RNA–Protein interactions for RNA: ENST00000592176.1

APOC1-207, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-207ENST00000592176 MYL3P08590 195 aa10.85□□□□□ -0.67
APOC1-207ENST00000592176 CPT1AP50416 773 aa10.85□□□□□ -0.67
APOC1-207ENST00000592176 PPARAQ07869 468 aa10.85□□□□□ -0.67
APOC1-207ENST00000592176 BAATQ14032 418 aaPredicted RBP10.85□□□□□ -0.67
APOC1-207ENST00000592176 TSHZ3Q63HK5 1081 aa10.85□□□□□ -0.67
APOC1-207ENST00000592176 PHOSPHO2Q8TCD6 241 aa10.85□□□□□ -0.67
APOC1-207ENST00000592176 SEC62Q99442 399 aaKnown RBP10.85□□□□□ -0.67
APOC1-207ENST00000592176 FTOQ9C0B1 505 aaKnown RBP eCLIP10.85□□□□□ -0.67
APOC1-207ENST00000592176 TRMT13Q9NUP7 481 aaKnown RBP10.85□□□□□ -0.67
APOC1-207ENST00000592176 MTMR7Q9Y216 660 aa10.85□□□□□ -0.67
APOC1-207ENST00000592176 TNKSO95271 1327 aa10.84□□□□□ -0.67
APOC1-207ENST00000592176 CHD9Q3L8U1 2897 aa10.84□□□□□ -0.67
APOC1-207ENST00000592176 MYH8P13535 1937 aa10.84□□□□□ -0.67
APOC1-207ENST00000592176 RBM47A0AV96 593 aaKnown RBP10.84□□□□□ -0.67
APOC1-207ENST00000592176 KIF28PB7ZC32 967 aa10.84□□□□□ -0.67
APOC1-207ENST00000592176 ICAM1P05362 532 aa10.84□□□□□ -0.67
APOC1-207ENST00000592176 CA3P07451 260 aa10.84□□□□□ -0.67
APOC1-207ENST00000592176 RFC2P35250 354 aa10.84□□□□□ -0.67
APOC1-207ENST00000592176 KCNQ1P51787 676 aa10.84□□□□□ -0.67
APOC1-207ENST00000592176 PURAQ00577 322 aaKnown RBP10.84□□□□□ -0.67
APOC1-207ENST00000592176 NBPF20Q3BBV1 942 aa10.84□□□□□ -0.67
APOC1-207ENST00000592176 BRDTQ58F21 947 aaPredicted RBP10.84□□□□□ -0.67
APOC1-207ENST00000592176 FAM47CQ5HY64 1035 aa10.84□□□□□ -0.67
APOC1-207ENST00000592176 OR6J1Q8NGC5 347 aa10.84□□□□□ -0.67
APOC1-207ENST00000592176 MTG1Q9BT17 334 aaPredicted RBP10.84□□□□□ -0.67
APOC1-207ENST00000592176 DCTPP1Q9H773 170 aa10.84□□□□□ -0.67
APOC1-207ENST00000592176 INCENPQ9NQS7 918 aa10.84□□□□□ -0.67
APOC1-207ENST00000592176 IL17RBQ9NRM6 502 aa10.84□□□□□ -0.67
APOC1-207ENST00000592176 COG5Q9UP83 839 aa10.84□□□□□ -0.67
APOC1-207ENST00000592176 PLIN4Q96Q06 1357 aa10.84□□□□□ -0.67
APOC1-207ENST00000592176 LOC102724159A0A0B4J2E5 919 aa10.83□□□□□ -0.68
APOC1-207ENST00000592176 RANBP6O60518 1105 aaKnown RBP10.83□□□□□ -0.68
APOC1-207ENST00000592176 KPNA6O60684 536 aa10.83□□□□□ -0.68
APOC1-207ENST00000592176 IQCF3P0C7M6 154 aa10.83□□□□□ -0.68
APOC1-207ENST00000592176 SLC16A2P36021 539 aa10.83□□□□□ -0.68
APOC1-207ENST00000592176 ALDH5A1P51649 535 aaPredicted RBP10.83□□□□□ -0.68
APOC1-207ENST00000592176 CTDSPL2Q05D32 466 aa10.83□□□□□ -0.68
APOC1-207ENST00000592176 PWP2Q15269 919 aaKnown RBP10.83□□□□□ -0.68
APOC1-207ENST00000592176 DCAF4Q8WV16 495 aa10.83□□□□□ -0.68
APOC1-207ENST00000592176 ARNTL2Q8WYA1 636 aa10.83□□□□□ -0.68
APOC1-207ENST00000592176 SLC9A7Q96T83 725 aa10.83□□□□□ -0.68
APOC1-207ENST00000592176 PTPDC1A2A3K4 754 aa10.82□□□□□ -0.68
APOC1-207ENST00000592176 TLL1O43897 1013 aa10.82□□□□□ -0.68
APOC1-207ENST00000592176 NMT2O60551 498 aa10.82□□□□□ -0.68
APOC1-207ENST00000592176 TAP1Q03518 808 aa10.82□□□□□ -0.68
APOC1-207ENST00000592176 PTPN11Q06124 597 aaPredicted RBP10.82□□□□□ -0.68
APOC1-207ENST00000592176 PDE4DQ08499 809 aa10.82□□□□□ -0.68
APOC1-207ENST00000592176 CCDC96Q2M329 555 aa10.82□□□□□ -0.68
APOC1-207ENST00000592176 ZMYM1Q5SVZ6 1142 aa10.82□□□□□ -0.68
APOC1-207ENST00000592176 SYDE2Q5VT97 1194 aa10.82□□□□□ -0.68
APOC1-207ENST00000592176 TTBK2Q6IQ55 1244 aa10.82□□□□□ -0.68
APOC1-207ENST00000592176 NFRKBQ6P4R8 1299 aa10.82□□□□□ -0.68
APOC1-207ENST00000592176 BTNL9Q6UXG8 535 aa10.82□□□□□ -0.68
APOC1-207ENST00000592176 HERC6Q8IVU3 1022 aa10.82□□□□□ -0.68
APOC1-207ENST00000592176 HLA-CQ95604 372 aa10.82□□□□□ -0.68
APOC1-207ENST00000592176 MPHOSPH6Q99547 160 aaKnown RBP10.82□□□□□ -0.68
APOC1-207ENST00000592176 FSD1Q9BTV5 496 aa10.82□□□□□ -0.68
APOC1-207ENST00000592176 RANBP17Q9H2T7 1088 aaKnown RBP10.82□□□□□ -0.68
APOC1-207ENST00000592176 EPHX3Q9H6B9 360 aa10.82□□□□□ -0.68
APOC1-207ENST00000592176 NOD1Q9Y239 953 aa10.82□□□□□ -0.68
APOC1-207ENST00000592176 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.82□□□□□ -0.68
APOC1-207ENST00000592176 GREB1LQ9C091 1923 aaPredicted RBP10.82□□□□□ -0.68
APOC1-207ENST00000592176 EPOPA6NHQ4 379 aa10.81□□□□□ -0.68
APOC1-207ENST00000592176 A6NJR5 290 aa10.81□□□□□ -0.68
APOC1-207ENST00000592176 B4DLN1 442 aa10.81□□□□□ -0.68
APOC1-207ENST00000592176 PITPNM1O00562 1244 aa10.81□□□□□ -0.68
APOC1-207ENST00000592176 NFIBO00712 420 aa10.81□□□□□ -0.68
APOC1-207ENST00000592176 NKRFO15226 690 aaKnown RBP eCLIP10.81□□□□□ -0.68
APOC1-207ENST00000592176 CALML3P27482 149 aa10.81□□□□□ -0.68
APOC1-207ENST00000592176 MRPL12P52815 198 aaKnown RBP10.81□□□□□ -0.68
APOC1-207ENST00000592176 CHMP4BP1P59074 171 aa10.81□□□□□ -0.68
APOC1-207ENST00000592176 BFSP2Q13515 415 aa10.81□□□□□ -0.68
APOC1-207ENST00000592176 C20orf194Q5TEA3 1177 aa10.81□□□□□ -0.68
APOC1-207ENST00000592176 KRT40Q6A162 431 aa10.81□□□□□ -0.68
APOC1-207ENST00000592176 PPP1R13LQ8WUF5 828 aa10.81□□□□□ -0.68
APOC1-207ENST00000592176 LRFN3Q9BTN0 628 aa10.81□□□□□ -0.68
APOC1-207ENST00000592176 GPCPD1Q9NPB8 672 aa10.81□□□□□ -0.68
APOC1-207ENST00000592176 RCAN3Q9UKA8 241 aa10.81□□□□□ -0.68
APOC1-207ENST00000592176 PNMA2Q9UL42 364 aa10.81□□□□□ -0.68
APOC1-207ENST00000592176 MYH7P12883 1935 aa10.81□□□□□ -0.68
APOC1-207ENST00000592176 TTC41PQ6P2S7 1318 aa10.81□□□□□ -0.68
APOC1-207ENST00000592176 RAD50Q92878 1312 aa10.81□□□□□ -0.68
APOC1-207ENST00000592176 TXNP10599 105 aaKnown RBP10.8□□□□□ -0.68
APOC1-207ENST00000592176 TOP1P11387 765 aaKnown RBP10.8□□□□□ -0.68
APOC1-207ENST00000592176 NOVP48745 357 aa10.8□□□□□ -0.68
APOC1-207ENST00000592176 GRB10Q13322 594 aa10.8□□□□□ -0.68
APOC1-207ENST00000592176 PPP2R5BQ15173 497 aa10.8□□□□□ -0.68
APOC1-207ENST00000592176 RNF207Q6ZRF8 634 aa10.8□□□□□ -0.68
APOC1-207ENST00000592176 RASGRP2Q7LDG7 609 aa10.8□□□□□ -0.68
APOC1-207ENST00000592176 SCFD2Q8WU76 684 aa10.8□□□□□ -0.68
APOC1-207ENST00000592176 CLEC4DQ8WXI8 215 aa10.8□□□□□ -0.68
APOC1-207ENST00000592176 COPS5Q92905 334 aa10.8□□□□□ -0.68
APOC1-207ENST00000592176 ZBED2Q9BTP6 218 aa10.8□□□□□ -0.68
APOC1-207ENST00000592176 TOMM22Q9NS69 142 aa10.8□□□□□ -0.68
APOC1-207ENST00000592176 ANAPC4Q9UJX5 808 aa10.8□□□□□ -0.68
APOC1-207ENST00000592176 ARIH1Q9Y4X5 557 aaPredicted RBP10.8□□□□□ -0.68
APOC1-207ENST00000592176 ORC4O43929 436 aa10.79□□□□□ -0.68
APOC1-207ENST00000592176 BAIAP3O94812 1187 aa10.79□□□□□ -0.68
APOC1-207ENST00000592176 ARHGEF15O94989 841 aa10.79□□□□□ -0.68
APOC1-207ENST00000592176 KCNJ6P48051 423 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms