RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 HTTP42858 3142 aa13.86□□□□□ -0.19
APOC1-206ENST00000590334 MYH15Q9Y2K3 1946 aa13.86□□□□□ -0.19
APOC1-206ENST00000590334 SMCO2A6NFE2 343 aa13.86□□□□□ -0.19
APOC1-206ENST00000590334 MEIS2O14770 477 aa13.86□□□□□ -0.19
APOC1-206ENST00000590334 TNPO2O14787 897 aaKnown RBP13.86□□□□□ -0.19
APOC1-206ENST00000590334 CALML3P27482 149 aa13.86□□□□□ -0.19
APOC1-206ENST00000590334 GNA11P29992 359 aa13.86□□□□□ -0.19
APOC1-206ENST00000590334 CTCFP49711 727 aaPredicted RBP13.86□□□□□ -0.19
APOC1-206ENST00000590334 CLK2P49760 499 aaKnown RBP13.86□□□□□ -0.19
APOC1-206ENST00000590334 ADCY7P51828 1080 aa13.86□□□□□ -0.19
APOC1-206ENST00000590334 MRPL12P52815 198 aaKnown RBP13.86□□□□□ -0.19
APOC1-206ENST00000590334 KCTD2Q14681 263 aa13.86□□□□□ -0.19
APOC1-206ENST00000590334 ARHGEF6Q15052 776 aa13.86□□□□□ -0.19
APOC1-206ENST00000590334 NPY5RQ15761 445 aa13.86□□□□□ -0.19
APOC1-206ENST00000590334 WDR78Q5VTH9 848 aa13.86□□□□□ -0.19
APOC1-206ENST00000590334 GALNT17Q6IS24 598 aa13.86□□□□□ -0.19
APOC1-206ENST00000590334 RNF207Q6ZRF8 634 aa13.86□□□□□ -0.19
APOC1-206ENST00000590334 ANKRD35Q8N283 1001 aa13.86□□□□□ -0.19
APOC1-206ENST00000590334 DAGLBQ8NCG7 672 aa13.86□□□□□ -0.19
APOC1-206ENST00000590334 SOCS4Q8WXH5 440 aa13.86□□□□□ -0.19
APOC1-206ENST00000590334 TBC1D5Q92609 795 aa13.86□□□□□ -0.19
APOC1-206ENST00000590334 CUL5Q93034 780 aa13.86□□□□□ -0.19
APOC1-206ENST00000590334 GJD2Q9UKL4 321 aa13.86□□□□□ -0.19
APOC1-206ENST00000590334 KIAA1217Q5T5P2 1943 aa13.86□□□□□ -0.19
APOC1-206ENST00000590334 GCOM1H8Y6P7 765 aaPredicted RBP13.85□□□□□ -0.19
APOC1-206ENST00000590334 M0R2N6 131 aa13.85□□□□□ -0.19
APOC1-206ENST00000590334 CFBP00751 764 aa13.85□□□□□ -0.19
APOC1-206ENST00000590334 HOXC6P09630 235 aa13.85□□□□□ -0.19
APOC1-206ENST00000590334 POLR2MP0CAP2 368 aa13.85□□□□□ -0.19
APOC1-206ENST00000590334 ADORA2AP29274 412 aa13.85□□□□□ -0.19
APOC1-206ENST00000590334 RPS6P62753 249 aaKnown RBP13.85□□□□□ -0.19
APOC1-206ENST00000590334 BAATQ14032 418 aaPredicted RBP13.85□□□□□ -0.19
APOC1-206ENST00000590334 MCTP2Q6DN12 878 aa13.85□□□□□ -0.19
APOC1-206ENST00000590334 NSMFQ6X4W1 530 aa13.85□□□□□ -0.19
APOC1-206ENST00000590334 SLC30A10Q6XR72 485 aa13.85□□□□□ -0.19
APOC1-206ENST00000590334 FAM133AQ8N9E0 248 aa13.85□□□□□ -0.19
APOC1-206ENST00000590334 FBXO18Q8NFZ0 1043 aa13.85□□□□□ -0.19
APOC1-206ENST00000590334 BICD2Q8TD16 824 aa13.85□□□□□ -0.19
APOC1-206ENST00000590334 C8orf76Q96K31 380 aa13.85□□□□□ -0.19
APOC1-206ENST00000590334 CWC22Q9HCG8 908 aaKnown RBP13.85□□□□□ -0.19
APOC1-206ENST00000590334 C6orf50Q9HD87 102 aa13.85□□□□□ -0.19
APOC1-206ENST00000590334 GJB4Q9NTQ9 266 aa13.85□□□□□ -0.19
APOC1-206ENST00000590334 DIS3Q9Y2L1 958 aaKnown RBP13.85□□□□□ -0.19
APOC1-206ENST00000590334 MCM3APO60318 1980 aa13.85□□□□□ -0.19
APOC1-206ENST00000590334 MMP1P03956 469 aa13.84□□□□□ -0.19
APOC1-206ENST00000590334 HSP90AA1P07900 732 aaKnown RBP13.84□□□□□ -0.19
APOC1-206ENST00000590334 PRMT2P55345 433 aa13.84□□□□□ -0.19
APOC1-206ENST00000590334 NLRP5P59047 1200 aa13.84□□□□□ -0.19
APOC1-206ENST00000590334 MAP2K5Q13163 448 aa13.84□□□□□ -0.19
APOC1-206ENST00000590334 TRIM29Q14134 588 aa13.84□□□□□ -0.19
APOC1-206ENST00000590334 ZNF792Q3KQV3 632 aa13.84□□□□□ -0.19
APOC1-206ENST00000590334 KRT40Q6A162 431 aa13.84□□□□□ -0.19
APOC1-206ENST00000590334 SYTL5Q8TDW5 730 aaPredicted RBP13.84□□□□□ -0.19
APOC1-206ENST00000590334 NUDT12Q9BQG2 462 aa13.84□□□□□ -0.19
APOC1-206ENST00000590334 COL20A1Q9P218 1284 aa13.84□□□□□ -0.19
APOC1-206ENST00000590334 SRRDQ9UH36 339 aa13.84□□□□□ -0.19
APOC1-206ENST00000590334 PCDHA4Q9UN74 947 aa13.84□□□□□ -0.19
APOC1-206ENST00000590334 KCNJ14Q9UNX9 436 aa13.84□□□□□ -0.19
APOC1-206ENST00000590334 FRMPD4Q14CM0 1322 aa13.84□□□□□ -0.19
APOC1-206ENST00000590334 LOC102724159A0A0B4J2E5 919 aa13.83□□□□□ -0.2
APOC1-206ENST00000590334 POTEB2H3BUK9 544 aa13.83□□□□□ -0.2
APOC1-206ENST00000590334 ADAMTS3O15072 1205 aa13.83□□□□□ -0.2
APOC1-206ENST00000590334 COBLO75128 1261 aa13.83□□□□□ -0.2
APOC1-206ENST00000590334 XRCC5P13010 732 aaKnown RBP13.83□□□□□ -0.2
APOC1-206ENST00000590334 PDCP20941 246 aa13.83□□□□□ -0.2
APOC1-206ENST00000590334 HOXD10P28358 340 aa13.83□□□□□ -0.2
APOC1-206ENST00000590334 HOXA13P31271 388 aaPredicted RBP13.83□□□□□ -0.2
APOC1-206ENST00000590334 CNTN2Q02246 1040 aa13.83□□□□□ -0.2
APOC1-206ENST00000590334 IRF5Q13568 498 aa13.83□□□□□ -0.2
APOC1-206ENST00000590334 PWP2Q15269 919 aaKnown RBP13.83□□□□□ -0.2
APOC1-206ENST00000590334 USP17L6PQ6QN14 398 aa13.83□□□□□ -0.2
APOC1-206ENST00000590334 ZNF467Q7Z7K2 595 aaPredicted RBP13.83□□□□□ -0.2
APOC1-206ENST00000590334 BLIDQ8IZY5 108 aa13.83□□□□□ -0.2
APOC1-206ENST00000590334 DNERQ8NFT8 737 aa13.83□□□□□ -0.2
APOC1-206ENST00000590334 FGD4Q96M96 766 aa13.83□□□□□ -0.2
APOC1-206ENST00000590334 FOXD4L1Q9NU39 408 aa13.83□□□□□ -0.2
APOC1-206ENST00000590334 GABRQQ9UN88 632 aa13.83□□□□□ -0.2
APOC1-206ENST00000590334 ASTN1O14525 1302 aa13.83□□□□□ -0.2
APOC1-206ENST00000590334 SOWAHBA6NEL2 793 aa13.82□□□□□ -0.2
APOC1-206ENST00000590334 FOSP01100 380 aaPredicted RBP13.82□□□□□ -0.2
APOC1-206ENST00000590334 IGHA2P01877 340 aa13.82□□□□□ -0.2
APOC1-206ENST00000590334 PGK2P07205 417 aa13.82□□□□□ -0.2
APOC1-206ENST00000590334 PDIA4P13667 645 aaKnown RBP13.82□□□□□ -0.2
APOC1-206ENST00000590334 RGS2P41220 211 aa13.82□□□□□ -0.2
APOC1-206ENST00000590334 LBX1P52954 281 aa13.82□□□□□ -0.2
APOC1-206ENST00000590334 PRKCZQ05513 592 aa13.82□□□□□ -0.2
APOC1-206ENST00000590334 AP3B2Q13367 1082 aa13.82□□□□□ -0.2
APOC1-206ENST00000590334 UBE2SQ16763 222 aa13.82□□□□□ -0.2
APOC1-206ENST00000590334 LARP1BQ659C4 914 aaKnown RBP13.82□□□□□ -0.2
APOC1-206ENST00000590334 OTOP1Q7RTM1 612 aa13.82□□□□□ -0.2
APOC1-206ENST00000590334 DPP9Q86TI2 863 aa13.82□□□□□ -0.2
APOC1-206ENST00000590334 REXO1Q8N1G1 1221 aaKnown RBP13.82□□□□□ -0.2
APOC1-206ENST00000590334 APBA2Q99767 749 aa13.82□□□□□ -0.2
APOC1-206ENST00000590334 SLC5A4Q9NY91 659 aa13.82□□□□□ -0.2
APOC1-206ENST00000590334 RPTORQ8N122 1335 aa13.82□□□□□ -0.2
APOC1-206ENST00000590334 ECM2O94769 699 aaPredicted RBP13.81□□□□□ -0.2
APOC1-206ENST00000590334 SYT1P21579 422 aa13.81□□□□□ -0.2
APOC1-206ENST00000590334 KRT2P35908 639 aa13.81□□□□□ -0.2
APOC1-206ENST00000590334 FLT3LGP49771 235 aa13.81□□□□□ -0.2
APOC1-206ENST00000590334 MAMDC4Q6UXC1 1216 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms