RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 SPRYD3Q8NCJ5 442 aa15.65■□□□□ 0.1
VMP1-210ENST00000589823 BICD2Q8TD16 824 aa15.65■□□□□ 0.1
VMP1-210ENST00000589823 SOCS4Q8WXH5 440 aa15.65■□□□□ 0.1
VMP1-210ENST00000589823 C8orf76Q96K31 380 aa15.65■□□□□ 0.1
VMP1-210ENST00000589823 NUDT12Q9BQG2 462 aa15.65■□□□□ 0.1
VMP1-210ENST00000589823 ZMYND12Q9H0C1 365 aa15.65■□□□□ 0.1
VMP1-210ENST00000589823 RIC8AQ9NPQ8 531 aa15.65■□□□□ 0.1
VMP1-210ENST00000589823 MAP3K20Q9NYL2 800 aaKnown RBP15.65■□□□□ 0.1
VMP1-210ENST00000589823 CYP39A1Q9NYL5 469 aa15.65■□□□□ 0.1
VMP1-210ENST00000589823 POTEB2H3BUK9 544 aa15.64■□□□□ 0.09
VMP1-210ENST00000589823 OPLAHO14841 1288 aa15.64■□□□□ 0.09
VMP1-210ENST00000589823 GNRH1P01148 92 aa15.64■□□□□ 0.09
VMP1-210ENST00000589823 CTGFP29279 349 aa15.64■□□□□ 0.09
VMP1-210ENST00000589823 GALNT17Q6IS24 598 aa15.64■□□□□ 0.09
VMP1-210ENST00000589823 SLC30A10Q6XR72 485 aa15.64■□□□□ 0.09
VMP1-210ENST00000589823 DPP9Q86TI2 863 aa15.64■□□□□ 0.09
VMP1-210ENST00000589823 TBC1D5Q92609 795 aa15.64■□□□□ 0.09
VMP1-210ENST00000589823 BRMS1Q9HCU9 246 aa15.64■□□□□ 0.09
VMP1-210ENST00000589823 SLC5A4Q9NY91 659 aa15.64■□□□□ 0.09
VMP1-210ENST00000589823 PDCP20941 246 aa15.63■□□□□ 0.09
VMP1-210ENST00000589823 HSD17B4P51659 736 aa15.63■□□□□ 0.09
VMP1-210ENST00000589823 LBX1P52954 281 aa15.63■□□□□ 0.09
VMP1-210ENST00000589823 RPS6P62753 249 aaKnown RBP15.63■□□□□ 0.09
VMP1-210ENST00000589823 GHRHRQ02643 423 aa15.63■□□□□ 0.09
VMP1-210ENST00000589823 MAP2K5Q13163 448 aa15.63■□□□□ 0.09
VMP1-210ENST00000589823 SAFBQ15424 915 aaKnown RBP eCLIP15.63■□□□□ 0.09
VMP1-210ENST00000589823 MORN1Q5T089 497 aa15.63■□□□□ 0.09
VMP1-210ENST00000589823 LARP1BQ659C4 914 aaKnown RBP15.63■□□□□ 0.09
VMP1-210ENST00000589823 KRT40Q6A162 431 aa15.63■□□□□ 0.09
VMP1-210ENST00000589823 PHF20Q9BVI0 1012 aa15.63■□□□□ 0.09
VMP1-210ENST00000589823 KCNJ14Q9UNX9 436 aa15.63■□□□□ 0.09
VMP1-210ENST00000589823 PLXNB2O15031 1838 aa15.62■□□□□ 0.09
VMP1-210ENST00000589823 SMCHD1A6NHR9 2005 aa15.62■□□□□ 0.09
VMP1-210ENST00000589823 H3BQV1 296 aa15.62■□□□□ 0.09
VMP1-210ENST00000589823 PIK3CDO00329 1044 aa15.62■□□□□ 0.09
VMP1-210ENST00000589823 PGK2P07205 417 aa15.62■□□□□ 0.09
VMP1-210ENST00000589823 HOXA13P31271 388 aaPredicted RBP15.62■□□□□ 0.09
VMP1-210ENST00000589823 RGS2P41220 211 aa15.62■□□□□ 0.09
VMP1-210ENST00000589823 GUCY1B3Q02153 619 aa15.62■□□□□ 0.09
VMP1-210ENST00000589823 UBE2SQ16763 222 aa15.62■□□□□ 0.09
VMP1-210ENST00000589823 IFFO2Q5TF58 517 aa15.62■□□□□ 0.09
VMP1-210ENST00000589823 MCTP2Q6DN12 878 aa15.62■□□□□ 0.09
VMP1-210ENST00000589823 USP17L6PQ6QN14 398 aa15.62■□□□□ 0.09
VMP1-210ENST00000589823 FCHSD1Q86WN1 690 aa15.62■□□□□ 0.09
VMP1-210ENST00000589823 SYTL5Q8TDW5 730 aaPredicted RBP15.62■□□□□ 0.09
VMP1-210ENST00000589823 SHISA4Q96DD7 197 aa15.62■□□□□ 0.09
VMP1-210ENST00000589823 GJB4Q9NTQ9 266 aa15.62■□□□□ 0.09
VMP1-210ENST00000589823 SRRDQ9UH36 339 aa15.62■□□□□ 0.09
VMP1-210ENST00000589823 PCDHA4Q9UN74 947 aa15.62■□□□□ 0.09
VMP1-210ENST00000589823 MGAMO43451 1857 aa15.61■□□□□ 0.09
VMP1-210ENST00000589823 DNAJC25-GNG10A0A024R161 153 aa15.61■□□□□ 0.09
VMP1-210ENST00000589823 SPDYE3A6NKU9 549 aa15.61■□□□□ 0.09
VMP1-210ENST00000589823 MEIS2O14770 477 aa15.61■□□□□ 0.09
VMP1-210ENST00000589823 FOSP01100 380 aaPredicted RBP15.61■□□□□ 0.09
VMP1-210ENST00000589823 MMP1P03956 469 aa15.61■□□□□ 0.09
VMP1-210ENST00000589823 KRT2P35908 639 aa15.61■□□□□ 0.09
VMP1-210ENST00000589823 PRMT2P55345 433 aa15.61■□□□□ 0.09
VMP1-210ENST00000589823 CNTN2Q02246 1040 aa15.61■□□□□ 0.09
VMP1-210ENST00000589823 PRKCZQ05513 592 aa15.61■□□□□ 0.09
VMP1-210ENST00000589823 BLIDQ8IZY5 108 aa15.61■□□□□ 0.09
VMP1-210ENST00000589823 REXO1Q8N1G1 1221 aaKnown RBP15.61■□□□□ 0.09
VMP1-210ENST00000589823 DAGLBQ8NCG7 672 aa15.61■□□□□ 0.09
VMP1-210ENST00000589823 FBXO18Q8NFZ0 1043 aa15.61■□□□□ 0.09
VMP1-210ENST00000589823 EHMT1Q9H9B1 1298 aa15.61■□□□□ 0.09
VMP1-210ENST00000589823 BIN2Q9UBW5 565 aaPredicted RBP15.61■□□□□ 0.09
VMP1-210ENST00000589823 ADD3Q9UEY8 706 aaKnown RBP15.61■□□□□ 0.09
VMP1-210ENST00000589823 GJD2Q9UKL4 321 aa15.61■□□□□ 0.09
VMP1-210ENST00000589823 GABRQQ9UN88 632 aa15.61■□□□□ 0.09
VMP1-210ENST00000589823 TRIM17Q9Y577 477 aa15.61■□□□□ 0.09
VMP1-210ENST00000589823 RBBP6Q7Z6E9 1792 aaKnown RBP15.61■□□□□ 0.09
VMP1-210ENST00000589823 ZNF236Q9UL36 1845 aa15.6■□□□□ 0.09
VMP1-210ENST00000589823 B4DLN1 442 aa15.6■□□□□ 0.09
VMP1-210ENST00000589823 COBLO75128 1261 aa15.6■□□□□ 0.09
VMP1-210ENST00000589823 CYP2B6P20813 491 aa15.6■□□□□ 0.09
VMP1-210ENST00000589823 CLK2P49760 499 aaKnown RBP15.6■□□□□ 0.09
VMP1-210ENST00000589823 FLT3LGP49771 235 aa15.6■□□□□ 0.09
VMP1-210ENST00000589823 CAP1Q01518 475 aa15.6■□□□□ 0.09
VMP1-210ENST00000589823 AP3B2Q13367 1082 aa15.6■□□□□ 0.09
VMP1-210ENST00000589823 GNL2Q13823 731 aaKnown RBP15.6■□□□□ 0.09
VMP1-210ENST00000589823 ZNF792Q3KQV3 632 aa15.6■□□□□ 0.09
VMP1-210ENST00000589823 OTOP1Q7RTM1 612 aa15.6■□□□□ 0.09
VMP1-210ENST00000589823 FAM133AQ8N9E0 248 aa15.6■□□□□ 0.09
VMP1-210ENST00000589823 DNERQ8NFT8 737 aa15.6■□□□□ 0.09
VMP1-210ENST00000589823 USP6NLQ92738 828 aa15.6■□□□□ 0.09
VMP1-210ENST00000589823 MPHOSPH6Q99547 160 aaKnown RBP15.6■□□□□ 0.09
VMP1-210ENST00000589823 APBA2Q99767 749 aa15.6■□□□□ 0.09
VMP1-210ENST00000589823 DIS3Q9Y2L1 958 aaKnown RBP15.6■□□□□ 0.09
VMP1-210ENST00000589823 ZSWIM8A7E2V4 1837 aa15.59■□□□□ 0.09
VMP1-210ENST00000589823 HOXC6P09630 235 aa15.59■□□□□ 0.09
VMP1-210ENST00000589823 ARHGEF16Q5VV41 709 aa15.59■□□□□ 0.09
VMP1-210ENST00000589823 JAKMIP3Q5VZ66 844 aa15.59■□□□□ 0.09
VMP1-210ENST00000589823 DIS3L2Q8IYB7 885 aaKnown RBP15.59■□□□□ 0.09
VMP1-210ENST00000589823 RAET1EQ8TD07 263 aa15.59■□□□□ 0.09
VMP1-210ENST00000589823 NSUN6Q8TEA1 469 aaKnown RBP15.59■□□□□ 0.09
VMP1-210ENST00000589823 TAAR1Q96RJ0 339 aa15.59■□□□□ 0.09
VMP1-210ENST00000589823 RMDN3Q96TC7 470 aa15.59■□□□□ 0.09
VMP1-210ENST00000589823 COL20A1Q9P218 1284 aa15.59■□□□□ 0.09
VMP1-210ENST00000589823 PCDHA6Q9UN73 950 aa15.59■□□□□ 0.09
VMP1-210ENST00000589823 PCDHA8Q9Y5H6 950 aa15.59■□□□□ 0.09
VMP1-210ENST00000589823 VPS37CA5D8V6 355 aaPredicted RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms