RNA–Protein interactions for RNA: ENST00000598502.5

TRPM4-209, Transcript of transient receptor potential cation channel subfamily M member 4, humanhuman

TSL 1 (best)

Gene TRPM4, Length 3,695 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4-209ENST00000598502 USP17L3A6NCW0 530 aa17.27■□□□□ 0.36
TRPM4-209ENST00000598502 USP17L4A6NCW7 530 aa17.27■□□□□ 0.36
TRPM4-209ENST00000598502 CHUKO15111 745 aa17.27■□□□□ 0.36
TRPM4-209ENST00000598502 EZRP15311 586 aaKnown RBP17.27■□□□□ 0.36
TRPM4-209ENST00000598502 ARHGAP25P42331 645 aa17.27■□□□□ 0.36
TRPM4-209ENST00000598502 USP17L1Q7RTZ2 530 aa17.27■□□□□ 0.36
TRPM4-209ENST00000598502 TGFBRAP1Q8WUH2 860 aa17.27■□□□□ 0.36
TRPM4-209ENST00000598502 FAM184BQ9ULE4 1060 aa17.27■□□□□ 0.36
TRPM4-209ENST00000598502 KCNJ18B7U540 433 aa17.27■□□□□ 0.36
TRPM4-209ENST00000598502 ELF1P32519 619 aa17.27■□□□□ 0.36
TRPM4-209ENST00000598502 KCNJ12Q14500 433 aa17.27■□□□□ 0.36
TRPM4-209ENST00000598502 NFIXQ14938 502 aa17.27■□□□□ 0.36
TRPM4-209ENST00000598502 CCDC40Q4G0X9 1142 aa17.27■□□□□ 0.36
TRPM4-209ENST00000598502 TMTC3Q6ZXV5 915 aa17.27■□□□□ 0.36
TRPM4-209ENST00000598502 MAPKAPK5Q8IW41 473 aa17.27■□□□□ 0.36
TRPM4-209ENST00000598502 CCDC43Q96MW1 224 aaKnown RBP17.27■□□□□ 0.36
TRPM4-209ENST00000598502 EHD2Q9NZN4 543 aa17.27■□□□□ 0.36
TRPM4-209ENST00000598502 DMGDHQ9UI17 866 aaKnown RBP17.27■□□□□ 0.36
TRPM4-209ENST00000598502 GOLGA8HP0CJ92 632 aa17.27■□□□□ 0.35
TRPM4-209ENST00000598502 MMP14P50281 582 aa17.27■□□□□ 0.35
TRPM4-209ENST00000598502 CCDC51Q96ER9 411 aa17.27■□□□□ 0.35
TRPM4-209ENST00000598502 NARFQ9UHQ1 456 aa17.27■□□□□ 0.35
TRPM4-209ENST00000598502 MEFVO15553 781 aaPredicted RBP17.26■□□□□ 0.35
TRPM4-209ENST00000598502 PRPF3O43395 683 aaKnown RBP17.26■□□□□ 0.35
TRPM4-209ENST00000598502 PPP1R12BO60237 982 aaPredicted RBP17.26■□□□□ 0.35
TRPM4-209ENST00000598502 LDHBP07195 334 aaKnown RBP17.26■□□□□ 0.35
TRPM4-209ENST00000598502 KRT83P78385 493 aa17.26■□□□□ 0.35
TRPM4-209ENST00000598502 VAT1LQ9HCJ6 419 aa17.26■□□□□ 0.35
TRPM4-209ENST00000598502 TTC26A0AVF1 554 aa17.26■□□□□ 0.35
TRPM4-209ENST00000598502 GOLGA8KD6RF30 607 aa17.26■□□□□ 0.35
TRPM4-209ENST00000598502 SKAP2O75563 359 aaPredicted RBP17.26■□□□□ 0.35
TRPM4-209ENST00000598502 CYLC1P35663 651 aaPredicted RBP17.26■□□□□ 0.35
TRPM4-209ENST00000598502 GRIK5Q16478 980 aa17.26■□□□□ 0.35
TRPM4-209ENST00000598502 TRIM47Q96LD4 638 aa17.26■□□□□ 0.35
TRPM4-209ENST00000598502 PHF20Q9BVI0 1012 aa17.26■□□□□ 0.35
TRPM4-209ENST00000598502 KLC4Q9NSK0 619 aa17.26■□□□□ 0.35
TRPM4-209ENST00000598502 MYO1AQ9UBC5 1043 aa17.26■□□□□ 0.35
TRPM4-209ENST00000598502 ANAPC4Q9UJX5 808 aa17.26■□□□□ 0.35
TRPM4-209ENST00000598502 STAG2Q8N3U4 1231 aa17.26■□□□□ 0.35
TRPM4-209ENST00000598502 SH3RF3Q8TEJ3 882 aaPredicted RBP17.26■□□□□ 0.35
TRPM4-209ENST00000598502 NELFBQ8WX92 580 aa17.26■□□□□ 0.35
TRPM4-209ENST00000598502 RBM28Q9NW13 759 aaKnown RBP17.26■□□□□ 0.35
TRPM4-209ENST00000598502 ACTN4O43707 911 aaKnown RBP17.25■□□□□ 0.35
TRPM4-209ENST00000598502 PAX7P23759 505 aa17.25■□□□□ 0.35
TRPM4-209ENST00000598502 AARSP49588 968 aaKnown RBP eCLIP17.25■□□□□ 0.35
TRPM4-209ENST00000598502 MDM2Q00987 491 aaPredicted RBP17.25■□□□□ 0.35
TRPM4-209ENST00000598502 C8orf74Q6P047 294 aa17.25■□□□□ 0.35
TRPM4-209ENST00000598502 ANKRD2Q9GZV1 360 aa17.25■□□□□ 0.35
TRPM4-209ENST00000598502 RPS6KA4O75676 772 aa17.25■□□□□ 0.35
TRPM4-209ENST00000598502 VAV2P52735 878 aa17.25■□□□□ 0.35
TRPM4-209ENST00000598502 BAIAP2L1Q9UHR4 511 aa17.25■□□□□ 0.35
TRPM4-209ENST00000598502 AGPSO00116 658 aa17.25■□□□□ 0.35
TRPM4-209ENST00000598502 SCG2P13521 617 aa17.25■□□□□ 0.35
TRPM4-209ENST00000598502 BARGINQ6ZT62 677 aa17.25■□□□□ 0.35
TRPM4-209ENST00000598502 HEATR3Q7Z4Q2 680 aa17.25■□□□□ 0.35
TRPM4-209ENST00000598502 TRIML1Q8N9V2 468 aa17.25■□□□□ 0.35
TRPM4-209ENST00000598502 EHBP1Q8NDI1 1231 aa17.25■□□□□ 0.35
TRPM4-209ENST00000598502 CCDC42Q96M95 316 aa17.25■□□□□ 0.35
TRPM4-209ENST00000598502 GOLGB1Q14789 3259 aaKnown RBP17.24■□□□□ 0.35
TRPM4-209ENST00000598502 UBAP1LF5GYI3 381 aa17.24■□□□□ 0.35
TRPM4-209ENST00000598502 PDE2AO00408 941 aaPredicted RBP17.24■□□□□ 0.35
TRPM4-209ENST00000598502 KIF1CO43896 1103 aaKnown RBP17.24■□□□□ 0.35
TRPM4-209ENST00000598502 CALM1P0DP23 149 aa17.24■□□□□ 0.35
TRPM4-209ENST00000598502 CALM2P0DP24 149 aa17.24■□□□□ 0.35
TRPM4-209ENST00000598502 CALM3P0DP25 149 aa17.24■□□□□ 0.35
TRPM4-209ENST00000598502 FUT2Q10981 343 aa17.24■□□□□ 0.35
TRPM4-209ENST00000598502 COL16A1Q07092 1604 aaPredicted RBP17.24■□□□□ 0.35
TRPM4-209ENST00000598502 TSPY3P0CV98 308 aa17.24■□□□□ 0.35
TRPM4-209ENST00000598502 TSPY8P0CW00 308 aa17.24■□□□□ 0.35
TRPM4-209ENST00000598502 GSCP56915 257 aaPredicted RBP17.24■□□□□ 0.35
TRPM4-209ENST00000598502 PAK1Q13153 545 aa17.24■□□□□ 0.35
TRPM4-209ENST00000598502 TRAPPC11Q7Z392 1133 aa17.24■□□□□ 0.35
TRPM4-209ENST00000598502 AKR1B10O60218 316 aa17.24■□□□□ 0.35
TRPM4-209ENST00000598502 KCTD19Q17RG1 926 aaPredicted RBP17.24■□□□□ 0.35
TRPM4-209ENST00000598502 FAM196AQ6ZSG2 479 aa17.24■□□□□ 0.35
TRPM4-209ENST00000598502 ZNF444Q8N0Y2 327 aaPredicted RBP17.24■□□□□ 0.35
TRPM4-209ENST00000598502 PNMA1Q8ND90 353 aa17.24■□□□□ 0.35
TRPM4-209ENST00000598502 PAGE5Q96GU1 130 aa17.24■□□□□ 0.35
TRPM4-209ENST00000598502 LACRTQ9GZZ8 138 aa17.24■□□□□ 0.35
TRPM4-209ENST00000598502 KRT26Q7Z3Y9 468 aa17.23■□□□□ 0.35
TRPM4-209ENST00000598502 CNTNAP5Q8WYK1 1306 aa17.23■□□□□ 0.35
TRPM4-209ENST00000598502 CHD4Q14839 1912 aa17.23■□□□□ 0.35
TRPM4-209ENST00000598502 TRIM49BA6NDI0 452 aa17.23■□□□□ 0.35
TRPM4-209ENST00000598502 USO1O60763 962 aaKnown RBP17.23■□□□□ 0.35
TRPM4-209ENST00000598502 TACC1O75410 805 aa17.23■□□□□ 0.35
TRPM4-209ENST00000598502 ZKSCAN4Q969J2 545 aaPredicted RBP17.23■□□□□ 0.35
TRPM4-209ENST00000598502 FAM237AA0A1B0GTK4 181 aa17.23■□□□□ 0.35
TRPM4-209ENST00000598502 PDHBP11177 359 aa17.23■□□□□ 0.35
TRPM4-209ENST00000598502 MTIF2P46199 727 aaKnown RBP17.23■□□□□ 0.35
TRPM4-209ENST00000598502 SPAG1Q07617 926 aa17.23■□□□□ 0.35
TRPM4-209ENST00000598502 ATP8A2Q9NTI2 1148 aa17.23■□□□□ 0.35
TRPM4-209ENST00000598502 NFU1Q9UMS0 254 aa17.23■□□□□ 0.35
TRPM4-209ENST00000598502 AMOTL1Q8IY63 956 aa17.22■□□□□ 0.35
TRPM4-209ENST00000598502 CNBD1Q8NA66 436 aa17.22■□□□□ 0.35
TRPM4-209ENST00000598502 RNPC3Q96LT9 517 aaKnown RBP17.22■□□□□ 0.35
TRPM4-209ENST00000598502 PLCD4Q9BRC7 762 aa17.22■□□□□ 0.35
TRPM4-209ENST00000598502 GDAQ9Y2T3 454 aa17.22■□□□□ 0.35
TRPM4-209ENST00000598502 A0A1B0GUA9 196 aa17.22■□□□□ 0.35
TRPM4-209ENST00000598502 F8W031 263 aaPredicted RBP17.22■□□□□ 0.35
TRPM4-209ENST00000598502 AMPD2Q01433 879 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms