RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 ECE2O60344 883 aa17.08■□□□□ 0.33
PPFIA3-206ENST00000602655 KIF4AO95239 1232 aa17.08■□□□□ 0.33
PPFIA3-206ENST00000602655 SLC16A2P36021 539 aa17.08■□□□□ 0.33
PPFIA3-206ENST00000602655 CCDC70Q6NSX1 233 aa17.08■□□□□ 0.33
PPFIA3-206ENST00000602655 MIGA2Q7L4E1 593 aa17.08■□□□□ 0.33
PPFIA3-206ENST00000602655 DDX4Q9NQI0 724 aaKnown RBP17.08■□□□□ 0.33
PPFIA3-206ENST00000602655 FAM217BQ9NTX9 383 aaPredicted RBP17.08■□□□□ 0.33
PPFIA3-206ENST00000602655 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.08■□□□□ 0.33
PPFIA3-206ENST00000602655 MYO6Q9UM54 1294 aa17.08■□□□□ 0.33
PPFIA3-206ENST00000602655 NLRP5P59047 1200 aa17.08■□□□□ 0.32
PPFIA3-206ENST00000602655 SF3A3Q12874 501 aaKnown RBP eCLIP17.08■□□□□ 0.32
PPFIA3-206ENST00000602655 ZNF174Q15697 407 aa17.08■□□□□ 0.32
PPFIA3-206ENST00000602655 SP8Q8IXZ3 490 aa17.08■□□□□ 0.32
PPFIA3-206ENST00000602655 SMARCC2Q8TAQ2 1214 aa17.08■□□□□ 0.32
PPFIA3-206ENST00000602655 COG1Q8WTW3 980 aa17.08■□□□□ 0.32
PPFIA3-206ENST00000602655 RSRC1Q96IZ7 334 aaKnown RBP17.08■□□□□ 0.32
PPFIA3-206ENST00000602655 ZMYM6O95789 1325 aa17.08■□□□□ 0.32
PPFIA3-206ENST00000602655 CDKL5O76039 1030 aa17.08■□□□□ 0.32
PPFIA3-206ENST00000602655 PSMD2Q13200 908 aa17.08■□□□□ 0.32
PPFIA3-206ENST00000602655 PRKG1Q13976 671 aa17.08■□□□□ 0.32
PPFIA3-206ENST00000602655 PREPLQ4J6C6 727 aaPredicted RBP17.08■□□□□ 0.32
PPFIA3-206ENST00000602655 CCDC121Q6ZUS5 278 aa17.08■□□□□ 0.32
PPFIA3-206ENST00000602655 SPICE1Q8N0Z3 855 aa17.08■□□□□ 0.32
PPFIA3-206ENST00000602655 PNMA1Q8ND90 353 aa17.08■□□□□ 0.32
PPFIA3-206ENST00000602655 RASSF8Q8NHQ8 419 aa17.08■□□□□ 0.32
PPFIA3-206ENST00000602655 TACO1Q9BSH4 297 aaKnown RBP17.08■□□□□ 0.32
PPFIA3-206ENST00000602655 RFX7Q2KHR2 1363 aa17.08■□□□□ 0.32
PPFIA3-206ENST00000602655 IKBKBO14920 756 aa17.07■□□□□ 0.32
PPFIA3-206ENST00000602655 PFKFB1P16118 471 aa17.07■□□□□ 0.32
PPFIA3-206ENST00000602655 BAIAP2L1Q9UHR4 511 aa17.07■□□□□ 0.32
PPFIA3-206ENST00000602655 TUBB4BP68371 445 aa17.07■□□□□ 0.32
PPFIA3-206ENST00000602655 GSTO1P78417 241 aa17.07■□□□□ 0.32
PPFIA3-206ENST00000602655 CCDC96Q2M329 555 aa17.07■□□□□ 0.32
PPFIA3-206ENST00000602655 SRGAP2O75044 1071 aa17.06■□□□□ 0.32
PPFIA3-206ENST00000602655 MCM3P25205 808 aa17.06■□□□□ 0.32
PPFIA3-206ENST00000602655 CCDC181Q5TID7 509 aa17.06■□□□□ 0.32
PPFIA3-206ENST00000602655 MYSM1Q5VVJ2 828 aa17.06■□□□□ 0.32
PPFIA3-206ENST00000602655 PRAMEF18Q5VWM3 479 aa17.06■□□□□ 0.32
PPFIA3-206ENST00000602655 CRAMP1Q96RY5 1269 aa17.06■□□□□ 0.32
PPFIA3-206ENST00000602655 ADGRG1Q9Y653 693 aa17.06■□□□□ 0.32
PPFIA3-206ENST00000602655 RTL9Q8NET4 1388 aa17.06■□□□□ 0.32
PPFIA3-206ENST00000602655 EME2A4GXA9 379 aaPredicted RBP17.06■□□□□ 0.32
PPFIA3-206ENST00000602655 PRPF6O94906 941 aaKnown RBP17.06■□□□□ 0.32
PPFIA3-206ENST00000602655 TAL1P17542 331 aaPredicted RBP17.06■□□□□ 0.32
PPFIA3-206ENST00000602655 CDK8P49336 464 aa17.06■□□□□ 0.32
PPFIA3-206ENST00000602655 RBBP5Q15291 538 aaKnown RBP17.06■□□□□ 0.32
PPFIA3-206ENST00000602655 WHAMMP3Q1A5X7 153 aa17.06■□□□□ 0.32
PPFIA3-206ENST00000602655 ILDR1Q86SU0 546 aaPredicted RBP17.06■□□□□ 0.32
PPFIA3-206ENST00000602655 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.06■□□□□ 0.32
PPFIA3-206ENST00000602655 SNX1Q13596 522 aa17.06■□□□□ 0.32
PPFIA3-206ENST00000602655 TMEM139Q8IV31 216 aa17.06■□□□□ 0.32
PPFIA3-206ENST00000602655 KCNG4Q8TDN1 519 aa17.06■□□□□ 0.32
PPFIA3-206ENST00000602655 THOC1Q96FV9 657 aaKnown RBP17.06■□□□□ 0.32
PPFIA3-206ENST00000602655 SELENOOQ9BVL4 669 aa17.06■□□□□ 0.32
PPFIA3-206ENST00000602655 MROH7-TTC4A0A0A0MT08 1334 aa17.06■□□□□ 0.32
PPFIA3-206ENST00000602655 RAD9BQ6WBX8 426 aa17.05■□□□□ 0.32
PPFIA3-206ENST00000602655 CNKSR2Q8WXI2 1034 aa17.05■□□□□ 0.32
PPFIA3-206ENST00000602655 CAMKK2Q96RR4 588 aa17.05■□□□□ 0.32
PPFIA3-206ENST00000602655 SH3GL3Q99963 347 aa17.05■□□□□ 0.32
PPFIA3-206ENST00000602655 SLF1Q9BQI6 1058 aa17.05■□□□□ 0.32
PPFIA3-206ENST00000602655 BPIFA3Q9BQP9 254 aa17.05■□□□□ 0.32
PPFIA3-206ENST00000602655 ATP8A2Q9NTI2 1148 aa17.05■□□□□ 0.32
PPFIA3-206ENST00000602655 HDAC6Q9UBN7 1215 aa17.05■□□□□ 0.32
PPFIA3-206ENST00000602655 NWD2Q9ULI1 1742 aa17.05■□□□□ 0.32
PPFIA3-206ENST00000602655 EIF4E1BA6NMX2 242 aaKnown RBP17.05■□□□□ 0.32
PPFIA3-206ENST00000602655 TBC1D8BQ0IIM8 1120 aa17.05■□□□□ 0.32
PPFIA3-206ENST00000602655 SH2D3CQ8N5H7 860 aa17.05■□□□□ 0.32
PPFIA3-206ENST00000602655 LLPHQ9BRT6 129 aaKnown RBP17.05■□□□□ 0.32
PPFIA3-206ENST00000602655 RTFDC1Q9BY42 306 aaPredicted RBP17.05■□□□□ 0.32
PPFIA3-206ENST00000602655 DDX20Q9UHI6 824 aaKnown RBP17.05■□□□□ 0.32
PPFIA3-206ENST00000602655 ADAMTS3O15072 1205 aa17.05■□□□□ 0.32
PPFIA3-206ENST00000602655 CDC25CP30307 473 aa17.05■□□□□ 0.32
PPFIA3-206ENST00000602655 STX17P56962 302 aa17.05■□□□□ 0.32
PPFIA3-206ENST00000602655 KIF23Q02241 960 aaPredicted RBP17.05■□□□□ 0.32
PPFIA3-206ENST00000602655 GRIN1Q05586 938 aa17.05■□□□□ 0.32
PPFIA3-206ENST00000602655 PIK3AP1Q6ZUJ8 805 aa17.05■□□□□ 0.32
PPFIA3-206ENST00000602655 TRMT1LQ7Z2T5 733 aaKnown RBP17.05■□□□□ 0.32
PPFIA3-206ENST00000602655 PARD3BQ8TEW8 1205 aa17.05■□□□□ 0.32
PPFIA3-206ENST00000602655 SLC40A1Q9NP59 571 aa17.05■□□□□ 0.32
PPFIA3-206ENST00000602655 FZD1Q9UP38 647 aa17.05■□□□□ 0.32
PPFIA3-206ENST00000602655 SEMA3EO15041 775 aa17.04■□□□□ 0.32
PPFIA3-206ENST00000602655 C12orf60Q5U649 245 aa17.04■□□□□ 0.32
PPFIA3-206ENST00000602655 FLAD1Q8NFF5 587 aa17.04■□□□□ 0.32
PPFIA3-206ENST00000602655 TEKT1Q969V4 418 aa17.04■□□□□ 0.32
PPFIA3-206ENST00000602655 ABL1P00519 1130 aa17.04■□□□□ 0.32
PPFIA3-206ENST00000602655 ALX1Q15699 326 aa17.04■□□□□ 0.32
PPFIA3-206ENST00000602655 SRBD1Q8N5C6 995 aaKnown RBP17.04■□□□□ 0.32
PPFIA3-206ENST00000602655 CEP95Q96GE4 821 aa17.04■□□□□ 0.32
PPFIA3-206ENST00000602655 PPANQ9NQ55 473 aaKnown RBP17.04■□□□□ 0.32
PPFIA3-206ENST00000602655 FLT1P17948 1338 aa17.04■□□□□ 0.32
PPFIA3-206ENST00000602655 MCM7P33993 719 aa17.04■□□□□ 0.32
PPFIA3-206ENST00000602655 KCTD1Q719H9 257 aa17.04■□□□□ 0.32
PPFIA3-206ENST00000602655 KIAA1328Q86T90 577 aa17.04■□□□□ 0.32
PPFIA3-206ENST00000602655 LINC00301Q8NCQ3 95 aa17.04■□□□□ 0.32
PPFIA3-206ENST00000602655 SAAL1Q96ER3 474 aa17.04■□□□□ 0.32
PPFIA3-206ENST00000602655 IL17RBQ9NRM6 502 aa17.04■□□□□ 0.32
PPFIA3-206ENST00000602655 ARPP21Q9UBL0 812 aaPredicted RBP17.04■□□□□ 0.32
PPFIA3-206ENST00000602655 COBLO75128 1261 aa17.03■□□□□ 0.32
PPFIA3-206ENST00000602655 AKR1B1P15121 316 aa17.03■□□□□ 0.32
PPFIA3-206ENST00000602655 CRKP46108 304 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms