RNA–Protein interactions for RNA: ENST00000589428.5

R3HDM4-204, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,704 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-204ENST00000589428 MRPL11Q9Y3B7 192 aaKnown RBP24.5■■□□□ 1.51
R3HDM4-204ENST00000589428 NFIBO00712 420 aa24.49■■□□□ 1.51
R3HDM4-204ENST00000589428 COBLO75128 1261 aa24.49■■□□□ 1.51
R3HDM4-204ENST00000589428 PCDHA1Q9Y5I3 950 aa24.49■■□□□ 1.51
R3HDM4-204ENST00000589428 HMGCRP04035 888 aa24.49■■□□□ 1.51
R3HDM4-204ENST00000589428 SYT1P21579 422 aa24.49■■□□□ 1.51
R3HDM4-204ENST00000589428 NPLOC4Q8TAT6 608 aa24.49■■□□□ 1.51
R3HDM4-204ENST00000589428 hCG_1642624A0A1W2PR95 340 aa24.48■■□□□ 1.51
R3HDM4-204ENST00000589428 PPP1R11O60927 126 aaPredicted RBP24.48■■□□□ 1.51
R3HDM4-204ENST00000589428 CLEC4DQ8WXI8 215 aa24.48■■□□□ 1.51
R3HDM4-204ENST00000589428 TRIB2Q92519 343 aa24.48■■□□□ 1.51
R3HDM4-204ENST00000589428 AIFM3Q96NN9 605 aa24.48■■□□□ 1.51
R3HDM4-204ENST00000589428 CHMP5Q9NZZ3 219 aa24.48■■□□□ 1.51
R3HDM4-204ENST00000589428 KIF3AQ9Y496 699 aa24.48■■□□□ 1.51
R3HDM4-204ENST00000589428 SMCHD1A6NHR9 2005 aa24.48■■□□□ 1.51
R3HDM4-204ENST00000589428 ZNFX1Q9P2E3 1918 aaKnown RBP24.47■■□□□ 1.51
R3HDM4-204ENST00000589428 POTEB2H3BUK9 544 aa24.47■■□□□ 1.51
R3HDM4-204ENST00000589428 PRPF3O43395 683 aaKnown RBP24.47■■□□□ 1.51
R3HDM4-204ENST00000589428 UBXN2AP68543 259 aa24.47■■□□□ 1.51
R3HDM4-204ENST00000589428 CCL14Q16627 93 aa24.47■■□□□ 1.51
R3HDM4-204ENST00000589428 ARMC5Q96C12 935 aa24.47■■□□□ 1.51
R3HDM4-204ENST00000589428 ABHD8Q96I13 439 aa24.47■■□□□ 1.51
R3HDM4-204ENST00000589428 DIS3Q9Y2L1 958 aaKnown RBP24.47■■□□□ 1.51
R3HDM4-204ENST00000589428 V9GY48 417 aaPredicted RBP24.47■■□□□ 1.51
R3HDM4-204ENST00000589428 DNAJC25-GNG10A0A024R161 153 aa24.47■■□□□ 1.51
R3HDM4-204ENST00000589428 DEXIO95424 95 aa24.47■■□□□ 1.51
R3HDM4-204ENST00000589428 PDCP20941 246 aa24.47■■□□□ 1.51
R3HDM4-204ENST00000589428 ZNF792Q3KQV3 632 aa24.47■■□□□ 1.51
R3HDM4-204ENST00000589428 LARP1BQ659C4 914 aaKnown RBP24.47■■□□□ 1.51
R3HDM4-204ENST00000589428 MCF2L2Q86YR7 1114 aa24.47■■□□□ 1.51
R3HDM4-204ENST00000589428 MAML3Q96JK9 1138 aa24.47■■□□□ 1.51
R3HDM4-204ENST00000589428 CYP39A1Q9NYL5 469 aa24.47■■□□□ 1.51
R3HDM4-204ENST00000589428 RBBP6Q7Z6E9 1792 aaKnown RBP24.47■■□□□ 1.51
R3HDM4-204ENST00000589428 INHAP05111 366 aa24.46■■□□□ 1.51
R3HDM4-204ENST00000589428 PKN1Q16512 942 aa24.46■■□□□ 1.51
R3HDM4-204ENST00000589428 OLFML2BQ68BL8 750 aa24.46■■□□□ 1.51
R3HDM4-204ENST00000589428 RNF207Q6ZRF8 634 aa24.46■■□□□ 1.51
R3HDM4-204ENST00000589428 PLXNA1Q9UIW2 1896 aa24.46■■□□□ 1.51
R3HDM4-204ENST00000589428 STX6O43752 255 aa24.45■■□□□ 1.5
R3HDM4-204ENST00000589428 FOSBP53539 338 aa24.45■■□□□ 1.5
R3HDM4-204ENST00000589428 AKAP17AQ02040 695 aaKnown RBP24.45■■□□□ 1.5
R3HDM4-204ENST00000589428 MFSD14CQ5VZR4 134 aa24.45■■□□□ 1.5
R3HDM4-204ENST00000589428 ZNF333Q96JL9 665 aa24.45■■□□□ 1.5
R3HDM4-204ENST00000589428 ALG1Q9BT22 464 aa24.45■■□□□ 1.5
R3HDM4-204ENST00000589428 MAF1Q9H063 256 aa24.45■■□□□ 1.5
R3HDM4-204ENST00000589428 RBM27Q9P2N5 1060 aaKnown RBP24.45■■□□□ 1.5
R3HDM4-204ENST00000589428 BAATQ14032 418 aaPredicted RBP24.44■■□□□ 1.5
R3HDM4-204ENST00000589428 RGS22Q8NE09 1264 aa24.44■■□□□ 1.5
R3HDM4-204ENST00000589428 FLRT1Q9NZU1 646 aa24.44■■□□□ 1.5
R3HDM4-204ENST00000589428 ZDHHC9Q9Y397 364 aa24.44■■□□□ 1.5
R3HDM4-204ENST00000589428 CALML3P27482 149 aa24.44■■□□□ 1.5
R3HDM4-204ENST00000589428 RPS6P62753 249 aaKnown RBP24.44■■□□□ 1.5
R3HDM4-204ENST00000589428 SLC30A10Q6XR72 485 aa24.44■■□□□ 1.5
R3HDM4-204ENST00000589428 HEATR3Q7Z4Q2 680 aa24.44■■□□□ 1.5
R3HDM4-204ENST00000589428 FAM133AQ8N9E0 248 aa24.44■■□□□ 1.5
R3HDM4-204ENST00000589428 WASF1Q92558 559 aa24.44■■□□□ 1.5
R3HDM4-204ENST00000589428 GJB4Q9NTQ9 266 aa24.44■■□□□ 1.5
R3HDM4-204ENST00000589428 NUCB2P80303 420 aa24.43■■□□□ 1.5
R3HDM4-204ENST00000589428 MTMR6Q9Y217 621 aa24.43■■□□□ 1.5
R3HDM4-204ENST00000589428 CENPFP49454 3210 aa24.42■■□□□ 1.5
R3HDM4-204ENST00000589428 VPS37CA5D8V6 355 aaPredicted RBP24.42■■□□□ 1.5
R3HDM4-204ENST00000589428 BRD1O95696 1058 aa24.42■■□□□ 1.5
R3HDM4-204ENST00000589428 CNTN2Q02246 1040 aa24.42■■□□□ 1.5
R3HDM4-204ENST00000589428 PFKFB3Q16875 520 aaPredicted RBP24.42■■□□□ 1.5
R3HDM4-204ENST00000589428 ZNF467Q7Z7K2 595 aaPredicted RBP24.42■■□□□ 1.5
R3HDM4-204ENST00000589428 C8orf76Q96K31 380 aa24.42■■□□□ 1.5
R3HDM4-204ENST00000589428 ADD3Q9UEY8 706 aaKnown RBP24.42■■□□□ 1.5
R3HDM4-204ENST00000589428 hCG_1984214I3L0E3 225 aa24.41■■□□□ 1.5
R3HDM4-204ENST00000589428 CFBP00751 764 aa24.41■■□□□ 1.5
R3HDM4-204ENST00000589428 MYCP01106 439 aaPredicted RBP24.41■■□□□ 1.5
R3HDM4-204ENST00000589428 SCG2P13521 617 aa24.41■■□□□ 1.5
R3HDM4-204ENST00000589428 PRKAR2AP13861 404 aaKnown RBP24.41■■□□□ 1.5
R3HDM4-204ENST00000589428 MSL3Q8N5Y2 521 aaKnown RBP24.41■■□□□ 1.5
R3HDM4-204ENST00000589428 ZNF713Q8N859 430 aaPredicted RBP24.41■■□□□ 1.5
R3HDM4-204ENST00000589428 TINF2Q9BSI4 451 aa24.41■■□□□ 1.5
R3HDM4-204ENST00000589428 CYP2C19P33261 490 aa24.41■■□□□ 1.5
R3HDM4-204ENST00000589428 TRIM32Q13049 653 aa24.41■■□□□ 1.5
R3HDM4-204ENST00000589428 GPKOWQ92917 476 aaPredicted RBP eCLIP24.41■■□□□ 1.5
R3HDM4-204ENST00000589428 SHISA4Q96DD7 197 aa24.41■■□□□ 1.5
R3HDM4-204ENST00000589428 GUCY1B3Q02153 619 aa24.4■■□□□ 1.5
R3HDM4-204ENST00000589428 FBXO18Q8NFZ0 1043 aa24.4■■□□□ 1.5
R3HDM4-204ENST00000589428 MAP3K20Q9NYL2 800 aaKnown RBP24.4■■□□□ 1.5
R3HDM4-204ENST00000589428 H3BQV1 296 aa24.39■■□□□ 1.5
R3HDM4-204ENST00000589428 OPLAHO14841 1288 aa24.39■■□□□ 1.5
R3HDM4-204ENST00000589428 IFFO2Q5TF58 517 aa24.39■■□□□ 1.5
R3HDM4-204ENST00000589428 FOXD4L5Q5VV16 416 aaPredicted RBP24.39■■□□□ 1.5
R3HDM4-204ENST00000589428 WWC2Q6AWC2 1192 aa24.39■■□□□ 1.5
R3HDM4-204ENST00000589428 SAMD3Q8N6K7 520 aa24.39■■□□□ 1.5
R3HDM4-204ENST00000589428 FOXD4L4Q8WXT5 416 aaPredicted RBP24.39■■□□□ 1.5
R3HDM4-204ENST00000589428 TBC1D5Q92609 795 aa24.39■■□□□ 1.5
R3HDM4-204ENST00000589428 FGD4Q96M96 766 aa24.39■■□□□ 1.5
R3HDM4-204ENST00000589428 SYNGAP1Q96PV0 1343 aa24.39■■□□□ 1.49
R3HDM4-204ENST00000589428 SOWAHBA6NEL2 793 aa24.38■■□□□ 1.49
R3HDM4-204ENST00000589428 GCOM1H8Y6P7 765 aaPredicted RBP24.38■■□□□ 1.49
R3HDM4-204ENST00000589428 POLR2MP0CAP2 368 aa24.38■■□□□ 1.49
R3HDM4-204ENST00000589428 ZSCAN22P10073 491 aaPredicted RBP24.38■■□□□ 1.49
R3HDM4-204ENST00000589428 PDIA4P13667 645 aaKnown RBP24.38■■□□□ 1.49
R3HDM4-204ENST00000589428 NAPAP54920 295 aa24.38■■□□□ 1.49
R3HDM4-204ENST00000589428 CACNB2Q08289 660 aaPredicted RBP24.38■■□□□ 1.49
R3HDM4-204ENST00000589428 MTFR1Q15390 333 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms