RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 CYP39A1Q9NYL5 469 aa13.98□□□□□ -0.17
DNMT1-218ENST00000589294 DAXXQ9UER7 740 aaPredicted RBP13.98□□□□□ -0.17
DNMT1-218ENST00000589294 GJD2Q9UKL4 321 aa13.98□□□□□ -0.17
DNMT1-218ENST00000589294 DNAJC25-GNG10A0A024R161 153 aa13.97□□□□□ -0.17
DNMT1-218ENST00000589294 MEIS2O14770 477 aa13.97□□□□□ -0.17
DNMT1-218ENST00000589294 CFBP00751 764 aa13.97□□□□□ -0.17
DNMT1-218ENST00000589294 FOSP01100 380 aaPredicted RBP13.97□□□□□ -0.17
DNMT1-218ENST00000589294 TAL1P17542 331 aaPredicted RBP13.97□□□□□ -0.17
DNMT1-218ENST00000589294 CTCFP49711 727 aaPredicted RBP13.97□□□□□ -0.17
DNMT1-218ENST00000589294 RPS6P62753 249 aaKnown RBP13.97□□□□□ -0.17
DNMT1-218ENST00000589294 BAATQ14032 418 aaPredicted RBP13.97□□□□□ -0.17
DNMT1-218ENST00000589294 MORN1Q5T089 497 aa13.97□□□□□ -0.17
DNMT1-218ENST00000589294 NSMFQ6X4W1 530 aa13.97□□□□□ -0.17
DNMT1-218ENST00000589294 DAGLBQ8NCG7 672 aa13.97□□□□□ -0.17
DNMT1-218ENST00000589294 TBC1D5Q92609 795 aa13.97□□□□□ -0.17
DNMT1-218ENST00000589294 TSKSQ9UJT2 592 aa13.97□□□□□ -0.17
DNMT1-218ENST00000589294 PCDHA4Q9UN74 947 aa13.97□□□□□ -0.17
DNMT1-218ENST00000589294 DIS3Q9Y2L1 958 aaKnown RBP13.97□□□□□ -0.17
DNMT1-218ENST00000589294 MYH6P13533 1939 aa13.96□□□□□ -0.17
DNMT1-218ENST00000589294 POTEB2H3BUK9 544 aa13.96□□□□□ -0.17
DNMT1-218ENST00000589294 FOXN1O15353 648 aa13.96□□□□□ -0.17
DNMT1-218ENST00000589294 HOXC6P09630 235 aa13.96□□□□□ -0.17
DNMT1-218ENST00000589294 HSPA1AP0DMV8 641 aaKnown RBP13.96□□□□□ -0.17
DNMT1-218ENST00000589294 HSPA1BP0DMV9 641 aaKnown RBP13.96□□□□□ -0.17
DNMT1-218ENST00000589294 ADORA2AP29274 412 aa13.96□□□□□ -0.17
DNMT1-218ENST00000589294 CTGFP29279 349 aa13.96□□□□□ -0.17
DNMT1-218ENST00000589294 PRMT2P55345 433 aa13.96□□□□□ -0.17
DNMT1-218ENST00000589294 SAFBQ15424 915 aaKnown RBP eCLIP13.96□□□□□ -0.17
DNMT1-218ENST00000589294 KRT40Q6A162 431 aa13.96□□□□□ -0.17
DNMT1-218ENST00000589294 DPP9Q86TI2 863 aa13.96□□□□□ -0.17
DNMT1-218ENST00000589294 BLIDQ8IZY5 108 aa13.96□□□□□ -0.17
DNMT1-218ENST00000589294 CD99L2Q8TCZ2 262 aa13.96□□□□□ -0.17
DNMT1-218ENST00000589294 SYTL5Q8TDW5 730 aaPredicted RBP13.96□□□□□ -0.17
DNMT1-218ENST00000589294 SOCS4Q8WXH5 440 aa13.96□□□□□ -0.17
DNMT1-218ENST00000589294 USP6NLQ92738 828 aa13.96□□□□□ -0.17
DNMT1-218ENST00000589294 SHISA4Q96DD7 197 aa13.96□□□□□ -0.17
DNMT1-218ENST00000589294 NUDT12Q9BQG2 462 aa13.96□□□□□ -0.17
DNMT1-218ENST00000589294 FOXD4L1Q9NU39 408 aa13.96□□□□□ -0.17
DNMT1-218ENST00000589294 KCNJ14Q9UNX9 436 aa13.96□□□□□ -0.17
DNMT1-218ENST00000589294 SMCHD1A6NHR9 2005 aa13.96□□□□□ -0.17
DNMT1-218ENST00000589294 LOC102724159A0A0B4J2E5 919 aa13.95□□□□□ -0.18
DNMT1-218ENST00000589294 MMP1P03956 469 aa13.95□□□□□ -0.18
DNMT1-218ENST00000589294 HSPA8P11142 646 aaKnown RBP13.95□□□□□ -0.18
DNMT1-218ENST00000589294 XRCC5P13010 732 aaKnown RBP13.95□□□□□ -0.18
DNMT1-218ENST00000589294 CLK2P49760 499 aaKnown RBP13.95□□□□□ -0.18
DNMT1-218ENST00000589294 MAP2K5Q13163 448 aa13.95□□□□□ -0.18
DNMT1-218ENST00000589294 PWP2Q15269 919 aaKnown RBP13.95□□□□□ -0.18
DNMT1-218ENST00000589294 USP17L6PQ6QN14 398 aa13.95□□□□□ -0.18
DNMT1-218ENST00000589294 FAM133AQ8N9E0 248 aa13.95□□□□□ -0.18
DNMT1-218ENST00000589294 DNERQ8NFT8 737 aa13.95□□□□□ -0.18
DNMT1-218ENST00000589294 ARHGAP39Q9C0H5 1083 aa13.95□□□□□ -0.18
DNMT1-218ENST00000589294 BRMS1Q9HCU9 246 aa13.95□□□□□ -0.18
DNMT1-218ENST00000589294 GJB4Q9NTQ9 266 aa13.95□□□□□ -0.18
DNMT1-218ENST00000589294 ADD3Q9UEY8 706 aaKnown RBP13.95□□□□□ -0.18
DNMT1-218ENST00000589294 B4DLN1 442 aa13.94□□□□□ -0.18
DNMT1-218ENST00000589294 H3BQV1 296 aa13.94□□□□□ -0.18
DNMT1-218ENST00000589294 M0R2N6 131 aa13.94□□□□□ -0.18
DNMT1-218ENST00000589294 COBLO75128 1261 aa13.94□□□□□ -0.18
DNMT1-218ENST00000589294 PGK2P07205 417 aa13.94□□□□□ -0.18
DNMT1-218ENST00000589294 SYT1P21579 422 aa13.94□□□□□ -0.18
DNMT1-218ENST00000589294 HOXA13P31271 388 aaPredicted RBP13.94□□□□□ -0.18
DNMT1-218ENST00000589294 KRT2P35908 639 aa13.94□□□□□ -0.18
DNMT1-218ENST00000589294 RGS2P41220 211 aa13.94□□□□□ -0.18
DNMT1-218ENST00000589294 AP3B2Q13367 1082 aa13.94□□□□□ -0.18
DNMT1-218ENST00000589294 IRF5Q13568 498 aa13.94□□□□□ -0.18
DNMT1-218ENST00000589294 NPY5RQ15761 445 aa13.94□□□□□ -0.18
DNMT1-218ENST00000589294 ZNF792Q3KQV3 632 aa13.94□□□□□ -0.18
DNMT1-218ENST00000589294 IFFO2Q5TF58 517 aa13.94□□□□□ -0.18
DNMT1-218ENST00000589294 ZNF467Q7Z7K2 595 aaPredicted RBP13.94□□□□□ -0.18
DNMT1-218ENST00000589294 REXO1Q8N1G1 1221 aaKnown RBP13.94□□□□□ -0.18
DNMT1-218ENST00000589294 SPRYD3Q8NCJ5 442 aa13.94□□□□□ -0.18
DNMT1-218ENST00000589294 NSUN6Q8TEA1 469 aaKnown RBP13.94□□□□□ -0.18
DNMT1-218ENST00000589294 SRRDQ9UH36 339 aa13.94□□□□□ -0.18
DNMT1-218ENST00000589294 SPDYE3A6NKU9 549 aa13.93□□□□□ -0.18
DNMT1-218ENST00000589294 CNTN2Q02246 1040 aa13.93□□□□□ -0.18
DNMT1-218ENST00000589294 SLC30A10Q6XR72 485 aa13.93□□□□□ -0.18
DNMT1-218ENST00000589294 FCHSD1Q86WN1 690 aa13.93□□□□□ -0.18
DNMT1-218ENST00000589294 TRMT44Q8IYL2 757 aaKnown RBP13.93□□□□□ -0.18
DNMT1-218ENST00000589294 MSL3Q8N5Y2 521 aaKnown RBP13.93□□□□□ -0.18
DNMT1-218ENST00000589294 TAAR1Q96RJ0 339 aa13.93□□□□□ -0.18
DNMT1-218ENST00000589294 IWS1Q96ST2 819 aa13.93□□□□□ -0.18
DNMT1-218ENST00000589294 RMDN3Q96TC7 470 aa13.93□□□□□ -0.18
DNMT1-218ENST00000589294 MPHOSPH6Q99547 160 aaKnown RBP13.93□□□□□ -0.18
DNMT1-218ENST00000589294 FOXP1Q9H334 677 aaPredicted RBP13.93□□□□□ -0.18
DNMT1-218ENST00000589294 EHMT1Q9H9B1 1298 aa13.93□□□□□ -0.18
DNMT1-218ENST00000589294 BIN2Q9UBW5 565 aaPredicted RBP13.93□□□□□ -0.18
DNMT1-218ENST00000589294 PCDHA6Q9UN73 950 aa13.93□□□□□ -0.18
DNMT1-218ENST00000589294 PCDHA8Q9Y5H6 950 aa13.93□□□□□ -0.18
DNMT1-218ENST00000589294 SOWAHBA6NEL2 793 aa13.92□□□□□ -0.18
DNMT1-218ENST00000589294 BTBD18B2RXH4 712 aa13.92□□□□□ -0.18
DNMT1-218ENST00000589294 ECM2O94769 699 aaPredicted RBP13.92□□□□□ -0.18
DNMT1-218ENST00000589294 U2AF2P26368 475 aaKnown RBP eCLIP13.92□□□□□ -0.18
DNMT1-218ENST00000589294 FLT3LGP49771 235 aa13.92□□□□□ -0.18
DNMT1-218ENST00000589294 LBX1P52954 281 aa13.92□□□□□ -0.18
DNMT1-218ENST00000589294 CAP1Q01518 475 aa13.92□□□□□ -0.18
DNMT1-218ENST00000589294 GUCY1B3Q02153 619 aa13.92□□□□□ -0.18
DNMT1-218ENST00000589294 UBE2SQ16763 222 aa13.92□□□□□ -0.18
DNMT1-218ENST00000589294 XRRA1Q6P2D8 792 aa13.92□□□□□ -0.18
DNMT1-218ENST00000589294 KRT25Q7Z3Z0 450 aa13.92□□□□□ -0.18
DNMT1-218ENST00000589294 DIS3L2Q8IYB7 885 aaKnown RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms