RNA–Protein interactions for RNA: ENST00000601372.5

ZNF558-207, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF558, Length 7,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-207ENST00000601372 SEC31AO94979 1220 aaKnown RBP12.26□□□□□ -0.45
ZNF558-207ENST00000601372 GBP2P32456 591 aaPredicted RBP12.26□□□□□ -0.45
ZNF558-207ENST00000601372 KCNJ12Q14500 433 aa12.26□□□□□ -0.45
ZNF558-207ENST00000601372 CDC37Q16543 378 aaPredicted RBP12.26□□□□□ -0.45
ZNF558-207ENST00000601372 NR5A1Q13285 461 aa12.25□□□□□ -0.45
ZNF558-207ENST00000601372 XKR9Q5GH70 373 aa12.25□□□□□ -0.45
ZNF558-207ENST00000601372 GSTTP1A0A1W2PQM5 241 aa12.25□□□□□ -0.45
ZNF558-207ENST00000601372 SH2B2O14492 632 aaPredicted RBP12.25□□□□□ -0.45
ZNF558-207ENST00000601372 GCNT3O95395 438 aa12.25□□□□□ -0.45
ZNF558-207ENST00000601372 RFX1P22670 979 aa12.25□□□□□ -0.45
ZNF558-207ENST00000601372 SLFN12Q8IYM2 578 aa12.25□□□□□ -0.45
ZNF558-207ENST00000601372 SLC44A5Q8NCS7 719 aa12.25□□□□□ -0.45
ZNF558-207ENST00000601372 DEPTORQ8TB45 409 aa12.25□□□□□ -0.45
ZNF558-207ENST00000601372 TSGA10Q9BZW7 698 aa12.25□□□□□ -0.45
ZNF558-207ENST00000601372 SEPT9Q9UHD8 586 aaPredicted RBP12.25□□□□□ -0.45
ZNF558-207ENST00000601372 CEMIPQ8WUJ3 1361 aa12.25□□□□□ -0.45
ZNF558-207ENST00000601372 PALM3A6NDB9 673 aaPredicted RBP12.25□□□□□ -0.45
ZNF558-207ENST00000601372 RPS12P25398 132 aaKnown RBP12.25□□□□□ -0.45
ZNF558-207ENST00000601372 POLRMTO00411 1230 aaKnown RBP12.25□□□□□ -0.45
ZNF558-207ENST00000601372 KIF4AO95239 1232 aa12.25□□□□□ -0.45
ZNF558-207ENST00000601372 MMP19Q99542 508 aa12.25□□□□□ -0.45
ZNF558-207ENST00000601372 ZNF577Q9BSK1 485 aa12.25□□□□□ -0.45
ZNF558-207ENST00000601372 MRPL44Q9H9J2 332 aaKnown RBP12.25□□□□□ -0.45
ZNF558-207ENST00000601372 POLGP54098 1239 aaPredicted RBP12.25□□□□□ -0.45
ZNF558-207ENST00000601372 TRPC3Q13507 836 aa12.25□□□□□ -0.45
ZNF558-207ENST00000601372 PDIA6Q15084 440 aa12.25□□□□□ -0.45
ZNF558-207ENST00000601372 NELFCDQ8IXH7 590 aa12.25□□□□□ -0.45
ZNF558-207ENST00000601372 MAN1B1Q9UKM7 699 aa12.25□□□□□ -0.45
ZNF558-207ENST00000601372 AKT3Q9Y243 479 aa12.25□□□□□ -0.45
ZNF558-207ENST00000601372 CD2APQ9Y5K6 639 aa12.25□□□□□ -0.45
ZNF558-207ENST00000601372 UTYO14607 1347 aa12.25□□□□□ -0.45
ZNF558-207ENST00000601372 SLC39A14Q15043 492 aa12.25□□□□□ -0.45
ZNF558-207ENST00000601372 CNNM4Q6P4Q7 775 aa12.25□□□□□ -0.45
ZNF558-207ENST00000601372 RASGRP4Q8TDF6 673 aa12.25□□□□□ -0.45
ZNF558-207ENST00000601372 EEF2P13639 858 aaKnown RBP12.24□□□□□ -0.45
ZNF558-207ENST00000601372 TMOD1P28289 359 aa12.24□□□□□ -0.45
ZNF558-207ENST00000601372 POLR3EQ9NVU0 708 aa12.24□□□□□ -0.45
ZNF558-207ENST00000601372 PCDHA12Q9UN75 941 aa12.24□□□□□ -0.45
ZNF558-207ENST00000601372 NEDD4P46934 1319 aa12.24□□□□□ -0.45
ZNF558-207ENST00000601372 EPB41P11171 864 aaKnown RBP12.24□□□□□ -0.45
ZNF558-207ENST00000601372 CTNNA2P26232 953 aa12.24□□□□□ -0.45
ZNF558-207ENST00000601372 TYW1BQ6NUM6 668 aa12.24□□□□□ -0.45
ZNF558-207ENST00000601372 RNF207Q6ZRF8 634 aa12.24□□□□□ -0.45
ZNF558-207ENST00000601372 CYB5R4Q7L1T6 521 aa12.24□□□□□ -0.45
ZNF558-207ENST00000601372 FAM193BQ96PV7 902 aaPredicted RBP12.24□□□□□ -0.45
ZNF558-207ENST00000601372 STRBPQ96SI9 672 aaKnown RBP12.24□□□□□ -0.45
ZNF558-207ENST00000601372 ZSWIM5Q9P217 1185 aa12.24□□□□□ -0.45
ZNF558-207ENST00000601372 FEM1BQ9UK73 627 aa12.24□□□□□ -0.45
ZNF558-207ENST00000601372 RCOR1Q9UKL0 485 aa12.24□□□□□ -0.45
ZNF558-207ENST00000601372 PCDHA5Q9Y5H7 936 aa12.24□□□□□ -0.45
ZNF558-207ENST00000601372 CCDC172P0C7W6 258 aa12.24□□□□□ -0.45
ZNF558-207ENST00000601372 HOXA13P31271 388 aaPredicted RBP12.24□□□□□ -0.45
ZNF558-207ENST00000601372 TAF1CQ15572 869 aaPredicted RBP12.24□□□□□ -0.45
ZNF558-207ENST00000601372 NEK8Q86SG6 692 aa12.24□□□□□ -0.45
ZNF558-207ENST00000601372 NBPF11Q86T75 865 aa12.24□□□□□ -0.45
ZNF558-207ENST00000601372 YY1P25490 414 aa12.24□□□□□ -0.45
ZNF558-207ENST00000601372 MTMR2Q13614 643 aa12.24□□□□□ -0.45
ZNF558-207ENST00000601372 TRIM14Q14142 442 aa12.24□□□□□ -0.45
ZNF558-207ENST00000601372 IFI16Q16666 785 aaKnown RBP12.24□□□□□ -0.45
ZNF558-207ENST00000601372 MIS18BP1Q6P0N0 1132 aa12.24□□□□□ -0.45
ZNF558-207ENST00000601372 CLEC17AQ6ZS10 378 aa12.24□□□□□ -0.45
ZNF558-207ENST00000601372 ADARB2Q9NS39 739 aaKnown RBP12.24□□□□□ -0.45
ZNF558-207ENST00000601372 COL3A1P02461 1466 aaPredicted RBP12.24□□□□□ -0.45
ZNF558-207ENST00000601372 PTGDRQ13258 359 aa12.24□□□□□ -0.45
ZNF558-207ENST00000601372 SNRNP48Q6IEG0 339 aaKnown RBP12.24□□□□□ -0.45
ZNF558-207ENST00000601372 PTF1AQ7RTS3 328 aa12.24□□□□□ -0.45
ZNF558-207ENST00000601372 SELENOOQ9BVL4 669 aa12.24□□□□□ -0.45
ZNF558-207ENST00000601372 CALUO43852 315 aaPredicted RBP12.23□□□□□ -0.45
ZNF558-207ENST00000601372 KRT19P08727 400 aa12.23□□□□□ -0.45
ZNF558-207ENST00000601372 KRT5P13647 590 aa12.23□□□□□ -0.45
ZNF558-207ENST00000601372 GJC1P36383 396 aa12.23□□□□□ -0.45
ZNF558-207ENST00000601372 RSPH3Q86UC2 560 aa12.23□□□□□ -0.45
ZNF558-207ENST00000601372 RPAP3Q9H6T3 665 aaPredicted RBP12.23□□□□□ -0.45
ZNF558-207ENST00000601372 NRBP2Q9NSY0 501 aa12.23□□□□□ -0.45
ZNF558-207ENST00000601372 CAMTA1Q9Y6Y1 1673 aa12.23□□□□□ -0.45
ZNF558-207ENST00000601372 A0A1W2PQ27 194 aa12.23□□□□□ -0.45
ZNF558-207ENST00000601372 A0A1W2PQ64 194 aa12.23□□□□□ -0.45
ZNF558-207ENST00000601372 A0A1W2PQD8 194 aa12.23□□□□□ -0.45
ZNF558-207ENST00000601372 RBL2Q08999 1139 aa12.23□□□□□ -0.45
ZNF558-207ENST00000601372 SNAPC2Q13487 334 aa12.23□□□□□ -0.45
ZNF558-207ENST00000601372 TBC1D10CQ8IV04 446 aa12.23□□□□□ -0.45
ZNF558-207ENST00000601372 C10orf67Q8IYJ2 551 aa12.23□□□□□ -0.45
ZNF558-207ENST00000601372 DCAF4Q8WV16 495 aa12.23□□□□□ -0.45
ZNF558-207ENST00000601372 FAM207AQ9NSI2 230 aaPredicted RBP12.23□□□□□ -0.45
ZNF558-207ENST00000601372 PODXL2Q9NZ53 605 aa12.23□□□□□ -0.45
ZNF558-207ENST00000601372 PPP6R2O75170 966 aa12.23□□□□□ -0.45
ZNF558-207ENST00000601372 SRGNP10124 158 aa12.23□□□□□ -0.45
ZNF558-207ENST00000601372 RPL13P26373 211 aaKnown RBP12.23□□□□□ -0.45
ZNF558-207ENST00000601372 HMGCS2P54868 508 aa12.23□□□□□ -0.45
ZNF558-207ENST00000601372 WDR44Q5JSH3 913 aa12.23□□□□□ -0.45
ZNF558-207ENST00000601372 ATG9AQ7Z3C6 839 aa12.23□□□□□ -0.45
ZNF558-207ENST00000601372 DDNO94850 711 aaPredicted RBP12.23□□□□□ -0.45
ZNF558-207ENST00000601372 ZFYVE28Q9HCC9 887 aa12.23□□□□□ -0.45
ZNF558-207ENST00000601372 POLLQ9UGP5 575 aa12.23□□□□□ -0.45
ZNF558-207ENST00000601372 PCDHB6Q9Y5E3 794 aa12.23□□□□□ -0.45
ZNF558-207ENST00000601372 NALCNQ8IZF0 1738 aa12.23□□□□□ -0.45
ZNF558-207ENST00000601372 SECISBP2LQ93073 1101 aaKnown RBP12.23□□□□□ -0.45
ZNF558-207ENST00000601372 DAGLAQ9Y4D2 1042 aa12.23□□□□□ -0.45
ZNF558-207ENST00000601372 KNDC1Q76NI1 1749 aa12.23□□□□□ -0.45
ZNF558-207ENST00000601372 ATP1A3P13637 1013 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms