RNA–Protein interactions for RNA: ENST00000600236.1

HIF3A-217, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 313 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-217ENST00000600236 ITGA7Q13683 1181 aa13.39□□□□□ -0.27
HIF3A-217ENST00000600236 DUSP28Q4G0W2 176 aa13.39□□□□□ -0.27
HIF3A-217ENST00000600236 TAPT1Q6NXT6 567 aa13.39□□□□□ -0.27
HIF3A-217ENST00000600236 PSRC1Q6PGN9 363 aaPredicted RBP13.39□□□□□ -0.27
HIF3A-217ENST00000600236 PNMA1Q8ND90 353 aa13.39□□□□□ -0.27
HIF3A-217ENST00000600236 DNERQ8NFT8 737 aa13.39□□□□□ -0.27
HIF3A-217ENST00000600236 GUCD1Q96NT3 240 aa13.39□□□□□ -0.27
HIF3A-217ENST00000600236 ZSCAN10Q96SZ4 725 aaPredicted RBP13.39□□□□□ -0.27
HIF3A-217ENST00000600236 PPP1R12CQ9BZL4 782 aa13.39□□□□□ -0.27
HIF3A-217ENST00000600236 MAF1Q9H063 256 aa13.39□□□□□ -0.27
HIF3A-217ENST00000600236 CNNM2Q9H8M5 875 aa13.39□□□□□ -0.27
HIF3A-217ENST00000600236 PDGFCQ9NRA1 345 aa13.39□□□□□ -0.27
HIF3A-217ENST00000600236 POLR3EQ9NVU0 708 aa13.39□□□□□ -0.27
HIF3A-217ENST00000600236 ASTN1O14525 1302 aa13.39□□□□□ -0.27
HIF3A-217ENST00000600236 B4E1Z4 1266 aa13.38□□□□□ -0.27
HIF3A-217ENST00000600236 NKRFO15226 690 aaKnown RBP eCLIP13.38□□□□□ -0.27
HIF3A-217ENST00000600236 DHX16O60231 1041 aaKnown RBP13.38□□□□□ -0.27
HIF3A-217ENST00000600236 GOLGA8HP0CJ92 632 aa13.38□□□□□ -0.27
HIF3A-217ENST00000600236 CPT1AP50416 773 aa13.38□□□□□ -0.27
HIF3A-217ENST00000600236 EPHB4P54760 987 aa13.38□□□□□ -0.27
HIF3A-217ENST00000600236 RPS6P62753 249 aaKnown RBP13.38□□□□□ -0.27
HIF3A-217ENST00000600236 ASPRV1Q53RT3 343 aa13.38□□□□□ -0.27
HIF3A-217ENST00000600236 SLC30A10Q6XR72 485 aa13.38□□□□□ -0.27
HIF3A-217ENST00000600236 CLEC4DQ8WXI8 215 aa13.38□□□□□ -0.27
HIF3A-217ENST00000600236 PURBQ96QR8 312 aaKnown RBP13.38□□□□□ -0.27
HIF3A-217ENST00000600236 UBAC1Q9BSL1 405 aa13.38□□□□□ -0.27
HIF3A-217ENST00000600236 WDR11Q9BZH6 1224 aa13.38□□□□□ -0.27
HIF3A-217ENST00000600236 MTIF3Q9H2K0 278 aaKnown RBP13.38□□□□□ -0.27
HIF3A-217ENST00000600236 SEMA6BQ9H3T3 888 aa13.38□□□□□ -0.27
HIF3A-217ENST00000600236 GPHNQ9NQX3 736 aaPredicted RBP13.38□□□□□ -0.27
HIF3A-217ENST00000600236 RANBP2P49792 3224 aaKnown RBP13.38□□□□□ -0.27
HIF3A-217ENST00000600236 DLL1O00548 723 aa13.37□□□□□ -0.27
HIF3A-217ENST00000600236 PARP1P09874 1014 aaKnown RBP13.37□□□□□ -0.27
HIF3A-217ENST00000600236 PPP2R5BQ15173 497 aa13.37□□□□□ -0.27
HIF3A-217ENST00000600236 CDC37Q16543 378 aaPredicted RBP13.37□□□□□ -0.27
HIF3A-217ENST00000600236 USH1GQ495M9 461 aa13.37□□□□□ -0.27
HIF3A-217ENST00000600236 MCF2L2Q86YR7 1114 aa13.37□□□□□ -0.27
HIF3A-217ENST00000600236 SLC43A3Q8NBI5 491 aa13.37□□□□□ -0.27
HIF3A-217ENST00000600236 RGS22Q8NE09 1264 aa13.37□□□□□ -0.27
HIF3A-217ENST00000600236 SCFD2Q8WU76 684 aa13.37□□□□□ -0.27
HIF3A-217ENST00000600236 RUFY2Q8WXA3 655 aa13.37□□□□□ -0.27
HIF3A-217ENST00000600236 ANKS1AQ92625 1134 aa13.37□□□□□ -0.27
HIF3A-217ENST00000600236 DDX49Q9Y6V7 483 aaKnown RBP13.37□□□□□ -0.27
HIF3A-217ENST00000600236 SMCHD1A6NHR9 2005 aa13.37□□□□□ -0.27
HIF3A-217ENST00000600236 TNKSO95271 1327 aa13.37□□□□□ -0.27
HIF3A-217ENST00000600236 ABCB11O95342 1321 aa13.37□□□□□ -0.27
HIF3A-217ENST00000600236 RBM47A0AV96 593 aaKnown RBP13.36□□□□□ -0.27
HIF3A-217ENST00000600236 CD4P01730 458 aa13.36□□□□□ -0.27
HIF3A-217ENST00000600236 SUPT20HL2P0C7V6 817 aa13.36□□□□□ -0.27
HIF3A-217ENST00000600236 CSF2RAP15509 400 aa13.36□□□□□ -0.27
HIF3A-217ENST00000600236 TRDNQ13061 729 aa13.36□□□□□ -0.27
HIF3A-217ENST00000600236 IFIT1BQ5T764 474 aaKnown RBP13.36□□□□□ -0.27
HIF3A-217ENST00000600236 OR6J1Q8NGC5 347 aa13.36□□□□□ -0.27
HIF3A-217ENST00000600236 CDX2Q99626 313 aaPredicted RBP13.36□□□□□ -0.27
HIF3A-217ENST00000600236 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.36□□□□□ -0.27
HIF3A-217ENST00000600236 UBA5Q9GZZ9 404 aa13.36□□□□□ -0.27
HIF3A-217ENST00000600236 HIPK3Q9H422 1215 aa13.36□□□□□ -0.27
HIF3A-217ENST00000600236 ZSWIM5Q9P217 1185 aa13.36□□□□□ -0.27
HIF3A-217ENST00000600236 KPNA6O60684 536 aa13.35□□□□□ -0.27
HIF3A-217ENST00000600236 MYL3P08590 195 aa13.35□□□□□ -0.27
HIF3A-217ENST00000600236 EDNRBP24530 442 aa13.35□□□□□ -0.27
HIF3A-217ENST00000600236 TTLL4Q14679 1199 aa13.35□□□□□ -0.27
HIF3A-217ENST00000600236 TTC22Q5TAA0 569 aa13.35□□□□□ -0.27
HIF3A-217ENST00000600236 ENAHQ8N8S7 591 aaPredicted RBP13.35□□□□□ -0.27
HIF3A-217ENST00000600236 MTG1Q9BT17 334 aaPredicted RBP13.35□□□□□ -0.27
HIF3A-217ENST00000600236 IL23AQ9NPF7 189 aa13.35□□□□□ -0.27
HIF3A-217ENST00000600236 MRPL11Q9Y3B7 192 aaKnown RBP13.35□□□□□ -0.27
HIF3A-217ENST00000600236 LAMA3Q16787 3333 aa13.34□□□□□ -0.27
HIF3A-217ENST00000600236 B4GALT4O60513 344 aa13.34□□□□□ -0.27
HIF3A-217ENST00000600236 FOSL2P15408 326 aa13.34□□□□□ -0.27
HIF3A-217ENST00000600236 DNAJB2P25686 324 aa13.34□□□□□ -0.27
HIF3A-217ENST00000600236 CYP2C18P33260 490 aa13.34□□□□□ -0.27
HIF3A-217ENST00000600236 PSMC6P62333 389 aa13.34□□□□□ -0.27
HIF3A-217ENST00000600236 TMEM240Q5SV17 173 aa13.34□□□□□ -0.27
HIF3A-217ENST00000600236 FBXO11Q86XK2 927 aa13.34□□□□□ -0.27
HIF3A-217ENST00000600236 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.34□□□□□ -0.27
HIF3A-217ENST00000600236 RPUSD2Q8IZ73 545 aaKnown RBP13.34□□□□□ -0.27
HIF3A-217ENST00000600236 ADGRF4Q8IZF3 695 aa13.34□□□□□ -0.27
HIF3A-217ENST00000600236 NSUN6Q8TEA1 469 aaKnown RBP13.34□□□□□ -0.27
HIF3A-217ENST00000600236 TTYH1Q9H313 450 aaPredicted RBP13.34□□□□□ -0.27
HIF3A-217ENST00000600236 SZT2Q5T011 3432 aa13.33□□□□□ -0.27
HIF3A-217ENST00000600236 LRRC37A2A6NM11 1700 aa13.33□□□□□ -0.27
HIF3A-217ENST00000600236 ERICH2A1L162 156 aa13.33□□□□□ -0.28
HIF3A-217ENST00000600236 FGBP02675 491 aa13.33□□□□□ -0.28
HIF3A-217ENST00000600236 ACRP10323 421 aa13.33□□□□□ -0.28
HIF3A-217ENST00000600236 TXNP10599 105 aaKnown RBP13.33□□□□□ -0.28
HIF3A-217ENST00000600236 PTGS1P23219 599 aa13.33□□□□□ -0.28
HIF3A-217ENST00000600236 PURAQ00577 322 aaKnown RBP13.33□□□□□ -0.28
HIF3A-217ENST00000600236 TRAF1Q13077 416 aa13.33□□□□□ -0.28
HIF3A-217ENST00000600236 QRICH1Q2TAL8 776 aa13.33□□□□□ -0.28
HIF3A-217ENST00000600236 FAM47CQ5HY64 1035 aa13.33□□□□□ -0.28
HIF3A-217ENST00000600236 TMEM63BQ5T3F8 832 aa13.33□□□□□ -0.28
HIF3A-217ENST00000600236 ZNF365Q70YC5 407 aa13.33□□□□□ -0.28
HIF3A-217ENST00000600236 MAFAQ8NHW3 353 aaPredicted RBP13.33□□□□□ -0.28
HIF3A-217ENST00000600236 MYLIPQ8WY64 445 aa13.33□□□□□ -0.28
HIF3A-217ENST00000600236 TIFAQ96CG3 184 aa13.33□□□□□ -0.28
HIF3A-217ENST00000600236 AMNQ9BXJ7 453 aa13.33□□□□□ -0.28
HIF3A-217ENST00000600236 ALDH8A1Q9H2A2 487 aaPredicted RBP13.33□□□□□ -0.28
HIF3A-217ENST00000600236 CPVLQ9H3G5 476 aa13.33□□□□□ -0.28
HIF3A-217ENST00000600236 VAT1LQ9HCJ6 419 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms