RNA–Protein interactions for RNA: ENST00000592388.1

VAT1-209, Transcript of vesicle amine transport 1, humanhuman

TSL 5

Gene VAT1, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-209ENST00000592388 IQCF3P0C7M6 154 aa8.9□□□□□ -0.98
VAT1-209ENST00000592388 SUPT20HL2P0C7V6 817 aa8.9□□□□□ -0.98
VAT1-209ENST00000592388 RFC2P35250 354 aa8.9□□□□□ -0.98
VAT1-209ENST00000592388 LTBRP36941 435 aa8.9□□□□□ -0.98
VAT1-209ENST00000592388 NBL1P41271 181 aa8.9□□□□□ -0.98
VAT1-209ENST00000592388 SLC4A3P48751 1232 aa8.9□□□□□ -0.98
VAT1-209ENST00000592388 TNFAIP2Q03169 654 aa8.9□□□□□ -0.98
VAT1-209ENST00000592388 GABPAQ06546 454 aa8.9□□□□□ -0.98
VAT1-209ENST00000592388 PTPROQ16827 1216 aa8.9□□□□□ -0.98
VAT1-209ENST00000592388 TIGD5Q53EQ6 642 aa8.9□□□□□ -0.98
VAT1-209ENST00000592388 SLC9C2Q5TAH2 1124 aa8.9□□□□□ -0.98
VAT1-209ENST00000592388 FRMD5Q7Z6J6 570 aa8.9□□□□□ -0.98
VAT1-209ENST00000592388 CLASRPQ8N2M8 674 aaKnown RBP8.9□□□□□ -0.98
VAT1-209ENST00000592388 RETREG2Q8NC44 543 aa8.9□□□□□ -0.98
VAT1-209ENST00000592388 COL26A1Q96A83 441 aa8.9□□□□□ -0.98
VAT1-209ENST00000592388 KIF1BPQ96EK5 621 aa8.9□□□□□ -0.98
VAT1-209ENST00000592388 RAD9AQ99638 391 aa8.9□□□□□ -0.98
VAT1-209ENST00000592388 SEZ6LQ9BYH1 1024 aa8.9□□□□□ -0.98
VAT1-209ENST00000592388 EHD4Q9H223 541 aa8.9□□□□□ -0.98
VAT1-209ENST00000592388 BOLA2Q9H3K6 86 aa8.9□□□□□ -0.98
VAT1-209ENST00000592388 ARMT1Q9H993 441 aa8.9□□□□□ -0.98
VAT1-209ENST00000592388 FBXO28Q9NVF7 368 aa8.9□□□□□ -0.98
VAT1-209ENST00000592388 CTNNA3Q9UI47 895 aa8.9□□□□□ -0.98
VAT1-209ENST00000592388 DDX19BQ9UMR2 479 aa8.9□□□□□ -0.98
VAT1-209ENST00000592388 MYO7AQ13402 2215 aa8.9□□□□□ -0.98
VAT1-209ENST00000592388 CYP2D7A0A087X1C5 515 aa8.89□□□□□ -0.99
VAT1-209ENST00000592388 RBAK-RBAKDNI3L0D1 243 aa8.89□□□□□ -0.99
VAT1-209ENST00000592388 PRKAB2O43741 272 aa8.89□□□□□ -0.99
VAT1-209ENST00000592388 SMARCA5O60264 1052 aaPredicted RBP8.89□□□□□ -0.99
VAT1-209ENST00000592388 ZEB2O60315 1214 aa8.89□□□□□ -0.99
VAT1-209ENST00000592388 BAIAP3O94812 1187 aa8.89□□□□□ -0.99
VAT1-209ENST00000592388 MBD4O95243 580 aa8.89□□□□□ -0.99
VAT1-209ENST00000592388 GJB5O95377 273 aa8.89□□□□□ -0.99
VAT1-209ENST00000592388 POLR3DP05423 398 aaPredicted RBP8.89□□□□□ -0.99
VAT1-209ENST00000592388 NKX3-2P78367 333 aa8.89□□□□□ -0.99
VAT1-209ENST00000592388 DLX2Q07687 328 aaPredicted RBP8.89□□□□□ -0.99
VAT1-209ENST00000592388 SIGLEC14Q08ET2 396 aa8.89□□□□□ -0.99
VAT1-209ENST00000592388 MKRN4PQ13434 485 aaPredicted RBP8.89□□□□□ -0.99
VAT1-209ENST00000592388 HSP90AB4PQ58FF6 505 aa8.89□□□□□ -0.99
VAT1-209ENST00000592388 ARMCX2Q7L311 632 aa8.89□□□□□ -0.99
VAT1-209ENST00000592388 RPAINQ86UA6 219 aa8.89□□□□□ -0.99
VAT1-209ENST00000592388 TLK2Q86UE8 772 aa8.89□□□□□ -0.99
VAT1-209ENST00000592388 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.89□□□□□ -0.99
VAT1-209ENST00000592388 PPP1R13LQ8WUF5 828 aa8.89□□□□□ -0.99
VAT1-209ENST00000592388 DYNLL2Q96FJ2 89 aa8.89□□□□□ -0.99
VAT1-209ENST00000592388 AP5M1Q9H0R1 490 aa8.89□□□□□ -0.99
VAT1-209ENST00000592388 DCP1AQ9NPI6 582 aaPredicted RBP8.89□□□□□ -0.99
VAT1-209ENST00000592388 MCM9Q9NXL9 1143 aa8.89□□□□□ -0.99
VAT1-209ENST00000592388 RCAN3Q9UKA8 241 aa8.89□□□□□ -0.99
VAT1-209ENST00000592388 RALYQ9UKM9 306 aaKnown RBP8.89□□□□□ -0.99
VAT1-209ENST00000592388 PTPRSQ13332 1948 aa8.89□□□□□ -0.99
VAT1-209ENST00000592388 VPS13AQ96RL7 3174 aa8.88□□□□□ -0.99
VAT1-209ENST00000592388 EP300Q09472 2414 aaPredicted RBP8.88□□□□□ -0.99
VAT1-209ENST00000592388 DNAJC25-GNG10A0A024R161 153 aa8.88□□□□□ -0.99
VAT1-209ENST00000592388 VWA5AO00534 786 aa8.88□□□□□ -0.99
VAT1-209ENST00000592388 GALR2O43603 387 aaPredicted RBP8.88□□□□□ -0.99
VAT1-209ENST00000592388 IGSF3O75054 1194 aa8.88□□□□□ -0.99
VAT1-209ENST00000592388 HMMRO75330 724 aa8.88□□□□□ -0.99
VAT1-209ENST00000592388 ADD2P35612 726 aa8.88□□□□□ -0.99
VAT1-209ENST00000592388 TTF1Q15361 905 aaPredicted RBP8.88□□□□□ -0.99
VAT1-209ENST00000592388 NBPF20Q3BBV1 942 aa8.88□□□□□ -0.99
VAT1-209ENST00000592388 FAM47CQ5HY64 1035 aa8.88□□□□□ -0.99
VAT1-209ENST00000592388 ZNF467Q7Z7K2 595 aaPredicted RBP8.88□□□□□ -0.99
VAT1-209ENST00000592388 TTC6Q86TZ1 520 aa8.88□□□□□ -0.99
VAT1-209ENST00000592388 CERS3Q8IU89 383 aa8.88□□□□□ -0.99
VAT1-209ENST00000592388 RPAP2Q8IXW5 612 aaPredicted RBP8.88□□□□□ -0.99
VAT1-209ENST00000592388 CCDC144CPQ8IYA2 1237 aa8.88□□□□□ -0.99
VAT1-209ENST00000592388 CRNKL1Q9BZJ0 848 aaKnown RBP8.88□□□□□ -0.99
VAT1-209ENST00000592388 KATNBL1Q9H079 304 aa8.88□□□□□ -0.99
VAT1-209ENST00000592388 NSUN3Q9H649 340 aaKnown RBP8.88□□□□□ -0.99
VAT1-209ENST00000592388 PAG1Q9NWQ8 432 aa8.88□□□□□ -0.99
VAT1-209ENST00000592388 ZNF214Q9UL59 606 aaPredicted RBP8.88□□□□□ -0.99
VAT1-209ENST00000592388 ADAMTS5Q9UNA0 930 aa8.88□□□□□ -0.99
VAT1-209ENST00000592388 GNEQ9Y223 722 aaKnown RBP8.88□□□□□ -0.99
VAT1-209ENST00000592388 RIPK3Q9Y572 518 aa8.88□□□□□ -0.99
VAT1-209ENST00000592388 PDGFBP01127 241 aaPredicted RBP8.87□□□□□ -0.99
VAT1-209ENST00000592388 MS4A1P11836 297 aa8.87□□□□□ -0.99
VAT1-209ENST00000592388 AKR1B1P15121 316 aa8.87□□□□□ -0.99
VAT1-209ENST00000592388 COPB2P35606 906 aa8.87□□□□□ -0.99
VAT1-209ENST00000592388 SMAD4Q13485 552 aaKnown RBP8.87□□□□□ -0.99
VAT1-209ENST00000592388 COL19A1Q14993 1142 aa8.87□□□□□ -0.99
VAT1-209ENST00000592388 ST3GAL2Q16842 350 aa8.87□□□□□ -0.99
VAT1-209ENST00000592388 TSHZ3Q63HK5 1081 aa8.87□□□□□ -0.99
VAT1-209ENST00000592388 ASIC4Q96FT7 647 aa8.87□□□□□ -0.99
VAT1-209ENST00000592388 FGD4Q96M96 766 aa8.87□□□□□ -0.99
VAT1-209ENST00000592388 VCPKMTQ9H867 229 aa8.87□□□□□ -0.99
VAT1-209ENST00000592388 LCTP09848 1927 aa8.87□□□□□ -0.99
VAT1-209ENST00000592388 SIP14410 1827 aa8.87□□□□□ -0.99
VAT1-209ENST00000592388 PITPNM1O00562 1244 aa8.86□□□□□ -0.99
VAT1-209ENST00000592388 WDR46O15213 610 aaKnown RBP8.86□□□□□ -0.99
VAT1-209ENST00000592388 RAB11FIP3O75154 756 aa8.86□□□□□ -0.99
VAT1-209ENST00000592388 SMPD1P17405 629 aa8.86□□□□□ -0.99
VAT1-209ENST00000592388 ATP5JP18859 108 aa8.86□□□□□ -0.99
VAT1-209ENST00000592388 GPM6BQ13491 265 aa8.86□□□□□ -0.99
VAT1-209ENST00000592388 EPC2Q52LR7 807 aa8.86□□□□□ -0.99
VAT1-209ENST00000592388 TMEM63BQ5T3F8 832 aa8.86□□□□□ -0.99
VAT1-209ENST00000592388 SNRNP48Q6IEG0 339 aaKnown RBP8.86□□□□□ -0.99
VAT1-209ENST00000592388 ANKRD35Q8N283 1001 aa8.86□□□□□ -0.99
VAT1-209ENST00000592388 REPS2Q8NFH8 660 aa8.86□□□□□ -0.99
VAT1-209ENST00000592388 HAUS7Q99871 368 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms