RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 GGA1Q9UJY5 639 aa9.47□□□□□ -0.89
CSMD1-216ENST00000602557 ASXL2Q76L83 1435 aa9.47□□□□□ -0.89
CSMD1-216ENST00000602557 GCFC2P16383 781 aaKnown RBP9.47□□□□□ -0.89
CSMD1-216ENST00000602557 GIMAP4Q9NUV9 329 aa9.47□□□□□ -0.89
CSMD1-216ENST00000602557 ME3Q16798 604 aa9.47□□□□□ -0.89
CSMD1-216ENST00000602557 TMTC3Q6ZXV5 915 aa9.47□□□□□ -0.89
CSMD1-216ENST00000602557 TRMT10CQ7L0Y3 403 aaKnown RBP9.47□□□□□ -0.89
CSMD1-216ENST00000602557 GPBP1Q86WP2 473 aa9.47□□□□□ -0.89
CSMD1-216ENST00000602557 CPXCR1Q8N123 301 aa9.47□□□□□ -0.89
CSMD1-216ENST00000602557 GABPB2Q8TAK5 448 aaPredicted RBP9.47□□□□□ -0.89
CSMD1-216ENST00000602557 UBAP1LF5GYI3 381 aa9.47□□□□□ -0.89
CSMD1-216ENST00000602557 P3H4Q92791 437 aa9.47□□□□□ -0.89
CSMD1-216ENST00000602557 SCYL1Q96KG9 808 aa9.47□□□□□ -0.89
CSMD1-216ENST00000602557 SORBS3O60504 671 aa9.47□□□□□ -0.89
CSMD1-216ENST00000602557 PFKFB1P16118 471 aa9.47□□□□□ -0.89
CSMD1-216ENST00000602557 ATF7P17544 494 aaPredicted RBP9.47□□□□□ -0.89
CSMD1-216ENST00000602557 KBTBD3Q8NAB2 608 aa9.47□□□□□ -0.89
CSMD1-216ENST00000602557 TESK2Q96S53 571 aa9.47□□□□□ -0.89
CSMD1-216ENST00000602557 SEPT10Q9P0V9 454 aa9.47□□□□□ -0.89
CSMD1-216ENST00000602557 MAP3K19Q56UN5 1328 aa9.47□□□□□ -0.89
CSMD1-216ENST00000602557 NUP153P49790 1475 aaKnown RBP9.47□□□□□ -0.89
CSMD1-216ENST00000602557 HEXIM1O94992 359 aaKnown RBP9.47□□□□□ -0.89
CSMD1-216ENST00000602557 XRCC5P13010 732 aaKnown RBP9.47□□□□□ -0.89
CSMD1-216ENST00000602557 TMED10P49755 219 aaKnown RBP9.47□□□□□ -0.89
CSMD1-216ENST00000602557 LGSNQ5TDP6 509 aa9.47□□□□□ -0.89
CSMD1-216ENST00000602557 AMFRQ9UKV5 643 aa9.47□□□□□ -0.89
CSMD1-216ENST00000602557 PLAAQ9Y263 795 aa9.47□□□□□ -0.89
CSMD1-216ENST00000602557 SOWAHDA6NJG2 315 aa9.47□□□□□ -0.89
CSMD1-216ENST00000602557 GAS7O60861 476 aa9.47□□□□□ -0.89
CSMD1-216ENST00000602557 CCHCR1Q8TD31 782 aa9.47□□□□□ -0.89
CSMD1-216ENST00000602557 NOVA2Q9UNW9 492 aaKnown RBP9.47□□□□□ -0.89
CSMD1-216ENST00000602557 STK24Q9Y6E0 443 aa9.47□□□□□ -0.89
CSMD1-216ENST00000602557 RSBN1LQ6PCB5 846 aaPredicted RBP9.46□□□□□ -0.89
CSMD1-216ENST00000602557 NCKAP5LQ9HCH0 1330 aa9.46□□□□□ -0.89
CSMD1-216ENST00000602557 MYH10P35580 1976 aa9.46□□□□□ -0.89
CSMD1-216ENST00000602557 E7EWF7 191 aa9.46□□□□□ -0.89
CSMD1-216ENST00000602557 SUCLG2Q96I99 432 aa9.46□□□□□ -0.89
CSMD1-216ENST00000602557 SLC12A2P55011 1212 aa9.46□□□□□ -0.89
CSMD1-216ENST00000602557 APBA1Q02410 837 aa9.46□□□□□ -0.89
CSMD1-216ENST00000602557 CABP7Q86V35 215 aa9.46□□□□□ -0.89
CSMD1-216ENST00000602557 ELAC2Q9BQ52 826 aaKnown RBP9.46□□□□□ -0.89
CSMD1-216ENST00000602557 PTPN22Q9Y2R2 807 aa9.46□□□□□ -0.89
CSMD1-216ENST00000602557 TMA7Q9Y2S6 64 aaKnown RBP9.46□□□□□ -0.89
CSMD1-216ENST00000602557 CNOT10Q9H9A5 744 aaKnown RBP9.46□□□□□ -0.89
CSMD1-216ENST00000602557 DDX28Q9NUL7 540 aaKnown RBP9.46□□□□□ -0.89
CSMD1-216ENST00000602557 CASP2P42575 452 aa9.46□□□□□ -0.89
CSMD1-216ENST00000602557 C6orf118Q5T5N4 469 aa9.46□□□□□ -0.89
CSMD1-216ENST00000602557 JADE1Q6IE81 842 aa9.46□□□□□ -0.89
CSMD1-216ENST00000602557 CMTR1Q8N1G2 835 aaKnown RBP9.46□□□□□ -0.89
CSMD1-216ENST00000602557 ANO3Q9BYT9 981 aa9.46□□□□□ -0.89
CSMD1-216ENST00000602557 SPC25Q9HBM1 224 aa9.46□□□□□ -0.89
CSMD1-216ENST00000602557 BLMP54132 1417 aaPredicted RBP9.46□□□□□ -0.9
CSMD1-216ENST00000602557 CFBP00751 764 aa9.46□□□□□ -0.9
CSMD1-216ENST00000602557 MMEL1Q495T6 779 aa9.46□□□□□ -0.9
CSMD1-216ENST00000602557 NSMFQ6X4W1 530 aa9.46□□□□□ -0.9
CSMD1-216ENST00000602557 CARD10Q9BWT7 1032 aa9.46□□□□□ -0.9
CSMD1-216ENST00000602557 CCDC68Q9H2F9 335 aa9.46□□□□□ -0.9
CSMD1-216ENST00000602557 AZI2Q9H6S1 392 aa9.46□□□□□ -0.9
CSMD1-216ENST00000602557 ZNF229Q9UJW7 825 aa9.46□□□□□ -0.9
CSMD1-216ENST00000602557 TEX14Q8IWB6 1497 aa9.46□□□□□ -0.9
CSMD1-216ENST00000602557 STAM2O75886 525 aa9.46□□□□□ -0.9
CSMD1-216ENST00000602557 CCDC51Q96ER9 411 aa9.46□□□□□ -0.9
CSMD1-216ENST00000602557 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.46□□□□□ -0.9
CSMD1-216ENST00000602557 FAM47AQ5JRC9 791 aa9.46□□□□□ -0.9
CSMD1-216ENST00000602557 SPAG7O75391 227 aa9.46□□□□□ -0.9
CSMD1-216ENST00000602557 NEK2P51955 445 aa9.46□□□□□ -0.9
CSMD1-216ENST00000602557 DCLK2Q8N568 766 aa9.46□□□□□ -0.9
CSMD1-216ENST00000602557 METTL13Q8N6R0 699 aa9.46□□□□□ -0.9
CSMD1-216ENST00000602557 ANKRD13CQ8N6S4 541 aa9.46□□□□□ -0.9
CSMD1-216ENST00000602557 CCDC138Q96M89 665 aa9.46□□□□□ -0.9
CSMD1-216ENST00000602557 EDC4Q6P2E9 1401 aaKnown RBP9.46□□□□□ -0.9
CSMD1-216ENST00000602557 POC1B-GALNT4F8VUJ3 575 aa9.46□□□□□ -0.9
CSMD1-216ENST00000602557 RSPH3Q86UC2 560 aa9.46□□□□□ -0.9
CSMD1-216ENST00000602557 NOSTRINQ8IVI9 506 aa9.46□□□□□ -0.9
CSMD1-216ENST00000602557 ARHGAP18Q8N392 663 aa9.46□□□□□ -0.9
CSMD1-216ENST00000602557 OR8K1Q8NGG5 319 aa9.46□□□□□ -0.9
CSMD1-216ENST00000602557 SDCCAG3Q96C92 435 aa9.46□□□□□ -0.9
CSMD1-216ENST00000602557 PARP2Q9UGN5 583 aa9.46□□□□□ -0.9
CSMD1-216ENST00000602557 ALS2CLQ60I27 953 aa9.45□□□□□ -0.9
CSMD1-216ENST00000602557 CCDC151A5D8V7 595 aa9.45□□□□□ -0.9
CSMD1-216ENST00000602557 CD2BP2O95400 341 aaKnown RBP9.45□□□□□ -0.9
CSMD1-216ENST00000602557 CCDC24Q8N4L8 307 aa9.45□□□□□ -0.9
CSMD1-216ENST00000602557 IP6K1Q92551 441 aa9.45□□□□□ -0.9
CSMD1-216ENST00000602557 RPS6KA2Q15349 733 aa9.45□□□□□ -0.9
CSMD1-216ENST00000602557 NUDCD1Q96RS6 583 aa9.45□□□□□ -0.9
CSMD1-216ENST00000602557 GPHNQ9NQX3 736 aaPredicted RBP9.45□□□□□ -0.9
CSMD1-216ENST00000602557 UBAP1Q9NZ09 502 aa9.45□□□□□ -0.9
CSMD1-216ENST00000602557 CYP2C19P33261 490 aa9.45□□□□□ -0.9
CSMD1-216ENST00000602557 EIF2AQ9BY44 585 aaKnown RBP9.45□□□□□ -0.9
CSMD1-216ENST00000602557 BEND6Q5SZJ8 279 aaPredicted RBP9.45□□□□□ -0.9
CSMD1-216ENST00000602557 CCNL1Q9UK58 526 aaPredicted RBP9.45□□□□□ -0.9
CSMD1-216ENST00000602557 ATF2P15336 505 aa9.45□□□□□ -0.9
CSMD1-216ENST00000602557 DDIT3P35638 169 aa9.45□□□□□ -0.9
CSMD1-216ENST00000602557 CD248Q9HCU0 757 aa9.45□□□□□ -0.9
CSMD1-216ENST00000602557 DMRT2Q9Y5R5 561 aa9.45□□□□□ -0.9
CSMD1-216ENST00000602557 PRPF6O94906 941 aaKnown RBP9.45□□□□□ -0.9
CSMD1-216ENST00000602557 SYF2O95926 243 aaKnown RBP9.45□□□□□ -0.9
CSMD1-216ENST00000602557 FAM102BQ5T8I3 360 aa9.45□□□□□ -0.9
CSMD1-216ENST00000602557 TDRD7Q8NHU6 1098 aaKnown RBP9.45□□□□□ -0.9
CSMD1-216ENST00000602557 TBK1Q9UHD2 729 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms