
LINC01109-201ENST00000603837 CEP57Q86XR8 500 aa5.26□□□□□ -1.57
LINC01109-201ENST00000603837 FAM114A1Q8IWE2 563 aa5.26□□□□□ -1.57
LINC01109-201ENST00000603837 C7orf57Q8NEG2 295 aa5.26□□□□□ -1.57
LINC01109-201ENST00000603837 ATP6V1E2Q96A05 226 aa5.26□□□□□ -1.57
LINC01109-201ENST00000603837 JAKMIP2Q96AA8 810 aa5.26□□□□□ -1.57
LINC01109-201ENST00000603837 CLIP3Q96DZ5 547 aa5.26□□□□□ -1.57
LINC01109-201ENST00000603837 SETDB2Q96T68 719 aa5.26□□□□□ -1.57
LINC01109-201ENST00000603837 CARD11Q9BXL7 1154 aa5.26□□□□□ -1.57
LINC01109-201ENST00000603837 TRIM5Q9C035 493 aa5.26□□□□□ -1.57
LINC01109-201ENST00000603837 ESF1Q9H501 851 aaKnown RBP5.26□□□□□ -1.57
LINC01109-201ENST00000603837 PDE11AQ9HCR9 933 aa5.26□□□□□ -1.57
LINC01109-201ENST00000603837 BATF3Q9NR55 127 aa5.26□□□□□ -1.57
LINC01109-201ENST00000603837 SPDYE3A6NKU9 549 aa5.26□□□□□ -1.57
LINC01109-201ENST00000603837 MYO1FO00160 1098 aa5.26□□□□□ -1.57
LINC01109-201ENST00000603837 EIF3FO00303 357 aaPredicted RBP5.26□□□□□ -1.57
LINC01109-201ENST00000603837 CHL1O00533 1208 aa5.26□□□□□ -1.57
LINC01109-201ENST00000603837 AHCYL1O43865 530 aa5.26□□□□□ -1.57
LINC01109-201ENST00000603837 TADA3O75528 432 aa5.26□□□□□ -1.57
LINC01109-201ENST00000603837 PGRP06401 933 aa5.26□□□□□ -1.57
LINC01109-201ENST00000603837 HALP42357 657 aa5.26□□□□□ -1.57
LINC01109-201ENST00000603837 MAGEA10P43363 369 aaPredicted RBP5.26□□□□□ -1.57
LINC01109-201ENST00000603837 ZNF75DP51815 510 aa5.26□□□□□ -1.57
LINC01109-201ENST00000603837 EVCP57679 992 aa5.26□□□□□ -1.57
LINC01109-201ENST00000603837 ACTN3Q08043 901 aaPredicted RBP5.26□□□□□ -1.57
LINC01109-201ENST00000603837 NFE2Q16621 373 aaPredicted RBP5.26□□□□□ -1.57
LINC01109-201ENST00000603837 CWF19L1Q69YN2 538 aaKnown RBP5.26□□□□□ -1.57
LINC01109-201ENST00000603837 IQCEQ6IPM2 695 aa5.26□□□□□ -1.57
LINC01109-201ENST00000603837 SLC30A9Q6PML9 568 aa5.26□□□□□ -1.57
LINC01109-201ENST00000603837 PACS1Q6VY07 963 aa5.26□□□□□ -1.57
LINC01109-201ENST00000603837 CCAR2Q8N163 923 aaKnown RBP5.26□□□□□ -1.57
LINC01109-201ENST00000603837 MIPOL1Q8TD10 442 aa5.26□□□□□ -1.57
LINC01109-201ENST00000603837 BHMTQ93088 406 aa5.26□□□□□ -1.57
LINC01109-201ENST00000603837 FUCA2Q9BTY2 467 aa5.26□□□□□ -1.57
LINC01109-201ENST00000603837 EPB41L4AQ9HCS5 686 aaPredicted RBP5.26□□□□□ -1.57
LINC01109-201ENST00000603837 ZNF304Q9HCX3 659 aa5.26□□□□□ -1.57
LINC01109-201ENST00000603837 HPS4Q9NQG7 708 aa5.26□□□□□ -1.57
LINC01109-201ENST00000603837 EIF2B4Q9UI10 523 aaKnown RBP5.26□□□□□ -1.57
LINC01109-201ENST00000603837 TPCN1Q9ULQ1 816 aa5.26□□□□□ -1.57
LINC01109-201ENST00000603837 FAM50BQ9Y247 325 aa5.26□□□□□ -1.57
LINC01109-201ENST00000603837 PIK3C2GO75747 1445 aa5.26□□□□□ -1.57
LINC01109-201ENST00000603837 A6NJY4 79 aa5.25□□□□□ -1.57
LINC01109-201ENST00000603837 EFCAB8A8MWE9 144 aa5.25□□□□□ -1.57
LINC01109-201ENST00000603837 OPA1O60313 960 aa5.25□□□□□ -1.57
LINC01109-201ENST00000603837 MAPK1P28482 360 aa5.25□□□□□ -1.57
LINC01109-201ENST00000603837 KIF5BP33176 963 aa5.25□□□□□ -1.57
LINC01109-201ENST00000603837 MATR3P43243 847 aaKnown RBP eCLIP5.25□□□□□ -1.57
LINC01109-201ENST00000603837 SMAD4Q13485 552 aaKnown RBP5.25□□□□□ -1.57
LINC01109-201ENST00000603837 ISM2Q6H9L7 571 aa5.25□□□□□ -1.57
LINC01109-201ENST00000603837 CAPRIN2Q6IMN6 1127 aaKnown RBP5.25□□□□□ -1.57
LINC01109-201ENST00000603837 TLDC1Q6P9B6 456 aa5.25□□□□□ -1.57
LINC01109-201ENST00000603837 CYP26C1Q6V0L0 522 aa5.25□□□□□ -1.57
LINC01109-201ENST00000603837 DZIP1Q86YF9 867 aaKnown RBP5.25□□□□□ -1.57
LINC01109-201ENST00000603837 PPHLN1Q8NEY8 458 aaKnown RBP5.25□□□□□ -1.57
LINC01109-201ENST00000603837 USP6NLQ92738 828 aa5.25□□□□□ -1.57
LINC01109-201ENST00000603837 HPS1Q92902 700 aa5.25□□□□□ -1.57
LINC01109-201ENST00000603837 RSRC1Q96IZ7 334 aaKnown RBP5.25□□□□□ -1.57
LINC01109-201ENST00000603837 TCHPQ9BT92 498 aa5.25□□□□□ -1.57
LINC01109-201ENST00000603837 USP26Q9BXU7 913 aa5.25□□□□□ -1.57
LINC01109-201ENST00000603837 ATP6V0A4Q9HBG4 840 aa5.25□□□□□ -1.57
LINC01109-201ENST00000603837 RTEL1Q9NZ71 1219 aa5.25□□□□□ -1.57
LINC01109-201ENST00000603837 SPATA7Q9P0W8 599 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms