RNA–Protein interactions for RNA: ENST00000602726.1

PPFIA3-208, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-208ENST00000602726 SYN1P17600 705 aa25.42■■□□□ 1.66
PPFIA3-208ENST00000602726 COL9A3Q14050 684 aaPredicted RBP25.42■■□□□ 1.66
PPFIA3-208ENST00000602726 HABP4Q5JVS0 413 aaKnown RBP25.42■■□□□ 1.66
PPFIA3-208ENST00000602726 KLHDC9Q8NEP7 349 aa25.42■■□□□ 1.66
PPFIA3-208ENST00000602726 NEK1Q96PY6 1258 aa25.42■■□□□ 1.66
PPFIA3-208ENST00000602726 RIOX1Q9H6W3 641 aa25.42■■□□□ 1.66
PPFIA3-208ENST00000602726 BAZ2BQ9UIF8 2168 aaKnown RBP25.42■■□□□ 1.66
PPFIA3-208ENST00000602726 C11orf97A0A1B0GVM6 126 aaPredicted RBP25.41■■□□□ 1.66
PPFIA3-208ENST00000602726 B4DLN1 442 aa25.41■■□□□ 1.66
PPFIA3-208ENST00000602726 KIF5BP33176 963 aa25.41■■□□□ 1.66
PPFIA3-208ENST00000602726 LIFRP42702 1097 aa25.41■■□□□ 1.66
PPFIA3-208ENST00000602726 MRPL12P52815 198 aaKnown RBP25.41■■□□□ 1.66
PPFIA3-208ENST00000602726 GJA9P57773 515 aa25.41■■□□□ 1.66
PPFIA3-208ENST00000602726 RTP1P59025 263 aa25.41■■□□□ 1.66
PPFIA3-208ENST00000602726 PDE4DQ08499 809 aa25.41■■□□□ 1.66
PPFIA3-208ENST00000602726 TRAF1Q13077 416 aa25.41■■□□□ 1.66
PPFIA3-208ENST00000602726 KCNA10Q16322 511 aa25.41■■□□□ 1.66
PPFIA3-208ENST00000602726 IQSEC1Q6DN90 963 aa25.41■■□□□ 1.66
PPFIA3-208ENST00000602726 TAPT1Q6NXT6 567 aa25.41■■□□□ 1.66
PPFIA3-208ENST00000602726 TBC1D5Q92609 795 aa25.41■■□□□ 1.66
PPFIA3-208ENST00000602726 PIGSQ96S52 555 aa25.41■■□□□ 1.66
PPFIA3-208ENST00000602726 MYL10Q9BUA6 226 aa25.41■■□□□ 1.66
PPFIA3-208ENST00000602726 LRRC2Q9BYS8 371 aa25.41■■□□□ 1.66
PPFIA3-208ENST00000602726 UPF3AQ9H1J1 476 aaKnown RBP25.41■■□□□ 1.66
PPFIA3-208ENST00000602726 PDGFCQ9NRA1 345 aa25.41■■□□□ 1.66
PPFIA3-208ENST00000602726 ATP11BQ9Y2G3 1177 aa25.41■■□□□ 1.66
PPFIA3-208ENST00000602726 PCDHA1Q9Y5I3 950 aa25.41■■□□□ 1.66
PPFIA3-208ENST00000602726 TRIOBPQ9H2D6 2365 aa25.4■■□□□ 1.66
PPFIA3-208ENST00000602726 ACLYP53396 1101 aa25.4■■□□□ 1.66
PPFIA3-208ENST00000602726 KRT32Q14532 448 aa25.4■■□□□ 1.66
PPFIA3-208ENST00000602726 SLC35G1Q2M3R5 365 aa25.4■■□□□ 1.66
PPFIA3-208ENST00000602726 TSGA10IPQ3SY00 556 aa25.4■■□□□ 1.66
PPFIA3-208ENST00000602726 RASEFQ8IZ41 740 aa25.4■■□□□ 1.66
PPFIA3-208ENST00000602726 A0A1W2PQ45 241 aaPredicted RBP25.39■■□□□ 1.66
PPFIA3-208ENST00000602726 A0A1W2PQY0 241 aa25.39■■□□□ 1.66
PPFIA3-208ENST00000602726 MYADML2A6NDP7 307 aa25.39■■□□□ 1.66
PPFIA3-208ENST00000602726 MOXD2PA6NHM9 499 aa25.39■■□□□ 1.66
PPFIA3-208ENST00000602726 CYTH3O43739 400 aa25.39■■□□□ 1.66
PPFIA3-208ENST00000602726 PPP1R11O60927 126 aaPredicted RBP25.39■■□□□ 1.66
PPFIA3-208ENST00000602726 SMPD1P17405 629 aa25.39■■□□□ 1.66
PPFIA3-208ENST00000602726 CST5P28325 142 aaPredicted RBP25.39■■□□□ 1.66
PPFIA3-208ENST00000602726 GNASQ5JWF2 1037 aa25.39■■□□□ 1.66
PPFIA3-208ENST00000602726 PCSK9Q8NBP7 692 aaKnown RBP25.39■■□□□ 1.66
PPFIA3-208ENST00000602726 SYTL5Q8TDW5 730 aaPredicted RBP25.39■■□□□ 1.66
PPFIA3-208ENST00000602726 AP5M1Q9H0R1 490 aa25.39■■□□□ 1.66
PPFIA3-208ENST00000602726 SLC12A7Q9Y666 1083 aa25.39■■□□□ 1.66
PPFIA3-208ENST00000602726 LRRC37A2A6NM11 1700 aa25.38■■□□□ 1.65
PPFIA3-208ENST00000602726 PNMA6FA0A0J9YX94 578 aa25.38■■□□□ 1.65
PPFIA3-208ENST00000602726 CFBP00751 764 aa25.38■■□□□ 1.65
PPFIA3-208ENST00000602726 CALM1P0DP23 149 aa25.38■■□□□ 1.65
PPFIA3-208ENST00000602726 CALM2P0DP24 149 aa25.38■■□□□ 1.65
PPFIA3-208ENST00000602726 CALM3P0DP25 149 aa25.38■■□□□ 1.65
PPFIA3-208ENST00000602726 IRX5P78411 483 aaPredicted RBP25.38■■□□□ 1.65
PPFIA3-208ENST00000602726 TRIM60Q495X7 471 aa25.38■■□□□ 1.65
PPFIA3-208ENST00000602726 CCSAPQ6IQ19 270 aaPredicted RBP25.38■■□□□ 1.65
PPFIA3-208ENST00000602726 LZTS2Q9BRK4 669 aa25.38■■□□□ 1.65
PPFIA3-208ENST00000602726 RBM27Q9P2N5 1060 aaKnown RBP25.38■■□□□ 1.65
PPFIA3-208ENST00000602726 GNEQ9Y223 722 aaKnown RBP25.38■■□□□ 1.65
PPFIA3-208ENST00000602726 DYNC1LI2O43237 492 aaPredicted RBP25.37■■□□□ 1.65
PPFIA3-208ENST00000602726 REC8O95072 547 aa25.37■■□□□ 1.65
PPFIA3-208ENST00000602726 EDNRBP24530 442 aa25.37■■□□□ 1.65
PPFIA3-208ENST00000602726 GNAQP50148 359 aa25.37■■□□□ 1.65
PPFIA3-208ENST00000602726 SNX17Q15036 470 aa25.37■■□□□ 1.65
PPFIA3-208ENST00000602726 C1orf53Q5VUE5 145 aa25.37■■□□□ 1.65
PPFIA3-208ENST00000602726 DHX32Q7L7V1 743 aaKnown RBP25.37■■□□□ 1.65
PPFIA3-208ENST00000602726 TLK2Q86UE8 772 aa25.37■■□□□ 1.65
PPFIA3-208ENST00000602726 NSUN6Q8TEA1 469 aaKnown RBP25.37■■□□□ 1.65
PPFIA3-208ENST00000602726 PIBF1Q8WXW3 757 aa25.37■■□□□ 1.65
PPFIA3-208ENST00000602726 TAAR1Q96RJ0 339 aa25.37■■□□□ 1.65
PPFIA3-208ENST00000602726 WDR11Q9BZH6 1224 aa25.37■■□□□ 1.65
PPFIA3-208ENST00000602726 STARD7Q9NQZ5 370 aa25.37■■□□□ 1.65
PPFIA3-208ENST00000602726 PRKAG2Q9UGJ0 569 aa25.37■■□□□ 1.65
PPFIA3-208ENST00000602726 ASGR1P07306 291 aa25.36■■□□□ 1.65
PPFIA3-208ENST00000602726 ADCK5Q3MIX3 580 aa25.36■■□□□ 1.65
PPFIA3-208ENST00000602726 SYNE3Q6ZMZ3 975 aa25.36■■□□□ 1.65
PPFIA3-208ENST00000602726 GLT1D1Q96MS3 346 aa25.36■■□□□ 1.65
PPFIA3-208ENST00000602726 RMDN3Q96TC7 470 aa25.36■■□□□ 1.65
PPFIA3-208ENST00000602726 SPZ1Q9BXG8 430 aa25.36■■□□□ 1.65
PPFIA3-208ENST00000602726 COL20A1Q9P218 1284 aa25.36■■□□□ 1.65
PPFIA3-208ENST00000602726 Q9Y3F1 56 aa25.36■■□□□ 1.65
PPFIA3-208ENST00000602726 RANBP2P49792 3224 aaKnown RBP25.36■■□□□ 1.65
PPFIA3-208ENST00000602726 OPLAHO14841 1288 aa25.35■■□□□ 1.65
PPFIA3-208ENST00000602726 HMGB1P09429 215 aaKnown RBP25.35■■□□□ 1.65
PPFIA3-208ENST00000602726 RXRAP19793 462 aa25.35■■□□□ 1.65
PPFIA3-208ENST00000602726 SMARCA1P28370 1054 aa25.35■■□□□ 1.65
PPFIA3-208ENST00000602726 NKX3-2P78367 333 aa25.35■■□□□ 1.65
PPFIA3-208ENST00000602726 BEX3Q00994 111 aa25.35■■□□□ 1.65
PPFIA3-208ENST00000602726 EXOSC10Q01780 885 aaKnown RBP25.35■■□□□ 1.65
PPFIA3-208ENST00000602726 ARHGEF16Q5VV41 709 aa25.35■■□□□ 1.65
PPFIA3-208ENST00000602726 SGMS1Q86VZ5 419 aa25.35■■□□□ 1.65
PPFIA3-208ENST00000602726 RRP36Q96EU6 259 aaKnown RBP25.35■■□□□ 1.65
PPFIA3-208ENST00000602726 PRO3102Q9H379 93 aa25.35■■□□□ 1.65
PPFIA3-208ENST00000602726 MAP3K20Q9NYL2 800 aaKnown RBP25.35■■□□□ 1.65
PPFIA3-208ENST00000602726 RBM47A0AV96 593 aaKnown RBP25.34■■□□□ 1.65
PPFIA3-208ENST00000602726 CTAGE5O15320 804 aa25.34■■□□□ 1.65
PPFIA3-208ENST00000602726 HSPA4P34932 840 aa25.34■■□□□ 1.65
PPFIA3-208ENST00000602726 MAGEA10P43363 369 aaPredicted RBP25.34■■□□□ 1.65
PPFIA3-208ENST00000602726 HSD17B4P51659 736 aa25.34■■□□□ 1.65
PPFIA3-208ENST00000602726 FSCN1Q16658 493 aaKnown RBP25.34■■□□□ 1.65
PPFIA3-208ENST00000602726 DUSP28Q4G0W2 176 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms