RNA–Protein interactions for RNA: ENST00000600879.5

HIF3A-219, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-219ENST00000600879 PIEZO1Q92508 2521 aa11.86□□□□□ -0.51
HIF3A-219ENST00000600879 ZNF536O15090 1300 aa11.86□□□□□ -0.51
HIF3A-219ENST00000600879 PRR33A8MZF0 331 aa11.85□□□□□ -0.51
HIF3A-219ENST00000600879 TTLL1O95922 423 aa11.85□□□□□ -0.51
HIF3A-219ENST00000600879 TCTN1Q2MV58 587 aa11.85□□□□□ -0.51
HIF3A-219ENST00000600879 SBK1Q52WX2 424 aa11.85□□□□□ -0.51
HIF3A-219ENST00000600879 IQSEC1Q6DN90 963 aa11.85□□□□□ -0.51
HIF3A-219ENST00000600879 FAM117BQ6P1L5 589 aa11.85□□□□□ -0.51
HIF3A-219ENST00000600879 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.85□□□□□ -0.51
HIF3A-219ENST00000600879 SLC9A7Q96T83 725 aa11.85□□□□□ -0.51
HIF3A-219ENST00000600879 UBE2ZQ9H832 354 aaPredicted RBP11.85□□□□□ -0.51
HIF3A-219ENST00000600879 EPB41L4AQ9HCS5 686 aaPredicted RBP11.85□□□□□ -0.51
HIF3A-219ENST00000600879 MTMR7Q9Y216 660 aa11.85□□□□□ -0.51
HIF3A-219ENST00000600879 MYH4Q9Y623 1939 aa11.85□□□□□ -0.51
HIF3A-219ENST00000600879 APPP05067 770 aa11.84□□□□□ -0.51
HIF3A-219ENST00000600879 PFKMP08237 780 aa11.84□□□□□ -0.51
HIF3A-219ENST00000600879 IQCF3P0C7M6 154 aa11.84□□□□□ -0.51
HIF3A-219ENST00000600879 SUPT20HL2P0C7V6 817 aa11.84□□□□□ -0.51
HIF3A-219ENST00000600879 MCCP23508 829 aa11.84□□□□□ -0.51
HIF3A-219ENST00000600879 TDO2P48775 406 aa11.84□□□□□ -0.51
HIF3A-219ENST00000600879 STAT2P52630 851 aa11.84□□□□□ -0.51
HIF3A-219ENST00000600879 DEFB103AP81534 67 aa11.84□□□□□ -0.51
HIF3A-219ENST00000600879 CSPP1Q1MSJ5 1256 aa11.84□□□□□ -0.51
HIF3A-219ENST00000600879 NBPF20Q3BBV1 942 aa11.84□□□□□ -0.51
HIF3A-219ENST00000600879 ZSCAN25Q6NSZ9 544 aa11.84□□□□□ -0.51
HIF3A-219ENST00000600879 KCTD1Q719H9 257 aa11.84□□□□□ -0.51
HIF3A-219ENST00000600879 SIRT2Q8IXJ6 389 aa11.84□□□□□ -0.51
HIF3A-219ENST00000600879 FAM178BQ8IXR5 827 aa11.84□□□□□ -0.51
HIF3A-219ENST00000600879 GMCL1P1Q8NEA9 526 aa11.84□□□□□ -0.51
HIF3A-219ENST00000600879 MKL1Q969V6 931 aa11.84□□□□□ -0.51
HIF3A-219ENST00000600879 SEZ6LQ9BYH1 1024 aa11.84□□□□□ -0.51
HIF3A-219ENST00000600879 CYP39A1Q9NYL5 469 aa11.84□□□□□ -0.51
HIF3A-219ENST00000600879 WDFY4Q6ZS81 3184 aa11.83□□□□□ -0.52
HIF3A-219ENST00000600879 KIF28PB7ZC32 967 aa11.83□□□□□ -0.52
HIF3A-219ENST00000600879 H3BQ06 376 aaPredicted RBP11.83□□□□□ -0.52
HIF3A-219ENST00000600879 SMARCA5O60264 1052 aaPredicted RBP11.83□□□□□ -0.52
HIF3A-219ENST00000600879 TSPY3P0CV98 308 aa11.83□□□□□ -0.52
HIF3A-219ENST00000600879 TSPY8P0CW00 308 aa11.83□□□□□ -0.52
HIF3A-219ENST00000600879 SLC1A4P43007 532 aa11.83□□□□□ -0.52
HIF3A-219ENST00000600879 PURAQ00577 322 aaKnown RBP11.83□□□□□ -0.52
HIF3A-219ENST00000600879 PTCRAQ6ISU1 281 aaPredicted RBP11.83□□□□□ -0.52
HIF3A-219ENST00000600879 RETREG2Q8NC44 543 aa11.83□□□□□ -0.52
HIF3A-219ENST00000600879 OR6J1Q8NGC5 347 aa11.83□□□□□ -0.52
HIF3A-219ENST00000600879 OSBP2Q969R2 916 aa11.83□□□□□ -0.52
HIF3A-219ENST00000600879 ZBED2Q9BTP6 218 aa11.83□□□□□ -0.52
HIF3A-219ENST00000600879 WDR11Q9BZH6 1224 aa11.83□□□□□ -0.52
HIF3A-219ENST00000600879 SUGCTQ9HAC7 445 aa11.83□□□□□ -0.52
HIF3A-219ENST00000600879 VTA1Q9NP79 307 aa11.83□□□□□ -0.52
HIF3A-219ENST00000600879 GPHNQ9NQX3 736 aaPredicted RBP11.83□□□□□ -0.52
HIF3A-219ENST00000600879 POLR3EQ9NVU0 708 aa11.83□□□□□ -0.52
HIF3A-219ENST00000600879 MYH7P12883 1935 aa11.82□□□□□ -0.52
HIF3A-219ENST00000600879 M0R2C6 588 aa11.82□□□□□ -0.52
HIF3A-219ENST00000600879 RAB11FIP3O75154 756 aa11.82□□□□□ -0.52
HIF3A-219ENST00000600879 HMMRO75330 724 aa11.82□□□□□ -0.52
HIF3A-219ENST00000600879 FDX1P10109 184 aa11.82□□□□□ -0.52
HIF3A-219ENST00000600879 KCNJ6P48051 423 aa11.82□□□□□ -0.52
HIF3A-219ENST00000600879 WDR5P61964 334 aaKnown RBP11.82□□□□□ -0.52
HIF3A-219ENST00000600879 TFAP4Q01664 338 aa11.82□□□□□ -0.52
HIF3A-219ENST00000600879 TKFCQ3LXA3 575 aa11.82□□□□□ -0.52
HIF3A-219ENST00000600879 DUSP28Q4G0W2 176 aa11.82□□□□□ -0.52
HIF3A-219ENST00000600879 EP400NLQ6ZTU2 488 aa11.82□□□□□ -0.52
HIF3A-219ENST00000600879 FAM160B2Q86V87 743 aa11.82□□□□□ -0.52
HIF3A-219ENST00000600879 RPAP2Q8IXW5 612 aaPredicted RBP11.82□□□□□ -0.52
HIF3A-219ENST00000600879 PHOSPHO2Q8TCD6 241 aa11.82□□□□□ -0.52
HIF3A-219ENST00000600879 CHURC1Q8WUH1 139 aa11.82□□□□□ -0.52
HIF3A-219ENST00000600879 STAG1Q8WVM7 1258 aa11.82□□□□□ -0.52
HIF3A-219ENST00000600879 COPS5Q92905 334 aa11.82□□□□□ -0.52
HIF3A-219ENST00000600879 MTG1Q9BT17 334 aaPredicted RBP11.82□□□□□ -0.52
HIF3A-219ENST00000600879 CCPG1Q9ULG6 757 aa11.82□□□□□ -0.52
HIF3A-219ENST00000600879 PRR12Q9ULL5 1215 aa11.82□□□□□ -0.52
HIF3A-219ENST00000600879 NOD1Q9Y239 953 aa11.82□□□□□ -0.52
HIF3A-219ENST00000600879 Q9Y3F1 56 aa11.82□□□□□ -0.52
HIF3A-219ENST00000600879 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.81□□□□□ -0.52
HIF3A-219ENST00000600879 GPAA1O43292 621 aa11.81□□□□□ -0.52
HIF3A-219ENST00000600879 RFC2P35250 354 aa11.81□□□□□ -0.52
HIF3A-219ENST00000600879 CPT1AP50416 773 aa11.81□□□□□ -0.52
HIF3A-219ENST00000600879 ALDH5A1P51649 535 aaPredicted RBP11.81□□□□□ -0.52
HIF3A-219ENST00000600879 BAATQ14032 418 aaPredicted RBP11.81□□□□□ -0.52
HIF3A-219ENST00000600879 GPNMBQ14956 572 aa11.81□□□□□ -0.52
HIF3A-219ENST00000600879 LEXMQ3ZCV2 418 aa11.81□□□□□ -0.52
HIF3A-219ENST00000600879 TSHZ3Q63HK5 1081 aa11.81□□□□□ -0.52
HIF3A-219ENST00000600879 NEDD1Q8NHV4 660 aa11.81□□□□□ -0.52
HIF3A-219ENST00000600879 GMCL1Q96IK5 515 aa11.81□□□□□ -0.52
HIF3A-219ENST00000600879 PTPRSQ13332 1948 aa11.8□□□□□ -0.52
HIF3A-219ENST00000600879 PTPDC1A2A3K4 754 aa11.8□□□□□ -0.52
HIF3A-219ENST00000600879 NMT2O60551 498 aa11.8□□□□□ -0.52
HIF3A-219ENST00000600879 CCDC96Q2M329 555 aa11.8□□□□□ -0.52
HIF3A-219ENST00000600879 GIMAP6Q6P9H5 292 aa11.8□□□□□ -0.52
HIF3A-219ENST00000600879 HFE2Q6ZVN8 426 aa11.8□□□□□ -0.52
HIF3A-219ENST00000600879 APPBP2Q92624 585 aa11.8□□□□□ -0.52
HIF3A-219ENST00000600879 C17orf80Q9BSJ5 609 aa11.8□□□□□ -0.52
HIF3A-219ENST00000600879 ZNF287Q9HBT7 754 aa11.8□□□□□ -0.52
HIF3A-219ENST00000600879 STX8Q9UNK0 236 aa11.8□□□□□ -0.52
HIF3A-219ENST00000600879 LCTP09848 1927 aa11.8□□□□□ -0.52
HIF3A-219ENST00000600879 TANC1Q9C0D5 1861 aa11.79□□□□□ -0.52
HIF3A-219ENST00000600879 LINC01553A4QN01 128 aa11.79□□□□□ -0.52
HIF3A-219ENST00000600879 GRXCR2A6NFK2 248 aa11.79□□□□□ -0.52
HIF3A-219ENST00000600879 PITPNM1O00562 1244 aa11.79□□□□□ -0.52
HIF3A-219ENST00000600879 NFIBO00712 420 aa11.79□□□□□ -0.52
HIF3A-219ENST00000600879 RNF113AO15541 343 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms