RNA–Protein interactions for RNA: ENST00000588454.5

CALR-206, Transcript of calreticulin, humanhuman

TSL 3

Gene CALR, Length 776 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-206ENST00000588454 PHOSPHO2Q8TCD6 241 aa13.17□□□□□ -0.3
CALR-206ENST00000588454 LRRCC1Q9C099 1032 aa13.17□□□□□ -0.3
CALR-206ENST00000588454 ECHDC1Q9NTX5 307 aa13.17□□□□□ -0.3
CALR-206ENST00000588454 TRMT13Q9NUP7 481 aaKnown RBP13.17□□□□□ -0.3
CALR-206ENST00000588454 POLR3EQ9NVU0 708 aa13.17□□□□□ -0.3
CALR-206ENST00000588454 TNKSO95271 1327 aa13.16□□□□□ -0.3
CALR-206ENST00000588454 EPOPA6NHQ4 379 aa13.16□□□□□ -0.3
CALR-206ENST00000588454 SMARCA5O60264 1052 aaPredicted RBP13.16□□□□□ -0.3
CALR-206ENST00000588454 APPP05067 770 aa13.16□□□□□ -0.3
CALR-206ENST00000588454 ZFYP08048 801 aaPredicted RBP13.16□□□□□ -0.3
CALR-206ENST00000588454 ACTN1P12814 892 aa13.16□□□□□ -0.3
CALR-206ENST00000588454 MCCP23508 829 aa13.16□□□□□ -0.3
CALR-206ENST00000588454 RFC2P35250 354 aa13.16□□□□□ -0.3
CALR-206ENST00000588454 SLC1A4P43007 532 aa13.16□□□□□ -0.3
CALR-206ENST00000588454 TFAP4Q01664 338 aa13.16□□□□□ -0.3
CALR-206ENST00000588454 PDE4BQ07343 736 aa13.16□□□□□ -0.3
CALR-206ENST00000588454 RCSD1Q6JBY9 416 aa13.16□□□□□ -0.3
CALR-206ENST00000588454 DEFB128Q7Z7B8 93 aa13.16□□□□□ -0.3
CALR-206ENST00000588454 IFNL3Q8IZI9 196 aa13.16□□□□□ -0.3
CALR-206ENST00000588454 SLC9A7Q96T83 725 aa13.16□□□□□ -0.3
CALR-206ENST00000588454 CERS4Q9HA82 394 aa13.16□□□□□ -0.3
CALR-206ENST00000588454 SCN10AQ9Y5Y9 1956 aa13.16□□□□□ -0.3
CALR-206ENST00000588454 LCTP09848 1927 aa13.15□□□□□ -0.3
CALR-206ENST00000588454 TRIOO75962 3097 aa13.15□□□□□ -0.3
CALR-206ENST00000588454 LOC102724159A0A0B4J2E5 919 aa13.15□□□□□ -0.3
CALR-206ENST00000588454 RBM47A0AV96 593 aaKnown RBP13.15□□□□□ -0.3
CALR-206ENST00000588454 PURAQ00577 322 aaKnown RBP13.15□□□□□ -0.3
CALR-206ENST00000588454 TAP1Q03518 808 aa13.15□□□□□ -0.3
CALR-206ENST00000588454 IKQ13123 557 aaPredicted RBP13.15□□□□□ -0.3
CALR-206ENST00000588454 PWP2Q15269 919 aaKnown RBP13.15□□□□□ -0.3
CALR-206ENST00000588454 KRT40Q6A162 431 aa13.15□□□□□ -0.3
CALR-206ENST00000588454 PURBQ96QR8 312 aaKnown RBP13.15□□□□□ -0.3
CALR-206ENST00000588454 CHMP4BQ9H444 224 aaKnown RBP13.15□□□□□ -0.3
CALR-206ENST00000588454 PRR12Q9ULL5 1215 aa13.15□□□□□ -0.3
CALR-206ENST00000588454 ISY1Q9ULR0 285 aaKnown RBP13.15□□□□□ -0.3
CALR-206ENST00000588454 SUPT16HQ9Y5B9 1047 aaKnown RBP13.15□□□□□ -0.3
CALR-206ENST00000588454 TRIP12Q14669 1992 aaPredicted RBP13.14□□□□□ -0.31
CALR-206ENST00000588454 KIF28PB7ZC32 967 aa13.14□□□□□ -0.31
CALR-206ENST00000588454 M0R2C6 588 aa13.14□□□□□ -0.31
CALR-206ENST00000588454 PITPNM1O00562 1244 aa13.14□□□□□ -0.31
CALR-206ENST00000588454 ARHGEF15O94989 841 aa13.14□□□□□ -0.31
CALR-206ENST00000588454 CPT1AP50416 773 aa13.14□□□□□ -0.31
CALR-206ENST00000588454 SNAP25P60880 206 aa13.14□□□□□ -0.31
CALR-206ENST00000588454 NBPF20Q3BBV1 942 aa13.14□□□□□ -0.31
CALR-206ENST00000588454 PPP4R3BQ5MIZ7 849 aa13.14□□□□□ -0.31
CALR-206ENST00000588454 NSMFQ6X4W1 530 aa13.14□□□□□ -0.31
CALR-206ENST00000588454 KCTD1Q719H9 257 aa13.14□□□□□ -0.31
CALR-206ENST00000588454 HERC6Q8IVU3 1022 aa13.14□□□□□ -0.31
CALR-206ENST00000588454 HLA-CQ95604 372 aa13.14□□□□□ -0.31
CALR-206ENST00000588454 CHMP4CQ96CF2 233 aa13.14□□□□□ -0.31
CALR-206ENST00000588454 MTG1Q9BT17 334 aaPredicted RBP13.14□□□□□ -0.31
CALR-206ENST00000588454 WDR11Q9BZH6 1224 aa13.14□□□□□ -0.31
CALR-206ENST00000588454 NACAP1Q9BZK3 213 aa13.14□□□□□ -0.31
CALR-206ENST00000588454 ADD3Q9UEY8 706 aaKnown RBP13.14□□□□□ -0.31
CALR-206ENST00000588454 HCN4Q9Y3Q4 1203 aa13.14□□□□□ -0.31
CALR-206ENST00000588454 WDFY4Q6ZS81 3184 aa13.14□□□□□ -0.31
CALR-206ENST00000588454 GPR37L1O60883 481 aa13.13□□□□□ -0.31
CALR-206ENST00000588454 ICAM1P05362 532 aa13.13□□□□□ -0.31
CALR-206ENST00000588454 SLC3A2P08195 630 aaKnown RBP13.13□□□□□ -0.31
CALR-206ENST00000588454 MYL3P08590 195 aa13.13□□□□□ -0.31
CALR-206ENST00000588454 IQCF3P0C7M6 154 aa13.13□□□□□ -0.31
CALR-206ENST00000588454 RRP1P56182 461 aaKnown RBP13.13□□□□□ -0.31
CALR-206ENST00000588454 TMEM31Q5JXX7 168 aa13.13□□□□□ -0.31
CALR-206ENST00000588454 NFRKBQ6P4R8 1299 aa13.13□□□□□ -0.31
CALR-206ENST00000588454 RETREG2Q8NC44 543 aa13.13□□□□□ -0.31
CALR-206ENST00000588454 ARNTL2Q8WYA1 636 aa13.13□□□□□ -0.31
CALR-206ENST00000588454 GPHNQ9NQX3 736 aaPredicted RBP13.13□□□□□ -0.31
CALR-206ENST00000588454 IL17RBQ9NRM6 502 aa13.13□□□□□ -0.31
CALR-206ENST00000588454 CCPG1Q9ULG6 757 aa13.13□□□□□ -0.31
CALR-206ENST00000588454 KPNA6O60684 536 aa13.12□□□□□ -0.31
CALR-206ENST00000588454 LPXNO60711 386 aa13.12□□□□□ -0.31
CALR-206ENST00000588454 NOVP48745 357 aa13.12□□□□□ -0.31
CALR-206ENST00000588454 ALDH5A1P51649 535 aaPredicted RBP13.12□□□□□ -0.31
CALR-206ENST00000588454 PTPN11Q06124 597 aaPredicted RBP13.12□□□□□ -0.31
CALR-206ENST00000588454 PPARAQ07869 468 aa13.12□□□□□ -0.31
CALR-206ENST00000588454 GRB10Q13322 594 aa13.12□□□□□ -0.31
CALR-206ENST00000588454 BAATQ14032 418 aaPredicted RBP13.12□□□□□ -0.31
CALR-206ENST00000588454 FTOQ9C0B1 505 aaKnown RBP eCLIP13.12□□□□□ -0.312e-10■■■■□ 23.1
CALR-206ENST00000588454 LMCD1Q9NZU5 365 aa13.12□□□□□ -0.31
CALR-206ENST00000588454 STX8Q9UNK0 236 aa13.12□□□□□ -0.31
CALR-206ENST00000588454 A6NJR5 290 aa13.11□□□□□ -0.31
CALR-206ENST00000588454 NKRFO15226 690 aaKnown RBP eCLIP13.11□□□□□ -0.31
CALR-206ENST00000588454 BAIAP3O94812 1187 aa13.11□□□□□ -0.31
CALR-206ENST00000588454 IRX6P78412 446 aaPredicted RBP13.11□□□□□ -0.31
CALR-206ENST00000588454 BFSP2Q13515 415 aa13.11□□□□□ -0.31
CALR-206ENST00000588454 LRRFIP1Q32MZ4 808 aaKnown RBP13.11□□□□□ -0.31
CALR-206ENST00000588454 BRDTQ58F21 947 aaPredicted RBP13.11□□□□□ -0.31
CALR-206ENST00000588454 FAM47CQ5HY64 1035 aa13.11□□□□□ -0.31
CALR-206ENST00000588454 BTNL9Q6UXG8 535 aa13.11□□□□□ -0.31
CALR-206ENST00000588454 OR6J1Q8NGC5 347 aa13.11□□□□□ -0.31
CALR-206ENST00000588454 KHSRPQ92945 711 aaKnown RBP eCLIP13.11□□□□□ -0.31
CALR-206ENST00000588454 SEC62Q99442 399 aaKnown RBP13.11□□□□□ -0.31
CALR-206ENST00000588454 NAPBQ9H115 298 aa13.11□□□□□ -0.31
CALR-206ENST00000588454 RANBP17Q9H2T7 1088 aaKnown RBP13.11□□□□□ -0.31
CALR-206ENST00000588454 C11orf16Q9NQ32 467 aa13.11□□□□□ -0.31
CALR-206ENST00000588454 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.11□□□□□ -0.31
CALR-206ENST00000588454 NFIBO00712 420 aa13.1□□□□□ -0.31
CALR-206ENST00000588454 NMT2O60551 498 aa13.1□□□□□ -0.31
CALR-206ENST00000588454 TSHZ3Q63HK5 1081 aa13.1□□□□□ -0.31
CALR-206ENST00000588454 RASGRP2Q7LDG7 609 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms