RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 TNPO2O14787 897 aaKnown RBP14.09□□□□□ -0.15
TGFB1-204ENST00000600196 OPLAHO14841 1288 aa14.09□□□□□ -0.15
TGFB1-204ENST00000600196 STAM2O75886 525 aa14.09□□□□□ -0.15
TGFB1-204ENST00000600196 MMP1P03956 469 aa14.09□□□□□ -0.15
TGFB1-204ENST00000600196 CLK2P49760 499 aaKnown RBP14.09□□□□□ -0.15
TGFB1-204ENST00000600196 MORN1Q5T089 497 aa14.09□□□□□ -0.15
TGFB1-204ENST00000600196 KRT40Q6A162 431 aa14.09□□□□□ -0.15
TGFB1-204ENST00000600196 BLIDQ8IZY5 108 aa14.09□□□□□ -0.15
TGFB1-204ENST00000600196 ANKRD35Q8N283 1001 aa14.09□□□□□ -0.15
TGFB1-204ENST00000600196 USP6NLQ92738 828 aa14.09□□□□□ -0.15
TGFB1-204ENST00000600196 MMP19Q99542 508 aa14.09□□□□□ -0.15
TGFB1-204ENST00000600196 NAP1L4Q99733 375 aaKnown RBP14.09□□□□□ -0.15
TGFB1-204ENST00000600196 NUDT12Q9BQG2 462 aa14.09□□□□□ -0.15
TGFB1-204ENST00000600196 PORCNQ9H237 461 aa14.09□□□□□ -0.15
TGFB1-204ENST00000600196 A1CFQ9NQ94 594 aaKnown RBP14.09□□□□□ -0.15
TGFB1-204ENST00000600196 H3BQV1 296 aa14.08□□□□□ -0.16
TGFB1-204ENST00000600196 M0R2N6 131 aa14.08□□□□□ -0.16
TGFB1-204ENST00000600196 U2AF2P26368 475 aaKnown RBP eCLIP14.08□□□□□ -0.16
TGFB1-204ENST00000600196 PSMC4P43686 418 aa14.08□□□□□ -0.16
TGFB1-204ENST00000600196 CTCFP49711 727 aaPredicted RBP14.08□□□□□ -0.16
TGFB1-204ENST00000600196 SNAP25P60880 206 aa14.08□□□□□ -0.16
TGFB1-204ENST00000600196 RPS6P62753 249 aaKnown RBP14.08□□□□□ -0.16
TGFB1-204ENST00000600196 MUM1L1Q5H9M0 696 aa14.08□□□□□ -0.16
TGFB1-204ENST00000600196 IFFO2Q5TF58 517 aa14.08□□□□□ -0.16
TGFB1-204ENST00000600196 KRT25Q7Z3Z0 450 aa14.08□□□□□ -0.16
TGFB1-204ENST00000600196 REXO1Q8N1G1 1221 aaKnown RBP14.08□□□□□ -0.16
TGFB1-204ENST00000600196 FAM133AQ8N9E0 248 aa14.08□□□□□ -0.16
TGFB1-204ENST00000600196 NSUN6Q8TEA1 469 aaKnown RBP14.08□□□□□ -0.16
TGFB1-204ENST00000600196 GPKOWQ92917 476 aaPredicted RBP eCLIP14.08□□□□□ -0.16
TGFB1-204ENST00000600196 IPO9Q96P70 1041 aaKnown RBP14.08□□□□□ -0.16
TGFB1-204ENST00000600196 R3HDMLQ9H3Y0 253 aa14.08□□□□□ -0.16
TGFB1-204ENST00000600196 EFCC1Q9HA90 598 aa14.08□□□□□ -0.16
TGFB1-204ENST00000600196 VPS54Q9P1Q0 977 aa14.08□□□□□ -0.16
TGFB1-204ENST00000600196 NRBP1Q9UHY1 535 aa14.08□□□□□ -0.16
TGFB1-204ENST00000600196 GJD2Q9UKL4 321 aa14.08□□□□□ -0.16
TGFB1-204ENST00000600196 CIZ1Q9ULV3 898 aaPredicted RBP14.08□□□□□ -0.16
TGFB1-204ENST00000600196 MYH6P13533 1939 aa14.07□□□□□ -0.16
TGFB1-204ENST00000600196 COL11A1P12107 1806 aaPredicted RBP14.07□□□□□ -0.16
TGFB1-204ENST00000600196 hCG_1642624A0A1W2PR95 340 aa14.07□□□□□ -0.16
TGFB1-204ENST00000600196 ASB14A6NK59 587 aa14.07□□□□□ -0.16
TGFB1-204ENST00000600196 POTEB2H3BUK9 544 aa14.07□□□□□ -0.16
TGFB1-204ENST00000600196 NFIBO00712 420 aa14.07□□□□□ -0.16
TGFB1-204ENST00000600196 CFBP00751 764 aa14.07□□□□□ -0.16
TGFB1-204ENST00000600196 SYT1P21579 422 aa14.07□□□□□ -0.16
TGFB1-204ENST00000600196 KRT2P35908 639 aa14.07□□□□□ -0.16
TGFB1-204ENST00000600196 RGS2P41220 211 aa14.07□□□□□ -0.16
TGFB1-204ENST00000600196 TRAPPC10P48553 1259 aa14.07□□□□□ -0.16
TGFB1-204ENST00000600196 USP11P51784 963 aa14.07□□□□□ -0.16
TGFB1-204ENST00000600196 NUCB2P80303 420 aa14.07□□□□□ -0.16
TGFB1-204ENST00000600196 MAP2K5Q13163 448 aa14.07□□□□□ -0.16
TGFB1-204ENST00000600196 ORC2Q13416 577 aaPredicted RBP14.07□□□□□ -0.16
TGFB1-204ENST00000600196 BAATQ14032 418 aaPredicted RBP14.07□□□□□ -0.16
TGFB1-204ENST00000600196 PKN2Q16513 984 aaKnown RBP14.07□□□□□ -0.16
TGFB1-204ENST00000600196 TYW1BQ6NUM6 668 aa14.07□□□□□ -0.16
TGFB1-204ENST00000600196 MAMDC4Q6UXC1 1216 aa14.07□□□□□ -0.16
TGFB1-204ENST00000600196 SYTL5Q8TDW5 730 aaPredicted RBP14.07□□□□□ -0.16
TGFB1-204ENST00000600196 MORC4Q8TE76 937 aa14.07□□□□□ -0.16
TGFB1-204ENST00000600196 PIBF1Q8WXW3 757 aa14.07□□□□□ -0.16
TGFB1-204ENST00000600196 ZSCAN16Q9H4T2 348 aaPredicted RBP14.07□□□□□ -0.16
TGFB1-204ENST00000600196 FRMPD4Q14CM0 1322 aa14.07□□□□□ -0.16
TGFB1-204ENST00000600196 ZNF236Q9UL36 1845 aa14.06□□□□□ -0.16
TGFB1-204ENST00000600196 SPDYE3A6NKU9 549 aa14.06□□□□□ -0.16
TGFB1-204ENST00000600196 MAFGO15525 162 aa14.06□□□□□ -0.16
TGFB1-204ENST00000600196 STX6O43752 255 aa14.06□□□□□ -0.16
TGFB1-204ENST00000600196 CYP3A4P08684 503 aa14.06□□□□□ -0.16
TGFB1-204ENST00000600196 NPY5RQ15761 445 aa14.06□□□□□ -0.16
TGFB1-204ENST00000600196 ZNF792Q3KQV3 632 aa14.06□□□□□ -0.16
TGFB1-204ENST00000600196 OLFML2BQ68BL8 750 aa14.06□□□□□ -0.16
TGFB1-204ENST00000600196 MOXD1Q6UVY6 613 aa14.06□□□□□ -0.16
TGFB1-204ENST00000600196 NSMFQ6X4W1 530 aa14.06□□□□□ -0.16
TGFB1-204ENST00000600196 BRAPQ7Z569 592 aa14.06□□□□□ -0.16
TGFB1-204ENST00000600196 DPP9Q86TI2 863 aa14.06□□□□□ -0.16
TGFB1-204ENST00000600196 PXYLP1Q8TE99 480 aa14.06□□□□□ -0.16
TGFB1-204ENST00000600196 ZNF296Q8WUU4 475 aaPredicted RBP14.06□□□□□ -0.16
TGFB1-204ENST00000600196 HOMER2Q9NSB8 354 aa14.06□□□□□ -0.16
TGFB1-204ENST00000600196 ADORA2AP29274 412 aa14.05□□□□□ -0.16
TGFB1-204ENST00000600196 ATL3Q6DD88 541 aa14.05□□□□□ -0.16
TGFB1-204ENST00000600196 DIS3L2Q8IYB7 885 aaKnown RBP14.05□□□□□ -0.16
TGFB1-204ENST00000600196 TNFRSF25Q93038 417 aa14.05□□□□□ -0.16
TGFB1-204ENST00000600196 TRIM47Q96LD4 638 aa14.05□□□□□ -0.16
TGFB1-204ENST00000600196 AIFM3Q96NN9 605 aa14.05□□□□□ -0.16
TGFB1-204ENST00000600196 SRRDQ9UH36 339 aa14.05□□□□□ -0.16
TGFB1-204ENST00000600196 PCDHA6Q9UN73 950 aa14.05□□□□□ -0.16
TGFB1-204ENST00000600196 PCDHA8Q9Y5H6 950 aa14.05□□□□□ -0.16
TGFB1-204ENST00000600196 RPTORQ8N122 1335 aa14.05□□□□□ -0.16
TGFB1-204ENST00000600196 CCDC194A0A1B0GVG4 234 aa14.04□□□□□ -0.16
TGFB1-204ENST00000600196 IGHA2P01877 340 aa14.04□□□□□ -0.16
TGFB1-204ENST00000600196 CAPN2P17655 700 aa14.04□□□□□ -0.16
TGFB1-204ENST00000600196 EDNRBP24530 442 aa14.04□□□□□ -0.16
TGFB1-204ENST00000600196 CIITAP33076 1130 aa14.04□□□□□ -0.16
TGFB1-204ENST00000600196 DDIT3P35638 169 aa14.04□□□□□ -0.16
TGFB1-204ENST00000600196 SREBF1P36956 1147 aa14.04□□□□□ -0.16
TGFB1-204ENST00000600196 SLC4A3P48751 1232 aa14.04□□□□□ -0.16
TGFB1-204ENST00000600196 NONOQ15233 471 aaKnown RBP eCLIP14.04□□□□□ -0.16
TGFB1-204ENST00000600196 WDR78Q5VTH9 848 aa14.04□□□□□ -0.16
TGFB1-204ENST00000600196 KCNV1Q6PIU1 500 aa14.04□□□□□ -0.16
TGFB1-204ENST00000600196 NIPA1Q7RTP0 329 aa14.04□□□□□ -0.16
TGFB1-204ENST00000600196 VSIG10LQ86VR7 867 aa14.04□□□□□ -0.16
TGFB1-204ENST00000600196 NOSTRINQ8IVI9 506 aa14.04□□□□□ -0.16
TGFB1-204ENST00000600196 CRYGNQ8WXF5 182 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms